RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C YOR062CP36025 268 aa6.36□□□□□ -1.39
TDP1YBR223C LYS1P38998 373 aaRIP-Chip data6.36□□□□□ -1.39 RIP-Chip
TDP1YBR223C YAL037WP39728 267 aa6.36□□□□□ -1.39
TDP1YBR223C SER3P40054 469 aa6.36□□□□□ -1.39
TDP1YBR223C YGR210CP42942 411 aa6.36□□□□□ -1.39
TDP1YBR223C MDE1P47095 244 aa6.36□□□□□ -1.39
TDP1YBR223C FAA4P47912 694 aaKnown RBP6.36□□□□□ -1.39
TDP1YBR223C DML1Q03652 475 aa6.36□□□□□ -1.39
TDP1YBR223C YML108WQ03759 105 aa6.36□□□□□ -1.39
TDP1YBR223C YMR130WQ04223 302 aa6.36□□□□□ -1.39
TDP1YBR223C SEC13Q04491 297 aaKnown RBP6.36□□□□□ -1.39
TDP1YBR223C YMR252CQ04814 134 aa6.36□□□□□ -1.39
TDP1YBR223C YLR283WQ05867 314 aa6.36□□□□□ -1.39
TDP1YBR223C LEU9Q12166 604 aaKnown RBP6.36□□□□□ -1.39
TDP1YBR223C YOL107WQ12239 342 aa6.36□□□□□ -1.39
TDP1YBR223C GLO4Q12320 285 aa6.36□□□□□ -1.39
TDP1YBR223C QCR7P00128 127 aa6.36□□□□□ -1.39
TDP1YBR223C CAN1P04817 590 aa6.36□□□□□ -1.39
TDP1YBR223C CDC9P04819 755 aa6.36□□□□□ -1.39
TDP1YBR223C ERD2P18414 219 aa6.36□□□□□ -1.39
TDP1YBR223C PPH21P23594 369 aa6.36□□□□□ -1.39
TDP1YBR223C PRO1P32264 428 aa6.36□□□□□ -1.39
TDP1YBR223C RML2P32611 393 aa6.36□□□□□ -1.39
TDP1YBR223C MTH1P35198 433 aa6.36□□□□□ -1.39
TDP1YBR223C VPS51P36116 164 aa6.36□□□□□ -1.39
TDP1YBR223C FMP46P36141 133 aaKnown RBP6.36□□□□□ -1.39
TDP1YBR223C HTD2P38790 280 aaKnown RBP6.36□□□□□ -1.39
TDP1YBR223C MSS4P38994 779 aa6.36□□□□□ -1.39
TDP1YBR223C YNL195CP40168 261 aa6.36□□□□□ -1.39
TDP1YBR223C YIL166CP40445 542 aa6.36□□□□□ -1.39
TDP1YBR223C ICE2P40499 491 aa6.36□□□□□ -1.39
TDP1YBR223C BNA6P43619 295 aa6.36□□□□□ -1.39
TDP1YBR223C DPB11P47027 764 aaPredicted RBP6.36□□□□□ -1.39
TDP1YBR223C AIM25P47140 327 aa6.36□□□□□ -1.39
TDP1YBR223C YGR067CP53243 804 aa6.36□□□□□ -1.39
TDP1YBR223C VOA1P53262 265 aa6.36□□□□□ -1.39
TDP1YBR223C DID2P69771 204 aa6.36□□□□□ -1.39
TDP1YBR223C YDR444WQ04093 687 aa6.36□□□□□ -1.39
TDP1YBR223C YDL177CQ12257 170 aa6.36□□□□□ -1.39
TDP1YBR223C FRE6Q12473 712 aa6.36□□□□□ -1.39
TDP1YBR223C DET1Q99288 334 aaKnown RBP6.36□□□□□ -1.39
TDP1YBR223C PTP1P25044 335 aa6.35□□□□□ -1.39
TDP1YBR223C BOS1P25385 244 aa6.35□□□□□ -1.39
TDP1YBR223C IMG2P25642 146 aaPredicted RBP6.35□□□□□ -1.39
TDP1YBR223C MDL1P33310 695 aa6.35□□□□□ -1.39
TDP1YBR223C TAT1P38085 619 aa6.35□□□□□ -1.39
TDP1YBR223C IFA38P38286 347 aa6.35□□□□□ -1.39
TDP1YBR223C TRR2P38816 342 aa6.35□□□□□ -1.39
TDP1YBR223C MNL1P38888 796 aa6.35□□□□□ -1.39
TDP1YBR223C HRB1P38922 454 aaKnown RBP RIP-Chip data6.35□□□□□ -1.39not detected
TDP1YBR223C YIL108WP40483 696 aaKnown RBP6.35□□□□□ -1.39
TDP1YBR223C PKP1P40530 394 aa6.35□□□□□ -1.39
TDP1YBR223C ECM27P47144 725 aa6.35□□□□□ -1.39
TDP1YBR223C DOC1P53068 250 aa6.35□□□□□ -1.39
TDP1YBR223C MFB1Q04922 465 aa6.35□□□□□ -1.39
TDP1YBR223C YPR084WQ06821 456 aa6.35□□□□□ -1.39
TDP1YBR223C YPR091CQ06833 770 aa6.35□□□□□ -1.39
TDP1YBR223C YEH1Q07804 573 aa6.35□□□□□ -1.39
TDP1YBR223C BRX1Q08235 291 aaKnown RBP6.35□□□□□ -1.39
TDP1YBR223C SRO7Q12038 1033 aa6.35□□□□□ -1.39
TDP1YBR223C MRP1P10662 321 aaKnown RBP6.34□□□□□ -1.39
TDP1YBR223C RNA14P25298 677 aaKnown RBP6.34□□□□□ -1.39
TDP1YBR223C PUT3P25502 979 aaPredicted RBP6.34□□□□□ -1.39
TDP1YBR223C YCL002CP25565 263 aa6.34□□□□□ -1.39
TDP1YBR223C PAU2P32612 120 aa6.34□□□□□ -1.39
TDP1YBR223C PTR2P32901 601 aa6.34□□□□□ -1.39
TDP1YBR223C VPS17P32913 551 aa6.34□□□□□ -1.39
TDP1YBR223C SPT23P35210 1082 aa6.34□□□□□ -1.39
TDP1YBR223C RRF1P38771 230 aa6.34□□□□□ -1.39
TDP1YBR223C NAB3P38996 802 aaKnown RBP RIP-Chip data6.34□□□□□ -1.39not detected
TDP1YBR223C PRP39P39682 629 aaKnown RBP6.34□□□□□ -1.39
TDP1YBR223C PZF1P39933 429 aa6.34□□□□□ -1.39
TDP1YBR223C LRO1P40345 661 aa6.34□□□□□ -1.39
TDP1YBR223C RRD1P40454 393 aaKnown RBP6.34□□□□□ -1.39
TDP1YBR223C HIS6P40545 261 aa6.34□□□□□ -1.39
TDP1YBR223C SMK1P41808 388 aa6.34□□□□□ -1.39
TDP1YBR223C LEM3P42838 414 aa6.34□□□□□ -1.39
TDP1YBR223C SFH5P47008 294 aa6.34□□□□□ -1.39
TDP1YBR223C INP1Q03694 420 aa6.34□□□□□ -1.39
TDP1YBR223C HLR1Q04429 423 aa6.34□□□□□ -1.39
TDP1YBR223C SNO4Q04902 237 aa6.34□□□□□ -1.39
TDP1YBR223C RBS1Q05672 457 aaKnown RBP6.34□□□□□ -1.39
TDP1YBR223C SNT309Q06091 175 aaPredicted RBP6.34□□□□□ -1.39
TDP1YBR223C YOR378WQ08902 515 aa6.34□□□□□ -1.39
TDP1YBR223C HSP33Q08914 237 aaKnown RBP6.34□□□□□ -1.39
TDP1YBR223C HSP32Q08992 237 aa6.34□□□□□ -1.39
TDP1YBR223C BMT6Q12291 365 aa6.34□□□□□ -1.39
TDP1YBR223C TAO3P40468 2376 aa6.34□□□□□ -1.4
TDP1YBR223C SOD2P00447 233 aa6.33□□□□□ -1.4
TDP1YBR223C HAP4P14064 554 aa6.33□□□□□ -1.4
TDP1YBR223C YMC1P32331 307 aa6.33□□□□□ -1.4
TDP1YBR223C PDR3P33200 976 aa6.33□□□□□ -1.4
TDP1YBR223C LST4P34239 828 aa6.33□□□□□ -1.4
TDP1YBR223C BET3P36149 193 aa6.33□□□□□ -1.4
TDP1YBR223C NAT2P37293 288 aa6.33□□□□□ -1.4
TDP1YBR223C MAL32P38158 584 aa6.33□□□□□ -1.4
TDP1YBR223C YHR122WP38829 231 aa6.33□□□□□ -1.4
TDP1YBR223C PET100P38958 111 aa6.33□□□□□ -1.4
TDP1YBR223C PHO90P39535 881 aa6.33□□□□□ -1.4
TDP1YBR223C RFC4P40339 323 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms