RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 ASTE1Q2TB18 679 aaPredicted RBP17.32■□□□□ 0.36
ATP2C1-224ENST00000533801 DDX42Q86XP3 938 aaKnown RBP eCLIP17.32■□□□□ 0.36
ATP2C1-224ENST00000533801 CNKSR2Q8WXI2 1034 aa17.32■□□□□ 0.36
ATP2C1-224ENST00000533801 DDX47Q9H0S4 455 aaKnown RBP17.32■□□□□ 0.36
ATP2C1-224ENST00000533801 RAB21Q9UL25 225 aa17.32■□□□□ 0.36
ATP2C1-224ENST00000533801 FOXN3O00409 490 aaPredicted RBP17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 KRT5P13647 590 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 GALCP54803 685 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 NAB2Q15742 525 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 PI4K2AQ9BTU6 479 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 OLFML3Q9NRN5 406 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 ZMYM2Q9UBW7 1377 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 RNF40O75150 1001 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 C2CD6Q53TS8 623 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 TRPM4Q8TD43 1214 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 CTNNBL1Q8WYA6 563 aaPredicted RBP17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 POMGNT1Q8WZA1 660 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 PPP1R9AQ9ULJ8 1098 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 FOCADQ5VW36 1801 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 DENND3A2RUS2 1198 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 PHF20L1A8MW92 1017 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 HNRNPDLO14979 420 aaKnown RBP17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 NR3C2P08235 984 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 BFSP1Q12934 665 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 PDCD2LQ9BRP1 358 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 PLCB1Q9NQ66 1216 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 CTTNBP2NLQ9P2B4 639 aa17.31■□□□□ 0.36
ATP2C1-224ENST00000533801 FRMPD4Q14CM0 1322 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 GOLGA6BA6NDN3 693 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 DDX3XO00571 662 aaKnown RBP eCLIP17.3■□□□□ 0.361e-8■■■■■ 28.7
ATP2C1-224ENST00000533801 CCNE2O96020 404 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 CARSP49589 748 aaKnown RBP17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 CETN1Q12798 172 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 SEZ6Q53EL9 994 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 DPH5Q9H2P9 285 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 SLC38A10Q9HBR0 1119 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 HSPBP1Q9NZL4 362 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 ANKRD65E5RJM6 399 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 ANKRD35Q8N283 1001 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 PRDM4Q9UKN5 801 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 STK24Q9Y6E0 443 aa17.3■□□□□ 0.36
ATP2C1-224ENST00000533801 VWA5AO00534 786 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 GLI1P08151 1106 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 PPP3CAQ08209 521 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 KMT5AQ9NQR1 393 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 TMOD4Q9NZQ9 345 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 CENPFP49454 3210 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 VAMP7P51809 220 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 CCNI2Q6ZMN8 369 aaPredicted RBP17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 ARHGEF19Q8IW93 802 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 AIPL1Q9NZN9 384 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 BCCIPQ9P287 314 aaKnown RBP eCLIP17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 ANKFY1Q9P2R3 1169 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 MARK3P27448 753 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 GJC1P36383 396 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 MAATS1Q7Z4T9 603 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 TMEM143Q96AN5 459 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 TEPSINQ96N21 525 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 ACCSQ96QU6 501 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 RIT2Q99578 217 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 STIM2Q9P246 746 aa17.29■□□□□ 0.36
ATP2C1-224ENST00000533801 SOX5P35711 763 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 DMP1Q13316 513 aaPredicted RBP17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 PHLDB3Q6NSJ2 640 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 ZNF280CQ8ND82 737 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 EDEM3Q9BZQ6 932 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 SIX2Q9NPC8 291 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 PXMP2Q9NR77 195 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 ANKRD63C9JTQ0 380 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 KRIT1O00522 736 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 MXI1P50539 228 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 BTBD6Q96KE9 485 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 WDR64B1ANS9 1081 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 F8VZ95 297 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 CTNND1O60716 968 aaKnown RBP17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 SMTNP53814 917 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 CNTN2Q02246 1040 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 MAPK7Q13164 816 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 BIRC3Q13489 604 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 MESDQ14696 234 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 ZFYVE27Q5T4F4 411 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 GADL1Q6ZQY3 521 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 XXYLT1Q8NBI6 393 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 DHX38Q92620 1227 aaKnown RBP17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 THAP2Q9H0W7 228 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 ZNF541Q9H0D2 1346 aa17.28■□□□□ 0.36
ATP2C1-224ENST00000533801 LRRIQ4A6NIV6 560 aa17.27■□□□□ 0.36
ATP2C1-224ENST00000533801 MAP2K7O14733 419 aa17.27■□□□□ 0.36
ATP2C1-224ENST00000533801 ITGA4P13612 1032 aa17.27■□□□□ 0.36
ATP2C1-224ENST00000533801 FERP16591 822 aa17.27■□□□□ 0.36
ATP2C1-224ENST00000533801 SSR1P43307 286 aaKnown RBP17.27■□□□□ 0.36
ATP2C1-224ENST00000533801 BACE1P56817 501 aa17.27■□□□□ 0.36
ATP2C1-224ENST00000533801 TMEM132AQ24JP5 1023 aa17.27■□□□□ 0.36
ATP2C1-224ENST00000533801 AADACL2Q6P093 401 aa17.27■□□□□ 0.36
ATP2C1-224ENST00000533801 NCAPG2Q86XI2 1143 aa17.27■□□□□ 0.36
ATP2C1-224ENST00000533801 LNX1Q8TBB1 728 aaPredicted RBP17.27■□□□□ 0.36
ATP2C1-224ENST00000533801 LPAR1Q92633 364 aa17.27■□□□□ 0.36
ATP2C1-224ENST00000533801 RPGRIP1Q96KN7 1286 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms