RNA–Protein interactions for RNA: YPR039W

YPR039W, Transcript of Dubious open reading frame, yeast

Gene YPR039W, Length 336 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPR039W	YPR039W	RAD59	Q12223	238 aa		5.51	□□□□□ -1.53
YPR039W	YPR039W	YDL176W	Q12027	708 aa		5.49	□□□□□ -1.53
YPR039W	YPR039W	SRF1	Q12516	437 aa		5.49	□□□□□ -1.53
YPR039W	YPR039W	FIG4	P42837	879 aa		5.47	□□□□□ -1.53
YPR039W	YPR039W	OPT2	Q06593	877 aa		5.47	□□□□□ -1.53
YPR039W	YPR039W	YBL086C	P38177	466 aa		5.45	□□□□□ -1.54
YPR039W	YPR039W	LEU3	P08638	886 aa		5.44	□□□□□ -1.54
YPR039W	YPR039W	GUA1	P38625	525 aa	Known RBP	5.44	□□□□□ -1.54
YPR039W	YPR039W	CAF120	P53836	1060 aa		5.44	□□□□□ -1.54
YPR039W	YPR039W	EMW1	P42842	904 aa	Known RBP	5.42	□□□□□ -1.54
YPR039W	YPR039W	NUP85	P46673	744 aa		5.42	□□□□□ -1.54
YPR039W	YPR039W	DLD1	P32891	587 aa		5.41	□□□□□ -1.54
YPR039W	YPR039W	AAD14	P42884	376 aa		5.41	□□□□□ -1.54
YPR039W	YPR039W	YLR346C	Q06139	101 aa		5.41	□□□□□ -1.54
YPR039W	YPR039W	SSA2	P10592	639 aa	Known RBP	5.4	□□□□□ -1.54
YPR039W	YPR039W	TEC1	P18412	486 aa		5.4	□□□□□ -1.54
YPR039W	YPR039W	YPR084W	Q06821	456 aa		5.4	□□□□□ -1.54
YPR039W	YPR039W	ARG82	P07250	355 aa		5.39	□□□□□ -1.55
YPR039W	YPR039W	MAK16	P10962	306 aa	Predicted RBP	5.39	□□□□□ -1.55
YPR039W	YPR039W	RPN1	P38764	993 aa	Known RBP	5.39	□□□□□ -1.55
YPR039W	YPR039W	ACO2	P39533	789 aa		5.39	□□□□□ -1.55
YPR039W	YPR039W	DFG5	Q05031	458 aa		5.39	□□□□□ -1.55
YPR039W	YPR039W	MIP1	P15801	1254 aa		5.38	□□□□□ -1.55
YPR039W	YPR039W	MKS1	P34072	584 aa		5.38	□□□□□ -1.55
YPR039W	YPR039W	GLY1	P37303	387 aa	Known RBP	5.37	□□□□□ -1.55
YPR039W	YPR039W	RTT106	P40161	455 aa		5.37	□□□□□ -1.55
YPR039W	YPR039W	YIR007W	P40566	764 aa		5.37	□□□□□ -1.55
YPR039W	YPR039W	LSC2	P53312	427 aa		5.37	□□□□□ -1.55
YPR039W	YPR039W	TY1A-BL	Q12266	440 aa		5.37	□□□□□ -1.55
YPR039W	YPR039W	SCW11	P53189	542 aa		5.36	□□□□□ -1.55
YPR039W	YPR039W	YJR098C	P47139	656 aa		5.35	□□□□□ -1.55
YPR039W	YPR039W	TCB1	Q12466	1186 aa		5.35	□□□□□ -1.55
YPR039W	YPR039W	GUT2	P32191	649 aa		5.34	□□□□□ -1.55
YPR039W	YPR039W	ISF1	P32488	338 aa		5.34	□□□□□ -1.55
YPR039W	YPR039W	PKC1	P24583	1151 aa		5.33	□□□□□ -1.56
YPR039W	YPR039W	UBP2	Q01476	1272 aa		5.33	□□□□□ -1.56
YPR039W	YPR039W	BDS1	Q08347	646 aa		5.33	□□□□□ -1.56
YPR039W	YPR039W	YDJ1	P25491	409 aa	Known RBP	5.32	□□□□□ -1.56
YPR039W	YPR039W	FBP26	P32604	452 aa		5.32	□□□□□ -1.56
YPR039W	YPR039W	TFB3	Q03290	321 aa		5.32	□□□□□ -1.56
YPR039W	YPR039W	STE20	Q03497	939 aa	Known RBP	5.32	□□□□□ -1.56
YPR039W	YPR039W	ATG20	Q07528	640 aa		5.32	□□□□□ -1.56
YPR039W	YPR039W	STE6	P12866	1290 aa		5.3	□□□□□ -1.56
YPR039W	YPR039W	YBL036C	P38197	257 aa		5.3	□□□□□ -1.56
YPR039W	YPR039W	EMP47	P43555	445 aa		5.3	□□□□□ -1.56
YPR039W	YPR039W	OSH7	P38755	437 aa		5.29	□□□□□ -1.56
YPR039W	YPR039W	NAF1	P53919	492 aa	Known RBP	5.29	□□□□□ -1.56
YPR039W	YPR039W	HPC2	Q01448	625 aa		5.29	□□□□□ -1.56
YPR039W	YPR039W	ISU1	Q03020	165 aa		5.29	□□□□□ -1.56
YPR039W	YPR039W	HPF1	Q05164	967 aa		5.29	□□□□□ -1.56
YPR039W	YPR039W	FRA1	Q07825	749 aa		5.29	□□□□□ -1.56
YPR039W	YPR039W	CSE4	P36012	229 aa		5.28	□□□□□ -1.56
YPR039W	YPR039W	YGR035C	P53222	116 aa		5.28	□□□□□ -1.56
YPR039W	YPR039W	ROG3	P43602	733 aa		5.27	□□□□□ -1.57
YPR039W	YPR039W	TRK2	P28584	889 aa		5.26	□□□□□ -1.57
YPR039W	YPR039W	BRL1	P38770	471 aa		5.26	□□□□□ -1.57
YPR039W	YPR039W	TY1A-MR1	Q04215	440 aa		5.26	□□□□□ -1.57
YPR039W	YPR039W	ISR1	Q06098	443 aa	Known RBP	5.26	□□□□□ -1.57
YPR039W	YPR039W	MCM16	Q12262	181 aa		5.26	□□□□□ -1.57
YPR039W	YPR039W	CCP1	P00431	361 aa		5.25	□□□□□ -1.57
YPR039W	YPR039W	BIO2	P32451	375 aa		5.25	□□□□□ -1.57
YPR039W	YPR039W	NAM8	Q00539	523 aa	Known RBP	5.25	□□□□□ -1.57
YPR039W	YPR039W	YNL108C	P53929	270 aa		5.24	□□□□□ -1.57
YPR039W	YPR039W	HAL5	P38970	855 aa	Known RBP	5.23	□□□□□ -1.57
YPR039W	YPR039W	CDC19	P00549	500 aa	Known RBP	5.22	□□□□□ -1.57
YPR039W	YPR039W	DAT1	P13483	248 aa	Known RBP	5.22	□□□□□ -1.57
YPR039W	YPR039W	APL6	P46682	809 aa		5.22	□□□□□ -1.57
YPR039W	YPR039W	WTM2	Q12206	467 aa		5.22	□□□□□ -1.57
YPR039W	YPR039W	ENO2	P00925	437 aa	Known RBP	5.21	□□□□□ -1.58
YPR039W	YPR039W	SPT5	P27692	1063 aa	Known RBP	5.21	□□□□□ -1.58
YPR039W	YPR039W	DLD3	P39976	496 aa	Known RBP	5.21	□□□□□ -1.58
YPR039W	YPR039W	SOH1	P38633	127 aa		5.2	□□□□□ -1.58
YPR039W	YPR039W	YJL007C	P47080	104 aa		5.2	□□□□□ -1.58
YPR039W	YPR039W	SUP45	P12385	437 aa	Known RBP	5.19	□□□□□ -1.58
YPR039W	YPR039W	DAL1	P32375	460 aa		5.19	□□□□□ -1.58
YPR039W	YPR039W	UTR2	P32623	467 aa		5.19	□□□□□ -1.58
YPR039W	YPR039W	UTP7	P40055	554 aa	Known RBP	5.19	□□□□□ -1.58
YPR039W	YPR039W	SSN3	P39073	555 aa		5.18	□□□□□ -1.58
YPR039W	YPR039W	MRX12	P47084	519 aa		5.18	□□□□□ -1.58
YPR039W	YPR039W	VTC4	P47075	721 aa		5.17	□□□□□ -1.58
YPR039W	YPR039W	SPT2	P06843	333 aa	Predicted RBP	5.16	□□□□□ -1.58
YPR039W	YPR039W	CUZ1	P53899	274 aa		5.16	□□□□□ -1.58
YPR039W	YPR039W	HDA3	Q06623	655 aa		5.16	□□□□□ -1.58
YPR039W	YPR039W	TY1A-DR3	Q12441	440 aa		5.16	□□□□□ -1.58
YPR039W	YPR039W	RPP2B	P02400	110 aa	Known RBP	5.15	□□□□□ -1.59
YPR039W	YPR039W	SLA1	P32790	1244 aa		5.15	□□□□□ -1.59
YPR039W	YPR039W	RDS2	P19541	446 aa	Known RBP	5.14	□□□□□ -1.59
YPR039W	YPR039W	MDJ1	P35191	511 aa		5.14	□□□□□ -1.59
YPR039W	YPR039W	TBS1	P38114	1094 aa		5.14	□□□□□ -1.59
YPR039W	YPR039W	DPH6	Q12429	685 aa		5.14	□□□□□ -1.59
YPR039W	YPR039W	BIM1	P40013	344 aa		5.13	□□□□□ -1.59
YPR039W	YPR039W	SLX8	P40072	274 aa		5.13	□□□□□ -1.59
YPR039W	YPR039W	ATG32	P40458	529 aa		5.13	□□□□□ -1.59
YPR039W	YPR039W	ALA1	P40825	983 aa	Known RBP	5.13	□□□□□ -1.59
YPR039W	YPR039W	RIM21	P48565	533 aa		5.13	□□□□□ -1.59
YPR039W	YPR039W	LYS5	P50113	272 aa		5.13	□□□□□ -1.59
YPR039W	YPR039W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	5.13	□□□□□ -1.59	not detected
YPR039W	YPR039W	YPP1	P46951	817 aa		5.12	□□□□□ -1.59
YPR039W	YPR039W	MSN5	P52918	1224 aa		5.12	□□□□□ -1.59
YPR039W	YPR039W	SUM1	P46676	1062 aa		5.11	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms