RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PLA2G3Q9NZ20 509 aa6.14□□□□□ -1.43
CLK1-203ENST00000409769 VWA7Q9Y334 891 aa6.14□□□□□ -1.43
CLK1-203ENST00000409769 CASKIN1Q8WXD9 1431 aa6.14□□□□□ -1.43
CLK1-203ENST00000409769 FYCO1Q9BQS8 1478 aa6.14□□□□□ -1.43
CLK1-203ENST00000409769 ABCA8O94911 1581 aa6.14□□□□□ -1.43
CLK1-203ENST00000409769 A0A087X0B3 334 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 NARSO43776 548 aaKnown RBP6.13□□□□□ -1.43
CLK1-203ENST00000409769 MPIG6BO95866 241 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 MC4RP32245 332 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 GYS2P54840 703 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 DPTQ07507 201 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 MOGSQ13724 837 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 NOLC1Q14978 699 aaKnown RBP eCLIP6.13□□□□□ -1.43
CLK1-203ENST00000409769 SEC23AQ15436 765 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 TBR1Q16650 682 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 PIK3R6Q5UE93 754 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 EGFLAMQ63HQ2 1017 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 CC2D1AQ6P1N0 951 aaPredicted RBP6.13□□□□□ -1.43
CLK1-203ENST00000409769 LARP4Q71RC2 724 aaKnown RBP eCLIP6.13□□□□□ -1.43
CLK1-203ENST00000409769 AMNQ9BXJ7 453 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 KIAA1683Q9H0B3 1180 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 CABP5Q9NP86 173 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 MAP3K1Q13233 1512 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 RAPGEF6Q8TEU7 1601 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 CFAP43Q8NDM7 1665 aa6.13□□□□□ -1.43
CLK1-203ENST00000409769 GSG1L2A8MUP6 293 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 SLC26A4O43511 780 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 CLSTN1O94985 981 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 HIBADHP31937 336 aaKnown RBP6.12□□□□□ -1.43
CLK1-203ENST00000409769 MSX2P35548 267 aaPredicted RBP6.12□□□□□ -1.43
CLK1-203ENST00000409769 SESN2P58004 480 aaPredicted RBP6.12□□□□□ -1.43
CLK1-203ENST00000409769 CD83Q01151 205 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 FOXL1Q12952 345 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 GRM7Q14831 915 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 HECW1Q76N89 1606 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 FILIP1Q7Z7B0 1213 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 DHX37Q8IY37 1157 aaKnown RBP6.12□□□□□ -1.43
CLK1-203ENST00000409769 ZNF808Q8N4W9 903 aaPredicted RBP6.12□□□□□ -1.43
CLK1-203ENST00000409769 IL17DQ8TAD2 202 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 CACTINQ8WUQ7 758 aaKnown RBP6.12□□□□□ -1.43
CLK1-203ENST00000409769 PLEKHG4BQ96PX9 1271 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 MPHOSPH9Q99550 1183 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 TLR9Q9NR96 1032 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 UCKL1Q9NWZ5 548 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 MAPRE3Q9UPY8 281 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 GIT1Q9Y2X7 761 aa6.12□□□□□ -1.43
CLK1-203ENST00000409769 TIAM1Q13009 1591 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 ARHGEF11O15085 1522 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 FOXP2O15409 715 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 HIP1RO75146 1068 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 F2P00734 622 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 APEX1P27695 318 aaKnown RBP6.11□□□□□ -1.43
CLK1-203ENST00000409769 FNTBP49356 437 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 INHBCP55103 352 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 IRF9Q00978 393 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 HGFACQ04756 655 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 TUBA3CQ13748 450 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 SMN1Q16637 294 aaKnown RBP6.11□□□□□ -1.43
CLK1-203ENST00000409769 C21orf62-AS1Q17RA5 79 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 FSTL4Q6MZW2 842 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 TUBA3EQ6PEY2 450 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 THEMISQ8N1K5 641 aaPredicted RBP6.11□□□□□ -1.43
CLK1-203ENST00000409769 ASB15Q8WXK1 588 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 GBP4Q96PP9 640 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 TARS2Q9BW92 718 aaKnown RBP6.11□□□□□ -1.43
CLK1-203ENST00000409769 TRIM8Q9BZR9 551 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 SLKQ9H2G2 1235 aaPredicted RBP6.11□□□□□ -1.43
CLK1-203ENST00000409769 CDC42EP3Q9UKI2 254 aa6.11□□□□□ -1.43
CLK1-203ENST00000409769 RIMBP3CA6NJZ7 1639 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 RIMBP3BA6NNM3 1639 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 RIMBP3Q9UFD9 1639 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 NUP153P49790 1475 aaKnown RBP6.1□□□□□ -1.43
CLK1-203ENST00000409769 PLB1Q6P1J6 1458 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 PTPRGP23470 1445 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 PTPDC1A2A3K4 754 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 SCDO00767 359 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 PLSCR1O15162 318 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 PEX11BO96011 259 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 MMEP08473 750 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 MAKP20794 623 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 INHBEP58166 350 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 DSG1Q02413 1049 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 CREB3L3Q68CJ9 461 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 SGMS1Q86VZ5 419 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 HIPK4Q8NE63 616 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 SHCBP1Q8NEM2 672 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 CHFRQ96EP1 664 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 ACSS2Q9NR19 701 aa6.1□□□□□ -1.43
CLK1-203ENST00000409769 ABCC2Q92887 1545 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 UHRF1BP1LA0JNW5 1464 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 UACAQ9BZF9 1416 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 KCNK3O14649 394 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 ADH4P08319 380 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 C1SP09871 688 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 CATSPEREQ5SY80 951 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 LRSAM1Q6UWE0 723 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 THNSL2Q86YJ6 484 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 GPR135Q8IZ08 494 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 D2HGDHQ8N465 521 aa6.09□□□□□ -1.43
CLK1-203ENST00000409769 RABGGTAQ92696 567 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms