RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W NCE101Q02820 53 aa1.51□□□□□ -2.17
TRM3YDL112W TVP15Q03860 143 aa1.51□□□□□ -2.17
TRM3YDL112W SWF1Q04629 336 aa1.51□□□□□ -2.17
TRM3YDL112W ARR3Q06598 404 aa1.51□□□□□ -2.17
TRM3YDL112W SEC16P48415 2195 aaKnown RBP1.51□□□□□ -2.17
TRM3YDL112W MET2P08465 486 aa1.51□□□□□ -2.17
TRM3YDL112W ERG9P29704 444 aa1.51□□□□□ -2.17
TRM3YDL112W YEF1P32622 495 aa1.51□□□□□ -2.17
TRM3YDL112W SOF1P33750 489 aaKnown RBP1.51□□□□□ -2.17
TRM3YDL112W VPS51P36116 164 aa1.51□□□□□ -2.17
TRM3YDL112W YBL029WP38201 376 aa1.51□□□□□ -2.17
TRM3YDL112W YDR476CQ03362 224 aa1.51□□□□□ -2.17
TRM3YDL112W GGA1Q06336 557 aa1.51□□□□□ -2.17
TRM3YDL112W ARR1Q06596 294 aa1.51□□□□□ -2.17
TRM3YDL112W BSC1Q12140 328 aa1.51□□□□□ -2.17
TRM3YDL112W PFK27Q12471 397 aaPredicted RBP1.51□□□□□ -2.17
TRM3YDL112W BLM10P43583 2143 aa1.51□□□□□ -2.17
TRM3YDL112W GPH1P06738 902 aaKnown RBP1.51□□□□□ -2.17
TRM3YDL112W PUT2P07275 575 aa1.51□□□□□ -2.17
TRM3YDL112W PET123P17558 318 aa1.51□□□□□ -2.17
TRM3YDL112W PTR2P32901 601 aa1.51□□□□□ -2.17
TRM3YDL112W SWH1P35845 1188 aa1.51□□□□□ -2.17
TRM3YDL112W TUL1P36096 758 aa1.51□□□□□ -2.17
TRM3YDL112W MRPL39P36533 70 aa1.51□□□□□ -2.17
TRM3YDL112W CBP4P37267 147 aa1.51□□□□□ -2.17
TRM3YDL112W FES1P38260 290 aa1.51□□□□□ -2.17
TRM3YDL112W ARN1P38731 627 aa1.51□□□□□ -2.17
TRM3YDL112W ANS1P38832 159 aa1.51□□□□□ -2.17
TRM3YDL112W PEX18P38855 283 aa1.51□□□□□ -2.17
TRM3YDL112W PSD1P39006 500 aa1.51□□□□□ -2.17
TRM3YDL112W ATF1P40353 525 aa1.51□□□□□ -2.17
TRM3YDL112W IAH1P41734 238 aa1.51□□□□□ -2.17
TRM3YDL112W YRB1P41920 201 aaKnown RBP1.51□□□□□ -2.17
TRM3YDL112W IGO1P53897 168 aa1.51□□□□□ -2.17
TRM3YDL112W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17not detected
TRM3YDL112W MMT1Q03218 510 aa1.51□□□□□ -2.17
TRM3YDL112W TAF12Q03761 539 aa1.51□□□□□ -2.17
TRM3YDL112W BUD22Q04347 519 aaKnown RBP1.51□□□□□ -2.17
TRM3YDL112W PAL1Q05518 499 aaKnown RBP1.51□□□□□ -2.17
TRM3YDL112W SWT1Q12104 458 aa1.51□□□□□ -2.17
TRM3YDL112W Q0297Q9ZZV8 51 aa1.51□□□□□ -2.17
TRM3YDL112W RPN13O13563 156 aa1.5□□□□□ -2.17
TRM3YDL112W CBP2P03874 630 aaPredicted RBP1.5□□□□□ -2.17
TRM3YDL112W YFR010W-AP0C5N0 62 aa1.5□□□□□ -2.17
TRM3YDL112W COS2P0CX12 379 aa1.5□□□□□ -2.17
TRM3YDL112W COS3P0CX13 379 aa1.5□□□□□ -2.17
TRM3YDL112W RPL42AP0CX27 106 aaKnown RBP1.5□□□□□ -2.17
TRM3YDL112W RPL42BP0CX28 106 aaKnown RBP1.5□□□□□ -2.17
TRM3YDL112W MAK32P23060 363 aa1.5□□□□□ -2.17
