RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR49, Length 165 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR49	snR49	ESS1	P22696	170 aa		4.9	□□□□□ -1.63
snR49	snR49	VAC17	P25591	423 aa		4.9	□□□□□ -1.63
snR49	snR49	GLN1	P32288	370 aa	Known RBP	4.9	□□□□□ -1.63
snR49	snR49	YJU3	P28321	313 aa		4.89	□□□□□ -1.63
snR49	snR49	YBL086C	P38177	466 aa		4.89	□□□□□ -1.63
snR49	snR49	AAD14	P42884	376 aa		4.89	□□□□□ -1.63
snR49	snR49	LSC2	P53312	427 aa		4.89	□□□□□ -1.63
snR49	snR49	ITT1	Q04638	464 aa		4.89	□□□□□ -1.63
snR49	snR49	ARG82	P07250	355 aa		4.88	□□□□□ -1.63
snR49	snR49	ATF2	P53296	535 aa		4.88	□□□□□ -1.63
snR49	snR49	RSC30	P38781	883 aa		4.87	□□□□□ -1.63
snR49	snR49	UBP2	Q01476	1272 aa		4.87	□□□□□ -1.63
snR49	snR49	DLD1	P32891	587 aa		4.86	□□□□□ -1.63
snR49	snR49	APP1	P53933	587 aa		4.86	□□□□□ -1.63
snR49	snR49	YJR098C	P47139	656 aa		4.85	□□□□□ -1.63
snR49	snR49	EMW1	P42842	904 aa	Known RBP	4.84	□□□□□ -1.63
snR49	snR49	TCB1	Q12466	1186 aa		4.84	□□□□□ -1.63
snR49	snR49	KTR1	P27810	393 aa	Known RBP	4.83	□□□□□ -1.64
snR49	snR49	OSH7	P38755	437 aa		4.82	□□□□□ -1.64
snR49	snR49	TY1A-MR1	Q04215	440 aa		4.82	□□□□□ -1.64
snR49	snR49	CCP1	P00431	361 aa		4.81	□□□□□ -1.64
snR49	snR49	GLC3	P32775	704 aa		4.81	□□□□□ -1.64
snR49	snR49	ROG3	P43602	733 aa		4.81	□□□□□ -1.64
snR49	snR49	YNR021W	P53723	404 aa	Known RBP	4.81	□□□□□ -1.64
snR49	snR49	FIG4	P42837	879 aa		4.8	□□□□□ -1.64
snR49	snR49	PKH3	Q03306	898 aa	Predicted RBP	4.8	□□□□□ -1.64
snR49	snR49	ICP55	P40051	511 aa		4.79	□□□□□ -1.64
snR49	snR49	YPR204W	Q08995	1032 aa		4.79	□□□□□ -1.64
snR49	snR49	ARG8	P18544	423 aa		4.78	□□□□□ -1.64
snR49	snR49	MKS1	P34072	584 aa		4.78	□□□□□ -1.64
snR49	snR49	DFG5	Q05031	458 aa		4.78	□□□□□ -1.64
snR49	snR49	DPH6	Q12429	685 aa		4.78	□□□□□ -1.64
snR49	snR49	NAM8	Q00539	523 aa	Known RBP	4.76	□□□□□ -1.65
snR49	snR49	CSN12	P47130	423 aa		4.75	□□□□□ -1.65
snR49	snR49	LYS5	P50113	272 aa		4.75	□□□□□ -1.65
snR49	snR49	MDJ1	P35191	511 aa		4.74	□□□□□ -1.65
snR49	snR49	BDS1	Q08347	646 aa		4.74	□□□□□ -1.65
snR49	snR49	CDC19	P00549	500 aa	Known RBP	4.73	□□□□□ -1.65
snR49	snR49	YPR084W	Q06821	456 aa		4.73	□□□□□ -1.65
snR49	snR49	PUS1	Q12211	544 aa	Known RBP	4.73	□□□□□ -1.65
snR49	snR49	STE6	P12866	1290 aa		4.72	□□□□□ -1.65
snR49	snR49	TEC1	P18412	486 aa		4.72	□□□□□ -1.65
snR49	snR49	FBP26	P32604	452 aa		4.72	□□□□□ -1.65
snR49	snR49	LSB3	P43603	459 aa	Known RBP	4.72	□□□□□ -1.65
snR49	snR49	JJJ3	P47138	172 aa		4.72	□□□□□ -1.65
snR49	snR49	AIM7	Q12156	149 aa		4.72	□□□□□ -1.65
snR49	snR49	RAD59	Q12223	238 aa		4.72	□□□□□ -1.65
snR49	snR49	PHM7	Q12252	991 aa		4.71	□□□□□ -1.66
snR49	snR49	VTC4	P47075	721 aa		4.69	□□□□□ -1.66
snR49	snR49	DAL1	P32375	460 aa		4.67	□□□□□ -1.66
snR49	snR49	YFL066C	P43538	392 aa		4.67	□□□□□ -1.66
snR49	snR49	NSG2	P53898	299 aa		4.67	□□□□□ -1.66
snR49	snR49	CUZ1	P53899	274 aa		4.67	□□□□□ -1.66
snR49	snR49	ISU1	Q03020	165 aa		4.67	□□□□□ -1.66
snR49	snR49	GUT2	P32191	649 aa		4.66	□□□□□ -1.66
snR49	snR49	ATG20	Q07528	640 aa		4.66	□□□□□ -1.66
snR49	snR49	THI72	Q08579	599 aa		4.66	□□□□□ -1.66
snR49	snR49	AI1	P03875	834 aa		4.64	□□□□□ -1.67
snR49	snR49	MAK16	P10962	306 aa	Predicted RBP	4.64	□□□□□ -1.67
snR49	snR49	CEM1	P39525	442 aa		4.63	□□□□□ -1.67
snR49	snR49	CCT8	P47079	568 aa	Known RBP	4.62	□□□□□ -1.67
snR49	snR49	FRA1	Q07825	749 aa		4.62	□□□□□ -1.67
snR49	snR49	DLD3	P39976	496 aa	Known RBP	4.61	□□□□□ -1.67
snR49	snR49	STE20	Q03497	939 aa	Known RBP	4.61	□□□□□ -1.67
snR49	snR49	SLA1	P32790	1244 aa		4.6	□□□□□ -1.67
snR49	snR49	NAF1	P53919	492 aa	Known RBP	4.6	□□□□□ -1.67
snR49	snR49	SYT1	Q06836	1226 aa		4.6	□□□□□ -1.67
snR49	snR49	DIT1	P21623	536 aa		4.59	□□□□□ -1.67
snR49	snR49	SSN3	P39073	555 aa		4.59	□□□□□ -1.67
snR49	snR49	UBP15	P50101	1230 aa		4.59	□□□□□ -1.67
snR49	snR49	YMR265C	Q03508	461 aa	Known RBP	4.59	□□□□□ -1.67
snR49	snR49	RPP2B	P02400	110 aa	Known RBP	4.58	□□□□□ -1.68
snR49	snR49	SSA2	P10592	639 aa	Known RBP	4.58	□□□□□ -1.68
snR49	snR49	MSN5	P52918	1224 aa		4.58	□□□□□ -1.68
snR49	snR49	WTM2	Q12206	467 aa		4.58	□□□□□ -1.68
snR49	snR49	SBE2	P42223	864 aa	Known RBP	4.57	□□□□□ -1.68
snR49	snR49	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
snR49	snR49	KRE33	P53914	1056 aa	Known RBP	4.57	□□□□□ -1.68
snR49	snR49	ADE12	P80210	433 aa	Known RBP	4.57	□□□□□ -1.68
snR49	snR49	TY1A-DR3	Q12441	440 aa		4.57	□□□□□ -1.68
snR49	snR49	APL6	P46682	809 aa		4.56	□□□□□ -1.68
snR49	snR49	YDR461C-A	Q2V2P7	80 aa		4.56	□□□□□ -1.68
snR49	snR49	YPR053C	Q6Q5F3	151 aa		4.56	□□□□□ -1.68
snR49	snR49	SPT2	P06843	333 aa	Predicted RBP	4.55	□□□□□ -1.68
snR49	snR49	KIN1	P13185	1064 aa		4.55	□□□□□ -1.68
snR49	snR49	DAT1	P13483	248 aa	Known RBP	4.55	□□□□□ -1.68
snR49	snR49	SKN7	P38889	622 aa		4.55	□□□□□ -1.68
snR49	snR49	EMP47	P43555	445 aa		4.55	□□□□□ -1.68
snR49	snR49	ISR1	Q06098	443 aa	Known RBP	4.55	□□□□□ -1.68
snR49	snR49	ISF1	P32488	338 aa		4.54	□□□□□ -1.68
snR49	snR49	TDA6	Q06466	467 aa		4.54	□□□□□ -1.68
snR49	snR49	UTR2	P32623	467 aa		4.53	□□□□□ -1.68
snR49	snR49	CSE4	P36012	229 aa		4.53	□□□□□ -1.68
snR49	snR49	MRX12	P47084	519 aa		4.53	□□□□□ -1.68
snR49	snR49	HAL5	P38970	855 aa	Known RBP	4.52	□□□□□ -1.69
snR49	snR49	UTP7	P40055	554 aa	Known RBP	4.52	□□□□□ -1.69
snR49	snR49	YMR187C	Q03236	431 aa		4.52	□□□□□ -1.69
snR49	snR49	AHP1	P38013	176 aa	Known RBP	4.51	□□□□□ -1.69
snR49	snR49	MCM16	Q12262	181 aa		4.51	□□□□□ -1.69
snR49	snR49	YDJ1	P25491	409 aa	Known RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms