RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C RPA14P50106 137 aa5.15□□□□□ -1.59
SSN8YNL025C ATF2P53296 535 aa5.15□□□□□ -1.59
SSN8YNL025C UBP2Q01476 1272 aa5.15□□□□□ -1.59
SSN8YNL025C YPR097WQ06839 1073 aa5.15□□□□□ -1.59
SSN8YNL025C ALR1Q08269 859 aa5.14□□□□□ -1.59
SSN8YNL025C MRT4P33201 236 aaKnown RBP5.13□□□□□ -1.59
SSN8YNL025C GLN1P32288 370 aaKnown RBP5.12□□□□□ -1.59
SSN8YNL025C LSC2P53312 427 aa5.12□□□□□ -1.59
SSN8YNL025C MMP1Q12372 583 aa5.12□□□□□ -1.59
SSN8YNL025C IXR1P33417 597 aa5.11□□□□□ -1.59
SSN8YNL025C TBF1Q02457 562 aa5.11□□□□□ -1.59
SSN8YNL025C AIM7Q12156 149 aa5.11□□□□□ -1.59
SSN8YNL025C TRM1P15565 570 aaKnown RBP5.1□□□□□ -1.59
SSN8YNL025C YDL206WQ12424 762 aa5.1□□□□□ -1.59
SSN8YNL025C ARG82P07250 355 aa5.09□□□□□ -1.59
SSN8YNL025C LEO1P38439 464 aa5.09□□□□□ -1.59
SSN8YNL025C SCJ1P25303 377 aa5.08□□□□□ -1.6
SSN8YNL025C MDJ1P35191 511 aa5.08□□□□□ -1.6
SSN8YNL025C ROG3P43602 733 aa5.08□□□□□ -1.6
SSN8YNL025C GLC3P32775 704 aa5.07□□□□□ -1.6
SSN8YNL025C LYS5P50113 272 aa5.07□□□□□ -1.6
SSN8YNL025C TY1A-MR1Q04215 440 aa5.07□□□□□ -1.6
SSN8YNL025C RSC30P38781 883 aa5.05□□□□□ -1.6
SSN8YNL025C AAD14P42884 376 aa5.05□□□□□ -1.6
SSN8YNL025C NSG2P53898 299 aa5.05□□□□□ -1.6
SSN8YNL025C ESS1P22696 170 aa5.04□□□□□ -1.6
SSN8YNL025C OSH7P38755 437 aa5.04□□□□□ -1.6
SSN8YNL025C YJR098CP47139 656 aa5.04□□□□□ -1.6
SSN8YNL025C VAC17P25591 423 aa5.03□□□□□ -1.6
SSN8YNL025C JJJ3P47138 172 aa5.03□□□□□ -1.6
SSN8YNL025C TCB1Q12466 1186 aa5.03□□□□□ -1.6
SSN8YNL025C YJU3P28321 313 aa5.02□□□□□ -1.61
SSN8YNL025C CCT8P47079 568 aaKnown RBP5.02□□□□□ -1.61
SSN8YNL025C CCP1P00431 361 aa5.01□□□□□ -1.61
SSN8YNL025C KTR1P27810 393 aaKnown RBP5.01□□□□□ -1.61
SSN8YNL025C DLD1P32891 587 aa5.01□□□□□ -1.61
SSN8YNL025C CSN12P47130 423 aa5.01□□□□□ -1.61
SSN8YNL025C THI72Q08579 599 aa5□□□□□ -1.61
SSN8YNL025C SBP1P10080 294 aaKnown RBP4.99□□□□□ -1.61
SSN8YNL025C LEU3P08638 886 aa4.98□□□□□ -1.61
SSN8YNL025C YBL086CP38177 466 aa4.98□□□□□ -1.61
SSN8YNL025C PKH3Q03306 898 aaPredicted RBP4.98□□□□□ -1.61
SSN8YNL025C AI1P03875 834 aa4.97□□□□□ -1.61
SSN8YNL025C SSA2P10592 639 aaKnown RBP4.97□□□□□ -1.61
SSN8YNL025C EMW1P42842 904 aaKnown RBP4.97□□□□□ -1.61
SSN8YNL025C ARG8P18544 423 aa4.96□□□□□ -1.62
SSN8YNL025C YFL066CP43538 392 aa4.95□□□□□ -1.62
SSN8YNL025C FIG4P42837 879 aa4.94□□□□□ -1.62
SSN8YNL025C RAD59Q12223 238 aa4.94□□□□□ -1.62
SSN8YNL025C YPR053CQ6Q5F3 151 aa4.93□□□□□ -1.62
SSN8YNL025C KIN1P13185 1064 aa4.92□□□□□ -1.62
SSN8YNL025C RPN1P38764 993 aaKnown RBP4.91□□□□□ -1.62
SSN8YNL025C MAK16P10962 306 aaPredicted RBP4.9□□□□□ -1.63
SSN8YNL025C TEC1P18412 486 aa4.9□□□□□ -1.63
SSN8YNL025C NAF1P53919 492 aaKnown RBP4.9□□□□□ -1.63
SSN8YNL025C YPR084WQ06821 456 aa4.89□□□□□ -1.63
SSN8YNL025C CSE4P36012 229 aa4.88□□□□□ -1.63
SSN8YNL025C APP1P53933 587 aa4.88□□□□□ -1.63
SSN8YNL025C NAM8Q00539 523 aaKnown RBP4.88□□□□□ -1.63
SSN8YNL025C STE6P12866 1290 aa4.87□□□□□ -1.63
SSN8YNL025C GUT2P32191 649 aa4.87□□□□□ -1.63
SSN8YNL025C MKS1P34072 584 aa4.87□□□□□ -1.63
SSN8YNL025C SKN7P38889 622 aa4.87□□□□□ -1.63
SSN8YNL025C CDC19P00549 500 aaKnown RBP4.86□□□□□ -1.63
SSN8YNL025C FBP26P32604 452 aa4.86□□□□□ -1.63
SSN8YNL025C VTC4P47075 721 aa4.85□□□□□ -1.63
SSN8YNL025C MRX12P47084 519 aa4.85□□□□□ -1.63
SSN8YNL025C CUZ1P53899 274 aa4.85□□□□□ -1.63
SSN8YNL025C HPC2Q01448 625 aa4.85□□□□□ -1.63
SSN8YNL025C FRA1Q07825 749 aa4.85□□□□□ -1.63
SSN8YNL025C BDS1Q08347 646 aa4.85□□□□□ -1.63
SSN8YNL025C RPP2BP02400 110 aaKnown RBP4.84□□□□□ -1.63
SSN8YNL025C CEM1P39525 442 aa4.84□□□□□ -1.63
SSN8YNL025C YMR187CQ03236 431 aa4.84□□□□□ -1.63
SSN8YNL025C ITT1Q04638 464 aa4.84□□□□□ -1.63
SSN8YNL025C DFG5Q05031 458 aa4.84□□□□□ -1.63
SSN8YNL025C SPT5P27692 1063 aaKnown RBP4.83□□□□□ -1.64
SSN8YNL025C GUA1P38625 525 aaKnown RBP4.83□□□□□ -1.64
SSN8YNL025C ISU1Q03020 165 aa4.83□□□□□ -1.64
SSN8YNL025C STE20Q03497 939 aaKnown RBP4.83□□□□□ -1.64
SSN8YNL025C ADE12P80210 433 aaKnown RBP4.82□□□□□ -1.64
SSN8YNL025C ATG20Q07528 640 aa4.82□□□□□ -1.64
SSN8YNL025C TDA6Q06466 467 aa4.81□□□□□ -1.64
SSN8YNL025C DAL1P32375 460 aa4.79□□□□□ -1.64
SSN8YNL025C APL6P46682 809 aa4.79□□□□□ -1.64
SSN8YNL025C BRL1P38770 471 aa4.78□□□□□ -1.64
SSN8YNL025C SBE2P42223 864 aaKnown RBP4.78□□□□□ -1.64
SSN8YNL025C YBL036CP38197 257 aa4.77□□□□□ -1.65
SSN8YNL025C SPT2P06843 333 aaPredicted RBP4.76□□□□□ -1.65
SSN8YNL025C DLD3P39976 496 aaKnown RBP4.76□□□□□ -1.65
SSN8YNL025C UTP13Q05946 817 aaKnown RBP4.76□□□□□ -1.65
SSN8YNL025C MCM16Q12262 181 aa4.76□□□□□ -1.65
SSN8YNL025C YPP1P46951 817 aa4.75□□□□□ -1.65
SSN8YNL025C MSN5P52918 1224 aa4.75□□□□□ -1.65
SSN8YNL025C SYT1Q06836 1226 aa4.75□□□□□ -1.65
SSN8YNL025C DIT1P21623 536 aa4.74□□□□□ -1.65
SSN8YNL025C ATG3P40344 310 aa4.74□□□□□ -1.65
SSN8YNL025C EMP47P43555 445 aa4.74□□□□□ -1.65
SSN8YNL025C YNR014WP53719 212 aa4.74□□□□□ -1.65
SSN8YNL025C YMR265CQ03508 461 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms