RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W TEC1P18412 486 aa5.98□□□□□ -1.45
UBP16YPL072W UGA3P26370 528 aa5.98□□□□□ -1.45
UBP16YPL072W NAF1P53919 492 aaKnown RBP5.98□□□□□ -1.45
UBP16YPL072W TFB3Q03290 321 aa5.98□□□□□ -1.45
UBP16YPL072W LEO1P38439 464 aa5.97□□□□□ -1.45
UBP16YPL072W MET22P32179 357 aa5.96□□□□□ -1.46
UBP16YPL072W EMW1P42842 904 aaKnown RBP5.96□□□□□ -1.46
UBP16YPL072W YPR084WQ06821 456 aa5.96□□□□□ -1.46
UBP16YPL072W ENV9Q08651 330 aa5.95□□□□□ -1.46
UBP16YPL072W YBL086CP38177 466 aa5.94□□□□□ -1.46
UBP16YPL072W YBL036CP38197 257 aa5.94□□□□□ -1.46
UBP16YPL072W ITT1Q04638 464 aa5.94□□□□□ -1.46
UBP16YPL072W SPT5P27692 1063 aaKnown RBP5.94□□□□□ -1.46
UBP16YPL072W GUT2P32191 649 aa5.94□□□□□ -1.46
UBP16YPL072W PTK2P47116 818 aaKnown RBP5.94□□□□□ -1.46
UBP16YPL072W APP1P53933 587 aa5.94□□□□□ -1.46
UBP16YPL072W PKC1P24583 1151 aa5.93□□□□□ -1.46
UBP16YPL072W YDR444WQ04093 687 aa5.93□□□□□ -1.46
UBP16YPL072W SRF1Q12516 437 aa5.92□□□□□ -1.46
UBP16YPL072W GAR1P28007 205 aaKnown RBP5.91□□□□□ -1.46
UBP16YPL072W LCB5Q06147 687 aaKnown RBP5.91□□□□□ -1.46
UBP16YPL072W FRA1Q07825 749 aa5.91□□□□□ -1.46
UBP16YPL072W STE20Q03497 939 aaKnown RBP5.9□□□□□ -1.46
UBP16YPL072W MKS1P34072 584 aa5.89□□□□□ -1.47
UBP16YPL072W NUP85P46673 744 aa5.89□□□□□ -1.47
UBP16YPL072W ARG82P07250 355 aa5.88□□□□□ -1.47
UBP16YPL072W YDJ1P25491 409 aaKnown RBP5.88□□□□□ -1.47
UBP16YPL072W MRX12P47084 519 aa5.88□□□□□ -1.47
UBP16YPL072W HGH1P48362 394 aaKnown RBP5.88□□□□□ -1.47
UBP16YPL072W GBP2P25555 427 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
UBP16YPL072W BIO2P32451 375 aa5.87□□□□□ -1.47
UBP16YPL072W AAD14P42884 376 aa5.87□□□□□ -1.47
UBP16YPL072W YLR346CQ06139 101 aa5.87□□□□□ -1.47
UBP16YPL072W MCM16Q12262 181 aa5.87□□□□□ -1.47
UBP16YPL072W FBP26P32604 452 aa5.86□□□□□ -1.47
UBP16YPL072W EMP47P43555 445 aa5.85□□□□□ -1.47
UBP16YPL072W YPL062WQ02781 134 aa5.85□□□□□ -1.47
UBP16YPL072W DFG5Q05031 458 aa5.85□□□□□ -1.47
UBP16YPL072W OPT2Q06593 877 aa5.85□□□□□ -1.47
UBP16YPL072W ATG20Q07528 640 aa5.85□□□□□ -1.47
UBP16YPL072W SUP45P12385 437 aaKnown RBP5.84□□□□□ -1.47
UBP16YPL072W STE6P12866 1290 aa5.84□□□□□ -1.48
UBP16YPL072W ISF1P32488 338 aa5.84□□□□□ -1.48
UBP16YPL072W APL6P46682 809 aa5.84□□□□□ -1.48
UBP16YPL072W YPP1P46951 817 aa5.84□□□□□ -1.48
UBP16YPL072W BDS1Q08347 646 aa5.84□□□□□ -1.48
UBP16YPL072W GLY1P37303 387 aaKnown RBP5.83□□□□□ -1.48
UBP16YPL072W YJL007CP47080 104 aa5.83□□□□□ -1.48
UBP16YPL072W LSC2P53312 427 aa5.83□□□□□ -1.48
UBP16YPL072W YNL108CP53929 270 aa5.83□□□□□ -1.48
UBP16YPL072W ISU1Q03020 165 aa5.83□□□□□ -1.48
UBP16YPL072W MIP1P15801 1254 aa5.81□□□□□ -1.48
UBP16YPL072W YDL176WQ12027 708 aa5.81□□□□□ -1.48
UBP16YPL072W ENO2P00925 437 aaKnown RBP5.8□□□□□ -1.48
UBP16YPL072W DLD1P32891 587 aa5.8□□□□□ -1.48
UBP16YPL072W ACO2P39533 789 aa5.8□□□□□ -1.48
UBP16YPL072W YJR098CP47139 656 aa5.8□□□□□ -1.48
UBP16YPL072W RPP2BP02400 110 aaKnown RBP5.79□□□□□ -1.48
UBP16YPL072W SCW11P53189 542 aa5.79□□□□□ -1.48
UBP16YPL072W UBP2Q01476 1272 aa5.79□□□□□ -1.48
UBP16YPL072W BIM1P40013 344 aa5.79□□□□□ -1.48
UBP16YPL072W ATG3P40344 310 aa5.79□□□□□ -1.48
UBP16YPL072W UTP13Q05946 817 aaKnown RBP5.79□□□□□ -1.48
UBP16YPL072W ISR1Q06098 443 aaKnown RBP5.79□□□□□ -1.48
UBP16YPL072W TY1A-BLQ12266 440 aa5.79□□□□□ -1.48
UBP16YPL072W RIM21P48565 533 aa5.78□□□□□ -1.48
UBP16YPL072W TCB1Q12466 1186 aa5.77□□□□□ -1.49
UBP16YPL072W SPT2P06843 333 aaPredicted RBP5.76□□□□□ -1.49
UBP16YPL072W ATG32P40458 529 aa5.76□□□□□ -1.49
UBP16YPL072W CAF120P53836 1060 aa5.76□□□□□ -1.49
UBP16YPL072W TIF1P10081 395 aaKnown RBP5.75□□□□□ -1.49
UBP16YPL072W SOH1P38633 127 aa5.74□□□□□ -1.49
UBP16YPL072W HAL5P38970 855 aaKnown RBP5.74□□□□□ -1.49
UBP16YPL072W DLD3P39976 496 aaKnown RBP5.74□□□□□ -1.49
UBP16YPL072W UTR2P32623 467 aa5.74□□□□□ -1.49
UBP16YPL072W RPL34BP40525 121 aaKnown RBP5.74□□□□□ -1.49
UBP16YPL072W VTC4P47075 721 aa5.74□□□□□ -1.49
UBP16YPL072W MRX10Q05648 414 aa5.74□□□□□ -1.49
UBP16YPL072W RDS2P19541 446 aaKnown RBP5.73□□□□□ -1.49
UBP16YPL072W RTG2P32608 588 aaKnown RBP5.73□□□□□ -1.49
UBP16YPL072W OSH7P38755 437 aa5.73□□□□□ -1.49
UBP16YPL072W DMA2P53924 522 aa5.73□□□□□ -1.49
UBP16YPL072W WTM2Q12206 467 aa5.73□□□□□ -1.49
UBP16YPL072W DAT1P13483 248 aaKnown RBP5.72□□□□□ -1.49
UBP16YPL072W YIR007WP40566 764 aa5.72□□□□□ -1.49
UBP16YPL072W ENO1P00924 437 aaKnown RBP5.71□□□□□ -1.5
UBP16YPL072W HDA3Q06623 655 aa5.71□□□□□ -1.5
UBP16YPL072W DAL1P32375 460 aa5.7□□□□□ -1.5
UBP16YPL072W TBS1P38114 1094 aa5.7□□□□□ -1.5
UBP16YPL072W SLX8P40072 274 aa5.69□□□□□ -1.5
UBP16YPL072W ROG3P43602 733 aa5.69□□□□□ -1.5
UBP16YPL072W MSN5P52918 1224 aa5.69□□□□□ -1.5
UBP16YPL072W TY1A-MR1Q04215 440 aa5.69□□□□□ -1.5
UBP16YPL072W CDC19P00549 500 aaKnown RBP5.68□□□□□ -1.5
UBP16YPL072W SSN3P39073 555 aa5.68□□□□□ -1.5
UBP16YPL072W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
UBP16YPL072W PEP12P32854 288 aa5.66□□□□□ -1.5
UBP16YPL072W SUM1P46676 1062 aa5.66□□□□□ -1.5
UBP16YPL072W YPR204WQ08995 1032 aa5.66□□□□□ -1.5
UBP16YPL072W UTP7P40055 554 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms