RNA–Protein interactions for RNA: YPR178W

PRP4, Transcript of Splicing factor, yeastyeast

Gene PRP4, Length 1,398 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP4YPR178W ILV3P39522 585 aaKnown RBP12.29□□□□□ -0.44
PRP4YPR178W RRT14P40470 206 aa12.29□□□□□ -0.44
PRP4YPR178W BDH2P39713 417 aa12.28□□□□□ -0.44
PRP4YPR178W ZDS1P50111 915 aaKnown RBP12.28□□□□□ -0.44
PRP4YPR178W RSC1P53236 928 aa12.28□□□□□ -0.44
PRP4YPR178W RFC1P38630 861 aaKnown RBP12.27□□□□□ -0.45
PRP4YPR178W SRT1Q03175 343 aa12.27□□□□□ -0.45
PRP4YPR178W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.26□□□□□ -0.45not detected
PRP4YPR178W PRP43P53131 767 aaKnown RBP12.26□□□□□ -0.45
PRP4YPR178W CSI1Q04368 295 aa12.26□□□□□ -0.45
PRP4YPR178W GAS4Q08271 471 aa12.26□□□□□ -0.45
PRP4YPR178W BRN1P38170 754 aa12.25□□□□□ -0.45
PRP4YPR178W NMD2P38798 1089 aaKnown RBP12.25□□□□□ -0.45
PRP4YPR178W SPO1P53541 631 aa12.25□□□□□ -0.45
PRP4YPR178W ITT1Q04638 464 aa12.24□□□□□ -0.45
PRP4YPR178W RPS19AP07280 144 aaKnown RBP12.23□□□□□ -0.45
PRP4YPR178W RPS19BP07281 144 aaPredicted RBP12.23□□□□□ -0.45
PRP4YPR178W HST1P53685 503 aa12.23□□□□□ -0.45
PRP4YPR178W DPS1P04802 557 aaKnown RBP12.22□□□□□ -0.45
PRP4YPR178W RPS24AP0CX31 135 aaKnown RBP12.22□□□□□ -0.45
PRP4YPR178W RPS24BP0CX32 135 aaKnown RBP12.22□□□□□ -0.45
PRP4YPR178W RKM3P38222 552 aa12.22□□□□□ -0.45
PRP4YPR178W CIR1P42940 261 aa12.21□□□□□ -0.45
PRP4YPR178W NPA3P47122 385 aa12.21□□□□□ -0.45
PRP4YPR178W ROM2P51862 1356 aaKnown RBP12.21□□□□□ -0.45
PRP4YPR178W RNR2P09938 399 aaKnown RBP12.2□□□□□ -0.46
PRP4YPR178W NTH2P35172 780 aa12.2□□□□□ -0.46
PRP4YPR178W RPN12P32496 274 aa12.19□□□□□ -0.46
PRP4YPR178W HXT13P39924 564 aa12.19□□□□□ -0.46
PRP4YPR178W VPS20Q04272 221 aa12.19□□□□□ -0.46
PRP4YPR178W CDC16P09798 840 aa12.18□□□□□ -0.46
PRP4YPR178W HYR1P40581 163 aaKnown RBP12.18□□□□□ -0.46
PRP4YPR178W MDG1P53885 366 aa12.18□□□□□ -0.46
PRP4YPR178W ESC2Q06340 456 aa12.18□□□□□ -0.46
PRP4YPR178W AIM44Q99299 758 aa12.18□□□□□ -0.46
PRP4YPR178W BIK1P11709 440 aa12.18□□□□□ -0.46
PRP4YPR178W RVS167P39743 482 aaKnown RBP12.18□□□□□ -0.46
PRP4YPR178W RSM25P40496 264 aa12.18□□□□□ -0.46
PRP4YPR178W YNR029CP53729 429 aaKnown RBP12.18□□□□□ -0.46
PRP4YPR178W ADE6P38972 1358 aaKnown RBP12.17□□□□□ -0.46
PRP4YPR178W KEX1P09620 729 aa12.17□□□□□ -0.46
PRP4YPR178W YBR287WP38355 427 aa12.17□□□□□ -0.46
PRP4YPR178W HRQ1Q05549 1077 aa12.17□□□□□ -0.46
PRP4YPR178W APC1P53886 1748 aa12.17□□□□□ -0.46
PRP4YPR178W MIC60P36112 540 aa12.16□□□□□ -0.46
PRP4YPR178W BMS1Q08965 1183 aaKnown RBP12.16□□□□□ -0.46
PRP4YPR178W USO1P25386 1790 aa12.16□□□□□ -0.46
PRP4YPR178W MCM2P29469 868 aa12.15□□□□□ -0.46
PRP4YPR178W KRE33P53914 1056 aaKnown RBP12.15□□□□□ -0.46
PRP4YPR178W GCD7P32502 381 aaPredicted RBP12.14□□□□□ -0.47
PRP4YPR178W TPM2P40414 161 aa12.14□□□□□ -0.47
PRP4YPR178W HXT17P53631 564 aa12.14□□□□□ -0.47
PRP4YPR178W LYS2P07702 1392 aa12.13□□□□□ -0.47
PRP4YPR178W VAS1P07806 1104 aaKnown RBP12.13□□□□□ -0.47
PRP4YPR178W YGL081WP53156 320 aa12.13□□□□□ -0.47
PRP4YPR178W NOP8Q08287 484 aaPredicted RBP12.13□□□□□ -0.47
PRP4YPR178W HGH1P48362 394 aaKnown RBP12.12□□□□□ -0.47
PRP4YPR178W COQ4O13525 335 aa12.11□□□□□ -0.47
PRP4YPR178W TRL1P09880 827 aaKnown RBP12.11□□□□□ -0.47
PRP4YPR178W RPN1P38764 993 aaKnown RBP12.1□□□□□ -0.47
PRP4YPR178W KRI1P42846 591 aaKnown RBP12.1□□□□□ -0.47
PRP4YPR178W AOS1Q06624 347 aa12.09□□□□□ -0.47
PRP4YPR178W RAD24P32641 659 aa12.08□□□□□ -0.48
PRP4YPR178W CTF4Q01454 927 aa12.07□□□□□ -0.48
PRP4YPR178W APC11Q12157 165 aa12.07□□□□□ -0.48
PRP4YPR178W TAF13P11747 167 aa12.06□□□□□ -0.48
PRP4YPR178W HSP104P31539 908 aaKnown RBP12.06□□□□□ -0.48
PRP4YPR178W STU2P46675 888 aa12.06□□□□□ -0.48
PRP4YPR178W BDP1P46678 594 aa12.06□□□□□ -0.48
PRP4YPR178W HOS3Q02959 697 aaKnown RBP12.06□□□□□ -0.48
PRP4YPR178W NSE3Q05541 303 aa12.06□□□□□ -0.48
PRP4YPR178W BNI1P41832 1953 aa12.06□□□□□ -0.48
PRP4YPR178W MPE1P35728 441 aaKnown RBP12.05□□□□□ -0.48
PRP4YPR178W CWH41P53008 833 aa12.05□□□□□ -0.48
PRP4YPR178W TY1B-NL2Q99337 1749 aaKnown RBP12.05□□□□□ -0.48
PRP4YPR178W UGA3P26370 528 aa12.05□□□□□ -0.48
PRP4YPR178W TCD1P38756 429 aa12.05□□□□□ -0.48
PRP4YPR178W PEX19Q07418 342 aa12.05□□□□□ -0.48
PRP4YPR178W YOL057WQ08225 711 aa12.05□□□□□ -0.48
PRP4YPR178W CYC8P14922 966 aa12.04□□□□□ -0.48
PRP4YPR178W SIS2P36024 562 aa12.04□□□□□ -0.48
PRP4YPR178W MRP7P12687 371 aa12.03□□□□□ -0.48
PRP4YPR178W ELM1P32801 640 aa12.03□□□□□ -0.48
PRP4YPR178W DID4P36108 232 aa12.03□□□□□ -0.48
PRP4YPR178W MRPL10P36520 322 aa12.03□□□□□ -0.48
PRP4YPR178W BOI2P39969 1040 aa12.03□□□□□ -0.48
PRP4YPR178W YGR122WP53272 402 aa12.03□□□□□ -0.48
PRP4YPR178W MAK10Q02197 733 aa12.03□□□□□ -0.48
PRP4YPR178W ETT1Q08421 412 aaKnown RBP12.03□□□□□ -0.48
PRP4YPR178W FPR4Q06205 392 aaPredicted RBP12.02□□□□□ -0.49
PRP4YPR178W RPL19AP0CX82 189 aaKnown RBP12.01□□□□□ -0.49
PRP4YPR178W RPL19BP0CX83 189 aaPredicted RBP12.01□□□□□ -0.49
PRP4YPR178W PBY1P38254 753 aa12.01□□□□□ -0.49
PRP4YPR178W CCT5P40413 562 aaKnown RBP12□□□□□ -0.49
PRP4YPR178W YGR130CP53278 816 aa11.99□□□□□ -0.49
PRP4YPR178W YRF1-2P40105 1681 aa11.99□□□□□ -0.49
PRP4YPR178W PEX14P53112 341 aa11.98□□□□□ -0.49
PRP4YPR178W YDR306CQ06640 478 aa11.98□□□□□ -0.49
PRP4YPR178W RIM20Q12033 661 aa11.97□□□□□ -0.49
PRP4YPR178W RAD4P14736 754 aa11.96□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 79.5 ms