RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C RPL40AP0CH08 128 aaKnown RBP5.2□□□□□ -1.58
PDB1YBR221C RPL40BP0CH09 128 aaKnown RBP5.2□□□□□ -1.58
PDB1YBR221C RAD57P25301 460 aa5.2□□□□□ -1.58
PDB1YBR221C VMA5P31412 392 aaKnown RBP5.2□□□□□ -1.58
PDB1YBR221C TCA17P32613 152 aa5.2□□□□□ -1.58
PDB1YBR221C VBA2P38358 474 aaKnown RBP5.2□□□□□ -1.58
PDB1YBR221C YHL012WP38709 493 aa5.2□□□□□ -1.58
PDB1YBR221C MBB1P39534 108 aa5.2□□□□□ -1.58
PDB1YBR221C NPT1P39683 429 aaKnown RBP5.2□□□□□ -1.58
PDB1YBR221C GET2P40056 285 aa5.2□□□□□ -1.58
PDB1YBR221C SLM1P40485 686 aa5.2□□□□□ -1.58
PDB1YBR221C COS4P43542 379 aa5.2□□□□□ -1.58
PDB1YBR221C YFR057WP43625 151 aa5.2□□□□□ -1.58
PDB1YBR221C HOC1P47124 396 aa5.2□□□□□ -1.58
PDB1YBR221C YGL235WP53071 178 aa5.2□□□□□ -1.58
PDB1YBR221C FHN1P53279 174 aa5.2□□□□□ -1.58
PDB1YBR221C GND2P53319 492 aa5.2□□□□□ -1.58
PDB1YBR221C ASI1P54074 624 aa5.2□□□□□ -1.58
PDB1YBR221C ERG13P54839 491 aaKnown RBP5.2□□□□□ -1.58
PDB1YBR221C NRG1Q03125 231 aa5.2□□□□□ -1.58
PDB1YBR221C OST6Q03723 332 aa5.2□□□□□ -1.58
PDB1YBR221C TY1A-DR2Q03964 440 aaKnown RBP5.2□□□□□ -1.58
PDB1YBR221C CSM3Q04659 317 aa5.2□□□□□ -1.58
PDB1YBR221C HCR1Q05775 265 aaKnown RBP5.2□□□□□ -1.58
PDB1YBR221C PLB3Q08108 686 aa5.2□□□□□ -1.58
PDB1YBR221C NSL1Q12143 216 aa5.2□□□□□ -1.58
PDB1YBR221C SFM1Q12314 213 aa5.2□□□□□ -1.58
PDB1YBR221C COX1P00401 534 aa5.19□□□□□ -1.58
PDB1YBR221C NHP6AP11632 93 aaKnown RBP5.19□□□□□ -1.58
PDB1YBR221C POP5P28005 173 aa5.19□□□□□ -1.58
PDB1YBR221C CYS4P32582 507 aaKnown RBP5.19□□□□□ -1.58
PDB1YBR221C TMT1P32643 299 aa5.19□□□□□ -1.58
PDB1YBR221C CLG1P35190 452 aa5.19□□□□□ -1.58
PDB1YBR221C HES1P35843 434 aa5.19□□□□□ -1.58
PDB1YBR221C RIB5P38145 238 aa5.19□□□□□ -1.58
PDB1YBR221C RFS1P38234 210 aaKnown RBP5.19□□□□□ -1.58
PDB1YBR221C ARP1P38696 384 aa5.19□□□□□ -1.58
PDB1YBR221C YPS6P40583 537 aa5.19□□□□□ -1.58
PDB1YBR221C PHO86P46956 311 aa5.19□□□□□ -1.58
PDB1YBR221C SFH5P47008 294 aa5.19□□□□□ -1.58
PDB1YBR221C YJR054WP47114 497 aa5.19□□□□□ -1.58
PDB1YBR221C CCC1P47818 322 aa5.19□□□□□ -1.58
PDB1YBR221C NAS6P50086 228 aa5.19□□□□□ -1.58
PDB1YBR221C MRPS35P53292 345 aa5.19□□□□□ -1.58
PDB1YBR221C MSC1Q03104 513 aa5.19□□□□□ -1.58
PDB1YBR221C YMR178WQ03219 274 aaKnown RBP5.19□□□□□ -1.58
PDB1YBR221C YDR109CQ04585 715 aa5.19□□□□□ -1.58
PDB1YBR221C BCH1Q05029 724 aa5.19□□□□□ -1.58
PDB1YBR221C RIF2Q06208 395 aa5.19□□□□□ -1.58
PDB1YBR221C MET32Q12041 191 aa5.19□□□□□ -1.58
PDB1YBR221C YPR022CQ12139 1133 aa5.19□□□□□ -1.58
PDB1YBR221C ARP6Q12509 438 aa5.19□□□□□ -1.58
PDB1YBR221C AI5_ALPHAQ9ZZX1 630 aa5.19□□□□□ -1.58
PDB1YBR221C RPS28BP0C0X0 67 aaKnown RBP5.18□□□□□ -1.58
PDB1YBR221C SAM35P14693 329 aa5.18□□□□□ -1.58
PDB1YBR221C FPS1P23900 669 aa5.18□□□□□ -1.58
PDB1YBR221C PTP1P25044 335 aa5.18□□□□□ -1.58
PDB1YBR221C CAM1P29547 415 aaKnown RBP5.18□□□□□ -1.58
PDB1YBR221C ITR2P30606 609 aa5.18□□□□□ -1.58
PDB1YBR221C NUP2P32499 720 aa5.18□□□□□ -1.58
PDB1YBR221C SOR1P35497 357 aaKnown RBP5.18□□□□□ -1.58
PDB1YBR221C ATG7P38862 630 aa5.18□□□□□ -1.58
PDB1YBR221C MOB1P40484 314 aa5.18□□□□□ -1.58
PDB1YBR221C IDP2P41939 412 aa5.18□□□□□ -1.58
PDB1YBR221C LYS20P48570 428 aaKnown RBP5.18□□□□□ -1.58
PDB1YBR221C SEH1P53011 349 aaKnown RBP5.18□□□□□ -1.58
PDB1YBR221C NIF3P53081 288 aa5.18□□□□□ -1.58
PDB1YBR221C CTK1Q03957 528 aaKnown RBP5.18□□□□□ -1.58
PDB1YBR221C SMP3Q04174 516 aa5.18□□□□□ -1.58
PDB1YBR221C SOR2Q07786 357 aa5.18□□□□□ -1.58
PDB1YBR221C RFU1Q08003 200 aa5.18□□□□□ -1.58
PDB1YBR221C SWM1Q12379 170 aa5.18□□□□□ -1.58
PDB1YBR221C RPS28AQ3E7X9 67 aaPredicted RBP5.18□□□□□ -1.58
PDB1YBR221C ATP6P00854 259 aa5.17□□□□□ -1.58
PDB1YBR221C NAM2P11325 894 aa5.17□□□□□ -1.58
PDB1YBR221C URA6P15700 204 aa5.17□□□□□ -1.58
PDB1YBR221C KGD2P19262 463 aaPredicted RBP5.17□□□□□ -1.58
PDB1YBR221C MAK31P23059 88 aa5.17□□□□□ -1.58
PDB1YBR221C RNA15P25299 296 aaPredicted RBP5.17□□□□□ -1.58
PDB1YBR221C PRX1P34227 261 aaKnown RBP5.17□□□□□ -1.58
PDB1YBR221C UPS2P35200 230 aa5.17□□□□□ -1.58
PDB1YBR221C MRX3P38172 270 aa5.17□□□□□ -1.58
PDB1YBR221C TSC10P38342 320 aa5.17□□□□□ -1.58
PDB1YBR221C RRP4P38792 359 aaKnown RBP5.17□□□□□ -1.58
PDB1YBR221C DDI1P40087 428 aa5.17□□□□□ -1.58
PDB1YBR221C ALG8P40351 577 aa5.17□□□□□ -1.58
PDB1YBR221C LYS12P40495 371 aaKnown RBP5.17□□□□□ -1.58
PDB1YBR221C YIR016WP40572 265 aa5.17□□□□□ -1.58
PDB1YBR221C CIN2P46670 268 aa5.17□□□□□ -1.58
PDB1YBR221C MOG1P47123 218 aa5.17□□□□□ -1.58
PDB1YBR221C AIM24P47127 394 aa5.17□□□□□ -1.58
PDB1YBR221C PRP24P49960 444 aaKnown RBP5.17□□□□□ -1.58
PDB1YBR221C ERG26P53199 349 aaKnown RBP5.17□□□□□ -1.58
PDB1YBR221C YTP1P53584 459 aa5.17□□□□□ -1.58
PDB1YBR221C TEX1P53851 422 aaKnown RBP5.17□□□□□ -1.58
PDB1YBR221C ATG4P53867 494 aa5.17□□□□□ -1.58
PDB1YBR221C SED5Q01590 340 aa5.17□□□□□ -1.58
PDB1YBR221C YPL068CQ02749 293 aa5.17□□□□□ -1.58
PDB1YBR221C SIZ1Q04195 904 aa5.17□□□□□ -1.58
PDB1YBR221C RNH203Q12338 110 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms