RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C GUT2P32191 649 aa7.45□□□□□ -1.22
CUS1YMR240C RRN7P40992 514 aa7.45□□□□□ -1.22
CUS1YMR240C STE20Q03497 939 aaKnown RBP7.45□□□□□ -1.22
CUS1YMR240C FRA1Q07825 749 aa7.45□□□□□ -1.22
CUS1YMR240C CHL1P22516 861 aaPredicted RBP7.44□□□□□ -1.22
CUS1YMR240C TPD3P31383 635 aa7.44□□□□□ -1.22
CUS1YMR240C ISF1P32488 338 aa7.44□□□□□ -1.22
CUS1YMR240C YML083CQ04526 418 aa7.44□□□□□ -1.22
CUS1YMR240C YPR084WQ06821 456 aa7.44□□□□□ -1.22
CUS1YMR240C ATG3P40344 310 aa7.43□□□□□ -1.22
CUS1YMR240C HXT10P43581 546 aa7.43□□□□□ -1.22
CUS1YMR240C YJL171CP46992 396 aa7.43□□□□□ -1.22
CUS1YMR240C ENV9Q08651 330 aa7.43□□□□□ -1.22
CUS1YMR240C CDC3P32457 520 aaKnown RBP7.42□□□□□ -1.22
CUS1YMR240C SPT16P32558 1035 aaKnown RBP7.42□□□□□ -1.22
CUS1YMR240C SAS4Q04003 481 aa7.41□□□□□ -1.22
CUS1YMR240C UTP13Q05946 817 aaKnown RBP7.4□□□□□ -1.22
CUS1YMR240C VAC17P25591 423 aa7.39□□□□□ -1.23
CUS1YMR240C RRD1P40454 393 aaKnown RBP7.39□□□□□ -1.23
CUS1YMR240C APL6P46682 809 aa7.39□□□□□ -1.23
CUS1YMR240C MOD5P07884 428 aa7.38□□□□□ -1.23
CUS1YMR240C SIS1P25294 352 aaKnown RBP7.38□□□□□ -1.23
CUS1YMR240C KTR7P40504 517 aa7.38□□□□□ -1.23
CUS1YMR240C GAL2P13181 574 aa7.37□□□□□ -1.23
CUS1YMR240C ECM23Q02710 187 aa7.37□□□□□ -1.23
CUS1YMR240C GYP1Q08484 637 aa7.36□□□□□ -1.23
CUS1YMR240C SOH1P38633 127 aa7.34□□□□□ -1.23
CUS1YMR240C PHO87P25360 923 aa7.33□□□□□ -1.24
CUS1YMR240C SLD2P34252 453 aa7.33□□□□□ -1.24
CUS1YMR240C HAP4P14064 554 aa7.32□□□□□ -1.24
CUS1YMR240C MRF1P30775 413 aaPredicted RBP7.32□□□□□ -1.24
CUS1YMR240C UBX7P38349 436 aa7.32□□□□□ -1.24
CUS1YMR240C SSF1P38789 453 aaPredicted RBP7.31□□□□□ -1.24
CUS1YMR240C IXR1P33417 597 aa7.29□□□□□ -1.24
CUS1YMR240C PUF6Q04373 656 aaKnown RBP7.29□□□□□ -1.24
CUS1YMR240C YEL077CQ3E7X8 1277 aa7.29□□□□□ -1.24
CUS1YMR240C TSC13Q99190 310 aa7.29□□□□□ -1.24
CUS1YMR240C ACS2P52910 683 aaKnown RBP7.28□□□□□ -1.24
CUS1YMR240C HAT1Q12341 374 aa7.28□□□□□ -1.24
CUS1YMR240C CWC15Q03772 175 aaKnown RBP7.27□□□□□ -1.24
CUS1YMR240C GAS4Q08271 471 aa7.27□□□□□ -1.24
CUS1YMR240C YFL034WP43564 1073 aa7.27□□□□□ -1.25
CUS1YMR240C ISR1Q06098 443 aaKnown RBP7.27□□□□□ -1.25
CUS1YMR240C KIP2P28743 706 aa7.26□□□□□ -1.25
CUS1YMR240C HAL5P38970 855 aaKnown RBP7.26□□□□□ -1.25
CUS1YMR240C ROM1P53046 1155 aa7.26□□□□□ -1.25
CUS1YMR240C ATG20Q07528 640 aa7.26□□□□□ -1.25
CUS1YMR240C SDH2P21801 266 aa7.25□□□□□ -1.25
CUS1YMR240C VRP1P37370 817 aa7.25□□□□□ -1.25
CUS1YMR240C EMW1P42842 904 aaKnown RBP7.25□□□□□ -1.25
CUS1YMR240C SYH1Q02875 849 aaKnown RBP7.25□□□□□ -1.25
CUS1YMR240C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.25□□□□□ -1.25not detected
CUS1YMR240C PDI1P17967 522 aaKnown RBP7.24□□□□□ -1.25
CUS1YMR240C BDP1P46678 594 aa7.24□□□□□ -1.25
CUS1YMR240C ITT1Q04638 464 aa7.24□□□□□ -1.25
CUS1YMR240C SEN54Q02825 467 aaPredicted RBP7.23□□□□□ -1.25
CUS1YMR240C HDA3Q06623 655 aa7.23□□□□□ -1.25
CUS1YMR240C MIP1P15801 1254 aa7.22□□□□□ -1.25
CUS1YMR240C TPS3P38426 1054 aaKnown RBP7.22□□□□□ -1.25
CUS1YMR240C AIM9P40053 627 aaKnown RBP7.22□□□□□ -1.25
CUS1YMR240C PUS5Q06244 254 aa7.22□□□□□ -1.25
CUS1YMR240C SRS2P12954 1174 aa7.21□□□□□ -1.26
CUS1YMR240C VAN1P23642 535 aa7.21□□□□□ -1.26
CUS1YMR240C STM1P39015 273 aaKnown RBP7.2□□□□□ -1.26
CUS1YMR240C KAR5Q04746 504 aa7.2□□□□□ -1.26
CUS1YMR240C YBL113CQ7M4S9 792 aa7.2□□□□□ -1.26
CUS1YMR240C SPT2P06843 333 aaPredicted RBP7.19□□□□□ -1.26
CUS1YMR240C HEM3P28789 327 aa7.19□□□□□ -1.26
CUS1YMR240C CST6P40535 587 aa7.19□□□□□ -1.26
CUS1YMR240C APP1P53933 587 aa7.19□□□□□ -1.26
CUS1YMR240C FRK1Q03002 865 aaPredicted RBP7.19□□□□□ -1.26
CUS1YMR240C PNP1Q05788 311 aa7.19□□□□□ -1.26
CUS1YMR240C PUN1Q06991 263 aa7.19□□□□□ -1.26
CUS1YMR240C UBP1P25037 809 aa7.18□□□□□ -1.26
CUS1YMR240C NTH2P35172 780 aa7.18□□□□□ -1.26
CUS1YMR240C ERP5P38819 212 aa7.18□□□□□ -1.26
CUS1YMR240C ISU1Q03020 165 aa7.18□□□□□ -1.26
CUS1YMR240C TRS33Q99394 268 aa7.18□□□□□ -1.26
CUS1YMR240C FBP26P32604 452 aa7.17□□□□□ -1.26
CUS1YMR240C MRT4P33201 236 aaKnown RBP7.17□□□□□ -1.26
CUS1YMR240C TRL1P09880 827 aaKnown RBP7.16□□□□□ -1.26
CUS1YMR240C UTR2P32623 467 aa7.16□□□□□ -1.26
CUS1YMR240C BCK2P33306 851 aa7.16□□□□□ -1.26
CUS1YMR240C MKS1P34072 584 aa7.16□□□□□ -1.26
CUS1YMR240C CYT1P07143 309 aa7.15□□□□□ -1.26
CUS1YMR240C RPS6AP0CX37 236 aaKnown RBP7.15□□□□□ -1.26
CUS1YMR240C RPS6BP0CX38 236 aaPredicted RBP7.15□□□□□ -1.26
CUS1YMR240C SEC20P28791 383 aa7.15□□□□□ -1.26
CUS1YMR240C BOL3P39724 118 aa7.15□□□□□ -1.26
CUS1YMR240C ATG1P53104 897 aa7.14□□□□□ -1.27
CUS1YMR240C RPP2BP02400 110 aaKnown RBP7.13□□□□□ -1.27
CUS1YMR240C FUR4P05316 633 aaKnown RBP7.13□□□□□ -1.27
CUS1YMR240C SWI5P08153 709 aa7.13□□□□□ -1.27
CUS1YMR240C STE6P12866 1290 aa7.13□□□□□ -1.27
CUS1YMR240C YBL086CP38177 466 aa7.13□□□□□ -1.27
CUS1YMR240C ALD4P46367 519 aaKnown RBP7.13□□□□□ -1.27
CUS1YMR240C CWH41P53008 833 aa7.13□□□□□ -1.27
CUS1YMR240C HED1Q03937 162 aa7.13□□□□□ -1.27
CUS1YMR240C SUV3P32580 737 aa7.12□□□□□ -1.27
CUS1YMR240C NGR1P32831 672 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms