RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 KSR1Q8IVT5 923 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 ABI1Q8IZP0 508 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 PRPF31Q8WWY3 499 aaKnown RBP17.09■□□□□ 0.33
NUP50-204ENST00000417702 MTRQ99707 1265 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 AAASQ9NRG9 546 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 UNC80Q8N2C7 3258 aa17.09■□□□□ 0.33
NUP50-204ENST00000417702 RALGAPA2Q2PPJ7 1873 aa17.08■□□□□ 0.33
NUP50-204ENST00000417702 NLRC5Q86WI3 1866 aa17.08■□□□□ 0.33
NUP50-204ENST00000417702 CD2BP2O95400 341 aaKnown RBP17.08■□□□□ 0.32
NUP50-204ENST00000417702 SRGAP2CP0DJJ0 459 aa17.08■□□□□ 0.32
NUP50-204ENST00000417702 FGFR1P11362 822 aa17.08■□□□□ 0.32
NUP50-204ENST00000417702 XRCC6P12956 609 aaKnown RBP eCLIP17.08■□□□□ 0.32
NUP50-204ENST00000417702 LAMTOR4Q0VGL1 99 aa17.08■□□□□ 0.32
NUP50-204ENST00000417702 RNF169Q8NCN4 708 aa17.08■□□□□ 0.32
NUP50-204ENST00000417702 P2RX5Q93086 422 aa17.08■□□□□ 0.32
NUP50-204ENST00000417702 TMEM117Q9H0C3 514 aa17.08■□□□□ 0.32
NUP50-204ENST00000417702 NSUN3Q9H649 340 aaKnown RBP17.08■□□□□ 0.32
NUP50-204ENST00000417702 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.32
NUP50-204ENST00000417702 PCDHB12Q9Y5F1 795 aa17.08■□□□□ 0.32
NUP50-204ENST00000417702 TRANK1O15050 2925 aa17.08■□□□□ 0.32
NUP50-204ENST00000417702 NCOR1O75376 2440 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 A0A0U1RQF3 1178 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 GRM6O15303 877 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 DGAT1O75907 488 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 EOMESO95936 686 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 TFF2Q03403 129 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 MXD4Q14582 209 aaPredicted RBP17.07■□□□□ 0.32
NUP50-204ENST00000417702 MCTP1Q6DN14 999 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 TWF2Q6IBS0 349 aaKnown RBP17.07■□□□□ 0.32
NUP50-204ENST00000417702 SRGAP1Q7Z6B7 1085 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 FERMT3Q86UX7 667 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 BACH2Q9BYV9 841 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 IFT122Q9HBG6 1241 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 PLAGL2Q9UPG8 496 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 SMC3Q9UQE7 1217 aa17.07■□□□□ 0.32
NUP50-204ENST00000417702 PIN4Q9Y237 131 aaKnown RBP17.07■□□□□ 0.32
NUP50-204ENST00000417702 H3BQV1 296 aa17.06■□□□□ 0.32
NUP50-204ENST00000417702 SKIP12755 728 aa17.06■□□□□ 0.32
NUP50-204ENST00000417702 GJB2P29033 226 aa17.06■□□□□ 0.32
NUP50-204ENST00000417702 RARRES1P49788 294 aa17.06■□□□□ 0.32
NUP50-204ENST00000417702 TFDP1Q14186 410 aa17.06■□□□□ 0.32
NUP50-204ENST00000417702 TCEAL5Q5H9L2 206 aa17.06■□□□□ 0.32
NUP50-204ENST00000417702 CATSPER3Q86XQ3 398 aa17.06■□□□□ 0.32
NUP50-204ENST00000417702 KLHL23Q8NBE8 558 aa17.06■□□□□ 0.32
NUP50-204ENST00000417702 RNF149Q8NC42 400 aa17.06■□□□□ 0.32
NUP50-204ENST00000417702 PIGOQ8TEQ8 1089 aa17.06■□□□□ 0.32
NUP50-204ENST00000417702 NACC1Q96RE7 527 aa17.06■□□□□ 0.32
NUP50-204ENST00000417702 POLR3CQ9BUI4 534 aaPredicted RBP17.06■□□□□ 0.32
NUP50-204ENST00000417702 ALG13Q9NP73 1137 aaKnown RBP17.06■□□□□ 0.32
NUP50-204ENST00000417702 TYW1Q9NV66 732 aaKnown RBP17.06■□□□□ 0.32
NUP50-204ENST00000417702 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.06■□□□□ 0.32
NUP50-204ENST00000417702 ITGB1P05556 798 aa17.05■□□□□ 0.32
NUP50-204ENST00000417702 SPATA31C1P0DKV0 1188 aa17.05■□□□□ 0.32
NUP50-204ENST00000417702 LAG3P18627 525 aa17.05■□□□□ 0.32
NUP50-204ENST00000417702 PHKA2P46019 1235 aa17.05■□□□□ 0.32
NUP50-204ENST00000417702 NBR1Q14596 966 aa17.05■□□□□ 0.32
NUP50-204ENST00000417702 CSPP1Q1MSJ5 1256 aa17.05■□□□□ 0.32
NUP50-204ENST00000417702 HAUS3Q68CZ6 603 aa17.05■□□□□ 0.32
NUP50-204ENST00000417702 LRRC43Q8N309 656 aa17.05■□□□□ 0.32
NUP50-204ENST00000417702 TRAIPQ9BWF2 469 aa17.05■□□□□ 0.32
NUP50-204ENST00000417702 RAB34Q9BZG1 259 aa17.05■□□□□ 0.32
NUP50-204ENST00000417702 UBE2ZQ9H832 354 aaPredicted RBP17.05■□□□□ 0.32
NUP50-204ENST00000417702 XPNPEP1Q9NQW7 623 aa17.05■□□□□ 0.32
NUP50-204ENST00000417702 A0A087WWV3 80 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 NCK2O43639 380 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 MED24O75448 989 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 CSPG5O95196 566 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 RPA1P27694 616 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 TOB1P50616 345 aaPredicted RBP17.04■□□□□ 0.32
NUP50-204ENST00000417702 FXR2P51116 673 aaKnown RBP eCLIP17.04■□□□□ 0.32
NUP50-204ENST00000417702 RAB27AP51159 221 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 KCNQ1P51787 676 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 PTGDRQ13258 359 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 ZNF598Q86UK7 904 aaKnown RBP17.04■□□□□ 0.32
NUP50-204ENST00000417702 THNSL1Q8IYQ7 743 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 C4orf32Q8N8J7 132 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 SPPL3Q8TCT6 385 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 ADAMTS19Q8TE59 1207 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 PPP2R3CQ969Q6 453 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 CASD1Q96PB1 797 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 AGPAT5Q9NUQ2 364 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 RNF19AQ9NV58 838 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 DBR1Q9UK59 544 aaKnown RBP17.04■□□□□ 0.32
NUP50-204ENST00000417702 PCDHB6Q9Y5E3 794 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 STK24Q9Y6E0 443 aa17.04■□□□□ 0.32
NUP50-204ENST00000417702 LAD1O00515 517 aa17.03■□□□□ 0.32
NUP50-204ENST00000417702 USO1O60763 962 aaKnown RBP17.03■□□□□ 0.32
NUP50-204ENST00000417702 ERLIN2O94905 339 aa17.03■□□□□ 0.32
NUP50-204ENST00000417702 BMP1P13497 986 aa17.03■□□□□ 0.32
NUP50-204ENST00000417702 MUTP22033 750 aa17.03■□□□□ 0.32
NUP50-204ENST00000417702 NCBP1Q09161 790 aaKnown RBP17.03■□□□□ 0.32
NUP50-204ENST00000417702 PCBP1Q15365 356 aaKnown RBP eCLIP17.03■□□□□ 0.32
NUP50-204ENST00000417702 RILPL1Q5EBL4 403 aa17.03■□□□□ 0.32
NUP50-204ENST00000417702 EP400NLQ6ZTU2 488 aa17.03■□□□□ 0.32
NUP50-204ENST00000417702 COLGALT1Q8NBJ5 622 aa17.03■□□□□ 0.32
NUP50-204ENST00000417702 MCPH1Q8NEM0 835 aa17.03■□□□□ 0.32
NUP50-204ENST00000417702 POF1BQ8WVV4 589 aa17.03■□□□□ 0.32
NUP50-204ENST00000417702 RSPH1Q8WYR4 309 aa17.03■□□□□ 0.32
NUP50-204ENST00000417702 MRPL9Q9BYD2 267 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms