RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	YCR061W	P25639	631 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	SUA7	P29055	345 aa	Predicted RBP	4.08	□□□□□ -1.76
SSB1	YDL229W	YBR053C	P38235	358 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	YPC1	P38298	316 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	PRS3	P38689	320 aa	Known RBP	4.08	□□□□□ -1.76
SSB1	YDL229W	AXL2	P38928	823 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	CKB2	P38930	258 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	PRP39	P39682	629 aa	Known RBP	4.08	□□□□□ -1.76
SSB1	YDL229W	POG1	P40473	351 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	YIL108W	P40483	696 aa	Known RBP	4.08	□□□□□ -1.76
SSB1	YDL229W	FMC1	P40491	155 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	SET4	P42948	560 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	TAX4	P47030	604 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	ZAP1	P47043	880 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	NOP19	P53317	196 aa	Predicted RBP	4.08	□□□□□ -1.76
SSB1	YDL229W	BUD32	P53323	261 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	TEP1	P53916	434 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	SLM2	P53955	656 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	NAN1	Q02931	896 aa	Known RBP	4.08	□□□□□ -1.76
SSB1	YDL229W	FMN1	Q03778	218 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	SEC13	Q04491	297 aa	Known RBP	4.08	□□□□□ -1.76
SSB1	YDL229W	GAL83	Q04739	417 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	HOF1	Q05080	669 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	ATG39	Q06159	398 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	EMG1	Q06287	252 aa	Known RBP	4.08	□□□□□ -1.76
SSB1	YDL229W	RDR1	Q08904	546 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	TPO4	Q12256	659 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	TY1A-BL	Q12266	440 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	GPM3	Q12326	303 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	YOL159C-A	Q3E769	90 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	TDH2	P00358	332 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
SSB1	YDL229W	TPI1	P00942	248 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	CAN1	P04817	590 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	TPK2	P06245	380 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	HEM13	P11353	328 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	GAP1	P19145	602 aa	Predicted RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	SAG1	P20840	650 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	OLE1	P21147	510 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	YCL068C	P25593	260 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	GMH1	P36125	273 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	YBR197C	P38306	217 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	ERG7	P38604	731 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	ARP1	P38696	384 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	YHK8	P38776	514 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	PFS1	P38872	237 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	GPI16	P38875	610 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	MLH1	P38920	769 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	NPP2	P39997	493 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	KRE29	P40026	464 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	PAN6	P40459	309 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	EFM3	P47163	339 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	YGL235W	P53071	178 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	MRH4	P53166	561 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	JAC1	P53193	184 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	BOR1	P53838	576 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	KTR5	P53966	522 aa	Predicted RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	RPS15	Q01855	142 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	YVH1	Q02256	364 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	SPP2	Q02521	185 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	CCE1	Q03702	353 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	TY1A-MR1	Q04215	440 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	RRP45	Q05636	305 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	ECM22	Q05958	814 aa	Predicted RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	YPR202W	Q08993	238 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	FSF1	Q12029	327 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	POM33	Q12164	279 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	JLP1	Q12358	412 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	RRI1	Q12468	440 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	MLP1	Q02455	1875 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	VPS63	O13549	108 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	QCR7	P00128	127 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	ADE4	P04046	510 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	HTS1	P07263	546 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	SNF4	P12904	322 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	PPH21	P23594	369 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	BDF1	P35817	686 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	ARN1	P38731	627 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	YAR028W	P39548	234 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	AFG3	P39925	761 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	BAP3	P41815	604 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	GLC8	P41818	229 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	MAF1	P41910	395 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	MOG1	P47123	218 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	SMX3	P54999	86 aa	Predicted RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	YPL067C	Q02754	198 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	YMR099C	Q03161	297 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	DIG2	Q03373	323 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	ECM30	Q06673	1274 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	SNX3	Q08826	162 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	YRA1	Q12159	226 aa	Known RBP	4.07	□□□□□ -1.76
SSB1	YDL229W	YLR108C	Q12259	485 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	PCC1	Q3E833	88 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	TY4B-J	P47024	1803 aa		4.07	□□□□□ -1.76
SSB1	YDL229W	FLP1	P03870	423 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	RHO2	P06781	192 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	PHO2	P07269	559 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	SPS2	P08459	502 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	CUP2	P15315	225 aa		4.06	□□□□□ -1.76
SSB1	YDL229W	PRE8	P23639	250 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 48.5 ms