RNA–Protein interactions for RNA: YNL329C

PEX6, Transcript of AAA-peroxin, yeast

Gene PEX6, Length 3,093 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX6	YNL329C	YPR097W	Q06839	1073 aa		4.92	□□□□□ -1.62
PEX6	YNL329C	BUD20	Q08004	166 aa	Predicted RBP	4.92	□□□□□ -1.62
PEX6	YNL329C	SEC2	P17065	759 aa		4.92	□□□□□ -1.62
PEX6	YNL329C	SPT16	P32558	1035 aa	Known RBP	4.92	□□□□□ -1.62
PEX6	YNL329C	AGE1	Q04412	482 aa		4.92	□□□□□ -1.62
PEX6	YNL329C	YDR344C	Q05510	147 aa		4.92	□□□□□ -1.62
PEX6	YNL329C	PUN1	Q06991	263 aa		4.92	□□□□□ -1.62
PEX6	YNL329C	TY1A-DR4	O74302	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-H	P0C2I4	478 aa	Known RBP	4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-A	P0CX57	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-PR1	P0CX58	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-OR	P0CX59	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-PR2	P0CX60	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-DR5	P0CX65	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-ER2	P0CX66	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-GR3	P0CX67	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-LR1	P0CX68	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-MR2	P0CX69	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	ERP5	P38819	212 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-JR2	P47099	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-DR1	Q03856	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-ML1	Q04706	440 aa	Known RBP	4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-BR	Q12217	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-NL2	Q12470	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	TY1A-GR2	Q12485	440 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	PRT1	P06103	763 aa	Known RBP	4.91	□□□□□ -1.62
PEX6	YNL329C	ARH1	P48360	493 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	FRA1	Q07825	749 aa		4.91	□□□□□ -1.62
PEX6	YNL329C	PDC1	P06169	563 aa	Known RBP	4.9	□□□□□ -1.62
PEX6	YNL329C	MIP1	P15801	1254 aa		4.9	□□□□□ -1.62
PEX6	YNL329C	HAP4	P14064	554 aa		4.9	□□□□□ -1.63
PEX6	YNL329C	PHO87	P25360	923 aa		4.9	□□□□□ -1.63
PEX6	YNL329C	ACS2	P52910	683 aa	Known RBP	4.9	□□□□□ -1.63
PEX6	YNL329C	SEN54	Q02825	467 aa	Predicted RBP	4.9	□□□□□ -1.63
PEX6	YNL329C	PNP1	Q05788	311 aa		4.89	□□□□□ -1.63
PEX6	YNL329C	FUR4	P05316	633 aa	Known RBP	4.88	□□□□□ -1.63
PEX6	YNL329C	SEC20	P28791	383 aa		4.88	□□□□□ -1.63
PEX6	YNL329C	ISR1	Q06098	443 aa	Known RBP	4.88	□□□□□ -1.63
PEX6	YNL329C	KIP2	P28743	706 aa		4.88	□□□□□ -1.63
PEX6	YNL329C	BNI4	P53858	892 aa		4.88	□□□□□ -1.63
PEX6	YNL329C	VAN1	P23642	535 aa		4.88	□□□□□ -1.63
PEX6	YNL329C	SPT23	P35210	1082 aa		4.88	□□□□□ -1.63
PEX6	YNL329C	TPS3	P38426	1054 aa	Known RBP	4.88	□□□□□ -1.63
PEX6	YNL329C	HXT10	P43581	546 aa		4.88	□□□□□ -1.63
PEX6	YNL329C	GLO3	P38682	493 aa	Known RBP	4.87	□□□□□ -1.63
PEX6	YNL329C	YHL050C	P38721	697 aa		4.87	□□□□□ -1.63