TRM3YDL112W RER1P25560 188 aa1.5□□□□□ -2.17
TRM3YDL112W ILV6P25605 309 aaKnown RBP1.5□□□□□ -2.17
TRM3YDL112W BUB2P26448 306 aaPredicted RBP1.5□□□□□ -2.17
TRM3YDL112W SSO1P32867 290 aa1.5□□□□□ -2.17
TRM3YDL112W HOT13P36078 116 aa1.5□□□□□ -2.17
TRM3YDL112W SDH8P38345 138 aa1.5□□□□□ -2.17
TRM3YDL112W TPA1P40032 644 aaKnown RBP1.5□□□□□ -2.17
TRM3YDL112W POP1P41812 875 aa1.5□□□□□ -2.17
TRM3YDL112W COS4P43542 379 aa1.5□□□□□ -2.17
TRM3YDL112W PTR3P43606 678 aa1.5□□□□□ -2.17
TRM3YDL112W AIF1P52923 378 aa1.5□□□□□ -2.17
TRM3YDL112W PCP1P53259 346 aa1.5□□□□□ -2.17
TRM3YDL112W SWP1Q02795 286 aa1.5□□□□□ -2.17
TRM3YDL112W YMR209CQ03648 457 aa1.5□□□□□ -2.17
TRM3YDL112W FAR10Q06001 478 aa1.5□□□□□ -2.17
TRM3YDL112W MCP1Q12106 302 aa1.5□□□□□ -2.17
TRM3YDL112W YMR085WP0CF18 432 aa1.5□□□□□ -2.17
TRM3YDL112W MCK1P21965 375 aaKnown RBP1.5□□□□□ -2.17
TRM3YDL112W PHO89P38361 574 aa1.5□□□□□ -2.17
TRM3YDL112W STP2P38704 541 aa1.5□□□□□ -2.17
TRM3YDL112W GAB1P41733 394 aa1.5□□□□□ -2.17
TRM3YDL112W SNO3P43544 222 aa1.5□□□□□ -2.17
TRM3YDL112W GTO1P48239 356 aa1.5□□□□□ -2.17
TRM3YDL112W LSG1P53145 640 aaKnown RBP1.5□□□□□ -2.17
TRM3YDL112W YGR066CP53242 292 aa1.5□□□□□ -2.17
TRM3YDL112W OGG1P53397 376 aaPredicted RBP1.5□□□□□ -2.17
TRM3YDL112W IZH1Q03419 316 aa1.5□□□□□ -2.17
TRM3YDL112W SEC13Q04491 297 aaKnown RBP1.5□□□□□ -2.17
TRM3YDL112W RRG7Q08774 242 aaPredicted RBP1.5□□□□□ -2.17
TRM3YDL112W JLP1Q12358 412 aa1.5□□□□□ -2.17
TRM3YDL112W SET6Q12529 373 aa1.5□□□□□ -2.17
TRM3YDL112W HEM4P06174 275 aa1.5□□□□□ -2.17
TRM3YDL112W PDX1P16451 410 aa1.5□□□□□ -2.17
TRM3YDL112W YPT7P32939 208 aa1.5□□□□□ -2.17
TRM3YDL112W DTR1P38125 572 aa1.5□□□□□ -2.17
TRM3YDL112W YBR096WP38256 230 aa1.5□□□□□ -2.17
TRM3YDL112W RRP4P38792 359 aaKnown RBP1.5□□□□□ -2.17
TRM3YDL112W LYS12P40495 371 aaKnown RBP1.5□□□□□ -2.17
TRM3YDL112W AZF1P41696 914 aa1.5□□□□□ -2.17
TRM3YDL112W DIA3P52290 468 aa1.5□□□□□ -2.17
TRM3YDL112W MPA43P53583 542 aaPredicted RBP1.5□□□□□ -2.17
TRM3YDL112W YPL107WQ02873 248 aa1.5□□□□□ -2.17
TRM3YDL112W YPL039WQ03080 316 aa1.5□□□□□ -2.17
TRM3YDL112W CSN9Q03981 162 aa1.5□□□□□ -2.17
TRM3YDL112W RIF2Q06208 395 aa1.5□□□□□ -2.17
TRM3YDL112W BAG7Q12128 409 aa1.5□□□□□ -2.17
TRM3YDL112W SAS5Q99314 248 aa1.5□□□□□ -2.17
TRM3YDL112W YCR051WP25631 222 aa1.49□□□□□ -2.17
TRM3YDL112W CUE2P36075 443 aaKnown RBP1.49□□□□□ -2.17
TRM3YDL112W YBR032WP38223 100 aa1.49□□□□□ -2.17
TRM3YDL112W APE4P38821 490 aa1.49□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms