RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W ETT1Q08421 412 aaKnown RBP4.71□□□□□ -1.66
SRO7YPR032W NUP145P49687 1317 aa4.71□□□□□ -1.66
SRO7YPR032W DEP1P31385 405 aa4.7□□□□□ -1.66
SRO7YPR032W SWE1P32944 819 aa4.7□□□□□ -1.66
SRO7YPR032W HYR1P40581 163 aaKnown RBP4.7□□□□□ -1.66
SRO7YPR032W ORC1P54784 914 aaPredicted RBP4.7□□□□□ -1.66
SRO7YPR032W YEF3P16521 1044 aaKnown RBP4.7□□□□□ -1.66
SRO7YPR032W PSK1P31374 1356 aa4.7□□□□□ -1.66
SRO7YPR032W CLB1P24868 471 aa4.7□□□□□ -1.66
SRO7YPR032W RPN12P32496 274 aa4.7□□□□□ -1.66
SRO7YPR032W YNL050CP53952 270 aa4.7□□□□□ -1.66
SRO7YPR032W KRE5P22023 1365 aa4.69□□□□□ -1.66
SRO7YPR032W RAD51P25454 400 aa4.69□□□□□ -1.66
SRO7YPR032W COG8Q04632 607 aa4.69□□□□□ -1.66
SRO7YPR032W DRS2P39524 1355 aa4.68□□□□□ -1.66
SRO7YPR032W TRK1P12685 1235 aa4.68□□□□□ -1.66
SRO7YPR032W HST1P53685 503 aa4.68□□□□□ -1.66
SRO7YPR032W YMR102CQ03177 834 aa4.68□□□□□ -1.66
SRO7YPR032W NUP188P52593 1655 aaKnown RBP4.68□□□□□ -1.66
SRO7YPR032W RVS167P39743 482 aaKnown RBP4.68□□□□□ -1.66
SRO7YPR032W NNF2P53253 936 aa4.68□□□□□ -1.66
SRO7YPR032W UTP13Q05946 817 aaKnown RBP4.68□□□□□ -1.66
SRO7YPR032W RRP15Q06511 250 aaPredicted RBP4.68□□□□□ -1.66
SRO7YPR032W LYS2P07702 1392 aa4.67□□□□□ -1.66
SRO7YPR032W RAD3P06839 778 aa4.67□□□□□ -1.66
SRO7YPR032W SAP155P43612 1002 aa4.67□□□□□ -1.66
SRO7YPR032W YGL140CP53120 1219 aa4.67□□□□□ -1.66
SRO7YPR032W UBP10P53874 792 aaPredicted RBP4.67□□□□□ -1.66
SRO7YPR032W SFI1Q12369 946 aa4.67□□□□□ -1.66
SRO7YPR032W SCT1P32784 759 aa4.67□□□□□ -1.66
SRO7YPR032W RTT107P38850 1070 aa4.67□□□□□ -1.66
SRO7YPR032W MPP10P47083 593 aaKnown RBP4.67□□□□□ -1.66
SRO7YPR032W YNL035CP53962 389 aaKnown RBP4.67□□□□□ -1.66
SRO7YPR032W RPN7Q06103 429 aaKnown RBP4.67□□□□□ -1.66
SRO7YPR032W SEC39Q12745 709 aa4.66□□□□□ -1.66
SRO7YPR032W KEX1P09620 729 aa4.66□□□□□ -1.66
SRO7YPR032W CYC8P14922 966 aa4.66□□□□□ -1.66
SRO7YPR032W RRP46P53256 223 aaPredicted RBP4.66□□□□□ -1.66
SRO7YPR032W ECM16Q04217 1267 aaKnown RBP4.66□□□□□ -1.66
SRO7YPR032W MDG1P53885 366 aa4.66□□□□□ -1.66
SRO7YPR032W HEF3P53978 1044 aaKnown RBP4.66□□□□□ -1.66
SRO7YPR032W HRQ1Q05549 1077 aa4.66□□□□□ -1.66
SRO7YPR032W PSH1Q12161 406 aa4.66□□□□□ -1.66
SRO7YPR032W BNR1P40450 1375 aa4.65□□□□□ -1.66
SRO7YPR032W SWH1P35845 1188 aa4.65□□□□□ -1.66
SRO7YPR032W MIC60P36112 540 aa4.65□□□□□ -1.66
SRO7YPR032W NPA3P47122 385 aa4.65□□□□□ -1.66
SRO7YPR032W ERV41Q04651 352 aa4.65□□□□□ -1.66
SRO7YPR032W FKH1P40466 484 aa4.65□□□□□ -1.67
SRO7YPR032W VPS41P38959 992 aa4.64□□□□□ -1.67
SRO7YPR032W MVP1P40959 511 aaKnown RBP4.64□□□□□ -1.67
SRO7YPR032W VPS30Q02948 557 aa4.64□□□□□ -1.67
SRO7YPR032W ORM2Q06144 216 aa4.64□□□□□ -1.67
SRO7YPR032W YRF1-2P40105 1681 aa4.64□□□□□ -1.67
SRO7YPR032W PET111P08468 800 aa4.64□□□□□ -1.67
SRO7YPR032W MRC1P25588 1096 aa4.64□□□□□ -1.67
SRO7YPR032W RTG3P38165 486 aa4.64□□□□□ -1.67
SRO7YPR032W BUD21Q08492 214 aaPredicted RBP4.64□□□□□ -1.67
SRO7YPR032W ESL2P36168 1195 aa4.63□□□□□ -1.67
SRO7YPR032W PXR1P53335 271 aaPredicted RBP4.63□□□□□ -1.67
SRO7YPR032W APC1P53886 1748 aa4.63□□□□□ -1.67
SRO7YPR032W TAF13P11747 167 aa4.63□□□□□ -1.67
SRO7YPR032W RIO2P40160 425 aaKnown RBP4.63□□□□□ -1.67
SRO7YPR032W DAL5P15365 543 aa4.63□□□□□ -1.67
SRO7YPR032W RIM101P33400 625 aa4.63□□□□□ -1.67
SRO7YPR032W YMR1P47147 688 aaKnown RBP RIP-Chip data4.63□□□□□ -1.67not detected
SRO7YPR032W TAF5P38129 798 aa4.62□□□□□ -1.67
SRO7YPR032W RSM25P40496 264 aa4.62□□□□□ -1.67
SRO7YPR032W DOS2P54858 310 aa4.62□□□□□ -1.67
SRO7YPR032W GCR2Q01722 534 aa4.62□□□□□ -1.67
SRO7YPR032W PUS1Q12211 544 aaKnown RBP4.62□□□□□ -1.67
SRO7YPR032W RAD50P12753 1312 aa4.62□□□□□ -1.67
SRO7YPR032W DLD1P32891 587 aa4.62□□□□□ -1.67
SRO7YPR032W TIF4632P39936 914 aaKnown RBP4.62□□□□□ -1.67
SRO7YPR032W THI22Q06490 572 aa4.62□□□□□ -1.67
SRO7YPR032W STE11P23561 717 aa4.61□□□□□ -1.67
SRO7YPR032W SPT5P27692 1063 aaKnown RBP4.61□□□□□ -1.67
SRO7YPR032W PSE1P32337 1089 aaKnown RBP4.61□□□□□ -1.67
SRO7YPR032W CBF5P33322 483 aaKnown RBP RIP-Chip data4.61□□□□□ -1.67not detected
SRO7YPR032W MRPL10P36520 322 aa4.61□□□□□ -1.67
SRO7YPR032W CWH41P53008 833 aa4.61□□□□□ -1.67
SRO7YPR032W YVC1Q12324 675 aa4.61□□□□□ -1.67
SRO7YPR032W YGL082WP53155 381 aa4.61□□□□□ -1.67
SRO7YPR032W YKL068W-AQ3E826 78 aa4.61□□□□□ -1.67
SRO7YPR032W URB1P34241 1764 aaKnown RBP4.61□□□□□ -1.67
SRO7YPR032W TY1B-NL2Q99337 1749 aaKnown RBP4.61□□□□□ -1.67
SRO7YPR032W RAD16P31244 790 aa4.61□□□□□ -1.67
SRO7YPR032W ELM1P32801 640 aa4.61□□□□□ -1.67
SRO7YPR032W GRX3Q03835 250 aa4.61□□□□□ -1.67
SRO7YPR032W SPB4P25808 606 aaPredicted RBP4.6□□□□□ -1.67
SRO7YPR032W ZUO1P32527 433 aaKnown RBP4.6□□□□□ -1.67
SRO7YPR032W TIM50Q02776 476 aa4.6□□□□□ -1.67
SRO7YPR032W YRF1-1P0CX20 1796 aa4.6□□□□□ -1.67
SRO7YPR032W YRF1-5P0CX21 1796 aa4.6□□□□□ -1.67
SRO7YPR032W YRF1-8P0CX22 1796 aa4.6□□□□□ -1.67
SRO7YPR032W TRL1P09880 827 aaKnown RBP4.6□□□□□ -1.67
SRO7YPR032W SEC7P11075 2009 aaKnown RBP4.6□□□□□ -1.67
SRO7YPR032W UTP10P42945 1769 aaKnown RBP4.6□□□□□ -1.67
SRO7YPR032W ALD3P54114 506 aa4.59□□□□□ -1.67
SRO7YPR032W COG4Q06096 861 aa4.59□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 29.5 ms