PEX6	YNL329C	YHR219W	P38900	624 aa		4.87	□□□□□ -1.63
PEX6	YNL329C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
PEX6	YNL329C	GYP1	Q08484	637 aa		4.87	□□□□□ -1.63
PEX6	YNL329C	TSC13	Q99190	310 aa		4.87	□□□□□ -1.63
PEX6	YNL329C	ROM1	P53046	1155 aa		4.86	□□□□□ -1.63
PEX6	YNL329C	PUF6	Q04373	656 aa	Known RBP	4.86	□□□□□ -1.63
PEX6	YNL329C	POL32	P47110	350 aa		4.85	□□□□□ -1.63
PEX6	YNL329C	GAS4	Q08271	471 aa		4.85	□□□□□ -1.63
PEX6	YNL329C	ASF1	P32447	279 aa		4.85	□□□□□ -1.63
PEX6	YNL329C	YPR084W	Q06821	456 aa		4.85	□□□□□ -1.63
PEX6	YNL329C	IXR1	P33417	597 aa		4.84	□□□□□ -1.63
PEX6	YNL329C	ATG20	Q07528	640 aa		4.84	□□□□□ -1.63
PEX6	YNL329C	YPR015C	Q12531	247 aa		4.84	□□□□□ -1.63
PEX6	YNL329C	AIM9	P40053	627 aa	Known RBP	4.84	□□□□□ -1.63
PEX6	YNL329C	YFL034W	P43564	1073 aa		4.84	□□□□□ -1.63
PEX6	YNL329C	APP1	P53933	587 aa		4.84	□□□□□ -1.63
PEX6	YNL329C	MSC6	Q08818	692 aa	Known RBP	4.84	□□□□□ -1.63
PEX6	YNL329C	TRS33	Q99394	268 aa		4.84	□□□□□ -1.63
PEX6	YNL329C	CWC15	Q03772	175 aa	Known RBP	4.83	□□□□□ -1.64
PEX6	YNL329C	CWH41	P53008	833 aa		4.83	□□□□□ -1.64
PEX6	YNL329C	HDA3	Q06623	655 aa		4.83	□□□□□ -1.64
PEX6	YNL329C	SRS2	P12954	1174 aa		4.83	□□□□□ -1.64
PEX6	YNL329C	DAT1	P13483	248 aa	Known RBP	4.83	□□□□□ -1.64
PEX6	YNL329C	VAC17	P25591	423 aa		4.83	□□□□□ -1.64
PEX6	YNL329C	NTH2	P35172	780 aa		4.83	□□□□□ -1.64
PEX6	YNL329C	UTP13	Q05946	817 aa	Known RBP	4.83	□□□□□ -1.64
PEX6	YNL329C	HAL5	P38970	855 aa	Known RBP	4.82	□□□□□ -1.64
PEX6	YNL329C	BOL3	P39724	118 aa		4.82	□□□□□ -1.64
PEX6	YNL329C	YJL171C	P46992	396 aa		4.82	□□□□□ -1.64
PEX6	YNL329C	RRD1	P40454	393 aa	Known RBP	4.82	□□□□□ -1.64
PEX6	YNL329C	QDR1	P40475	563 aa		4.82	□□□□□ -1.64
PEX6	YNL329C	PUS5	Q06244	254 aa		4.82	□□□□□ -1.64
PEX6	YNL329C	FKH1	P40466	484 aa		4.81	□□□□□ -1.64
PEX6	YNL329C	MDJ2	P42834	146 aa		4.81	□□□□□ -1.64
PEX6	YNL329C	ALD2	P47771	506 aa		4.81	□□□□□ -1.64
PEX6	YNL329C	FOX2	Q02207	900 aa	Known RBP	4.81	□□□□□ -1.64
PEX6	YNL329C	ALD4	P46367	519 aa	Known RBP	4.81	□□□□□ -1.64
PEX6	YNL329C	OYE2	Q03558	400 aa	Known RBP	4.8	□□□□□ -1.64
PEX6	YNL329C	PAM1	P37304	830 aa	Known RBP	4.8	□□□□□ -1.64
PEX6	YNL329C	MGE1	P38523	228 aa		4.79	□□□□□ -1.64
PEX6	YNL329C	ATG1	P53104	897 aa		4.79	□□□□□ -1.64
PEX6	YNL329C	FRK1	Q03002	865 aa	Predicted RBP	4.79	□□□□□ -1.64
PEX6	YNL329C	JIP5	Q06214	492 aa	Predicted RBP	4.79	□□□□□ -1.64
PEX6	YNL329C	CYT1	P07143	309 aa		4.79	□□□□□ -1.64
PEX6	YNL329C	TRL1	P09880	827 aa	Known RBP	4.79	□□□□□ -1.64
PEX6	YNL329C	TBS1	P38114	1094 aa		4.79	□□□□□ -1.64
PEX6	YNL329C	APL6	P46682	809 aa		4.78	□□□□□ -1.64
PEX6	YNL329C	BMT6	Q12291	365 aa		4.78	□□□□□ -1.64
PEX6	YNL329C	RPS6A	P0CX37	236 aa	Known RBP	4.78	□□□□□ -1.64
PEX6	YNL329C	RPS6B	P0CX38	236 aa	Predicted RBP	4.78	□□□□□ -1.64
PEX6	YNL329C	UTR2	P32623	467 aa		4.78	□□□□□ -1.64
PEX6	YNL329C	ATE1	P16639	503 aa		4.78	□□□□□ -1.64
PEX6	YNL329C	MKS1	P34072	584 aa		4.77	□□□□□ -1.65
PEX6	YNL329C	PRE3	P38624	215 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms