RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W SOP4P39543 234 aaPredicted RBP2.08□□□□□ -2.08
MCD1YDL003W NPR2P39923 615 aa2.08□□□□□ -2.08
MCD1YDL003W AIM10P39965 576 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W RGI2P40188 164 aa2.08□□□□□ -2.08
MCD1YDL003W IMA5P40884 581 aa2.08□□□□□ -2.08
MCD1YDL003W ARF3P40994 183 aaRIP-Chip data2.08□□□□□ -2.08not detected
MCD1YDL003W NSE4P43124 402 aa2.08□□□□□ -2.08
MCD1YDL003W LOH1P47055 219 aa2.08□□□□□ -2.08
MCD1YDL003W MCM22P47167 239 aa2.08□□□□□ -2.08
MCD1YDL003W CCC1P47818 322 aa2.08□□□□□ -2.08
MCD1YDL003W YDL183CP48569 320 aa2.08□□□□□ -2.08
MCD1YDL003W RPL4BP49626 362 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W AZR1P50080 613 aa2.08□□□□□ -2.08
MCD1YDL003W PHB2P50085 310 aa2.08□□□□□ -2.08
MCD1YDL003W MRH4P53166 561 aa2.08□□□□□ -2.08
MCD1YDL003W YGR017WP53210 297 aa2.08□□□□□ -2.08
MCD1YDL003W KTR6P54070 446 aa2.08□□□□□ -2.08
MCD1YDL003W TIM8P57744 87 aa2.08□□□□□ -2.08
MCD1YDL003W ECM9Q02202 377 aa2.08□□□□□ -2.08
MCD1YDL003W MSC1Q03104 513 aa2.08□□□□□ -2.08
MCD1YDL003W SLD5Q03406 294 aa2.08□□□□□ -2.08
MCD1YDL003W YMR209CQ03648 457 aa2.08□□□□□ -2.08
MCD1YDL003W YDR387CQ04162 555 aa2.08□□□□□ -2.08
MCD1YDL003W RCO1Q04779 684 aa2.08□□□□□ -2.08
MCD1YDL003W CIA1Q05583 330 aa2.08□□□□□ -2.08
MCD1YDL003W GRC3Q07845 632 aa2.08□□□□□ -2.08
MCD1YDL003W YOL131WQ08270 108 aa2.08□□□□□ -2.08
MCD1YDL003W RRP40Q08285 240 aaKnown RBP2.08□□□□□ -2.08
MCD1YDL003W TCO89Q08921 799 aa2.08□□□□□ -2.08
MCD1YDL003W DDC1Q08949 612 aa2.08□□□□□ -2.08
MCD1YDL003W YPL257WQ08974 193 aa2.08□□□□□ -2.08
MCD1YDL003W NUS1Q12063 375 aa2.08□□□□□ -2.08
MCD1YDL003W APC9Q12107 265 aa2.08□□□□□ -2.08
MCD1YDL003W YGK3Q12222 375 aaPredicted RBP2.08□□□□□ -2.08
MCD1YDL003W YLR108CQ12259 485 aa2.08□□□□□ -2.08
MCD1YDL003W SFM1Q12314 213 aa2.08□□□□□ -2.08
MCD1YDL003W SKS1Q12505 502 aa2.08□□□□□ -2.08
MCD1YDL003W RIB3Q99258 208 aa2.08□□□□□ -2.08
MCD1YDL003W FAS2P19097 1887 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W TDH1P00360 332 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W GAL80P04387 435 aa2.07□□□□□ -2.08
MCD1YDL003W CAR2P07991 424 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W FUM1P08417 488 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W SSA3P09435 649 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W RPS18AP0CX55 146 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W RPS18BP0CX56 146 aaPredicted RBP2.07□□□□□ -2.08
MCD1YDL003W BAR1P12630 587 aa2.07□□□□□ -2.08
MCD1YDL003W REV1P12689 985 aa2.07□□□□□ -2.08
MCD1YDL003W APA1P16550 321 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W ZRC1P20107 442 aa2.07□□□□□ -2.08
MCD1YDL003W PRE1P22141 198 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W IDH1P28834 360 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
MCD1YDL003W SYN8P31377 255 aa2.07□□□□□ -2.08
MCD1YDL003W HEM12P32347 362 aaPredicted RBP2.07□□□□□ -2.08
MCD1YDL003W SCM4P32564 187 aa2.07□□□□□ -2.08
MCD1YDL003W CDC13P32797 924 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W SUI1P32911 108 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W SER1P33330 395 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W MRPL4P36517 319 aa2.07□□□□□ -2.08
MCD1YDL003W YBR063CP38083 404 aa2.07□□□□□ -2.08
MCD1YDL003W CHK1P38147 527 aa2.07□□□□□ -2.08
MCD1YDL003W YBL029WP38201 376 aa2.07□□□□□ -2.08
MCD1YDL003W TCM62P38228 572 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W LRP1P38801 184 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W FAD1P38913 306 aa2.07□□□□□ -2.08
MCD1YDL003W FET3P38993 636 aa2.07□□□□□ -2.08
MCD1YDL003W FLC2P39719 783 aa2.07□□□□□ -2.08
MCD1YDL003W HPA3P39979 161 aa2.07□□□□□ -2.08
MCD1YDL003W BUR6P40096 142 aa2.07□□□□□ -2.08
MCD1YDL003W MGS1P40151 587 aa2.07□□□□□ -2.08
MCD1YDL003W ALG8P40351 577 aa2.07□□□□□ -2.08
MCD1YDL003W ATM1P40416 690 aa2.07□□□□□ -2.08
MCD1YDL003W PKP1P40530 394 aa2.07□□□□□ -2.08
MCD1YDL003W ATG18P43601 500 aa2.07□□□□□ -2.08
MCD1YDL003W MRX5P47007 382 aa2.07□□□□□ -2.08
MCD1YDL003W AIM22P47051 409 aa2.07□□□□□ -2.08
MCD1YDL003W NSA1P53136 463 aaPredicted RBP2.07□□□□□ -2.08
MCD1YDL003W YGR042WP53227 271 aa2.07□□□□□ -2.08
MCD1YDL003W VOA1P53262 265 aa2.07□□□□□ -2.08
MCD1YDL003W YGR168CP53293 376 aa2.07□□□□□ -2.08
MCD1YDL003W ALG12P53730 551 aa2.07□□□□□ -2.08
MCD1YDL003W SAE3P89114 91 aa2.07□□□□□ -2.08
MCD1YDL003W TRM44Q02648 567 aaKnown RBP2.07□□□□□ -2.08
MCD1YDL003W YPL108WQ02872 168 aaPredicted RBP2.07□□□□□ -2.08
MCD1YDL003W YPL113CQ02961 396 aa2.07□□□□□ -2.08
MCD1YDL003W YDR131CQ03899 556 aa2.07□□□□□ -2.08
MCD1YDL003W YDR124WQ04608 324 aa2.07□□□□□ -2.08
MCD1YDL003W CDC123Q05791 360 aa2.07□□□□□ -2.08
MCD1YDL003W YLR455WQ06188 304 aa2.07□□□□□ -2.08
MCD1YDL003W GPI11Q06636 219 aa2.07□□□□□ -2.08
MCD1YDL003W RAD34Q06665 692 aa2.07□□□□□ -2.08
MCD1YDL003W PML1Q07930 204 aaPredicted RBP2.07□□□□□ -2.08
MCD1YDL003W ESA1Q08649 445 aa2.07□□□□□ -2.08
MCD1YDL003W SCP1Q08873 200 aa2.07□□□□□ -2.08
MCD1YDL003W FDH1Q08911 376 aa2.07□□□□□ -2.08
MCD1YDL003W AKR2Q12013 749 aa2.07□□□□□ -2.08
MCD1YDL003W HFI1Q12060 488 aa2.07□□□□□ -2.08
MCD1YDL003W HOS1Q12214 470 aa2.07□□□□□ -2.08
MCD1YDL003W NYV1Q12255 253 aa2.07□□□□□ -2.08
MCD1YDL003W RRP42Q12277 265 aaPredicted RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms