RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W YDR444WQ04093 687 aa8.3□□□□□ -1.08
CSM3YMR048W MAK16P10962 306 aaPredicted RBP8.29□□□□□ -1.08
CSM3YMR048W GBP2P25555 427 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
CSM3YMR048W LCB5Q06147 687 aaKnown RBP8.28□□□□□ -1.08
CSM3YMR048W SRF1Q12516 437 aa8.28□□□□□ -1.08
CSM3YMR048W TEC1P18412 486 aa8.27□□□□□ -1.09
CSM3YMR048W CSE4P36012 229 aa8.27□□□□□ -1.09
CSM3YMR048W PTK2P47116 818 aaKnown RBP8.27□□□□□ -1.09
CSM3YMR048W EMW1P42842 904 aaKnown RBP8.26□□□□□ -1.09
CSM3YMR048W NAF1P53919 492 aaKnown RBP8.26□□□□□ -1.09
CSM3YMR048W YBL086CP38177 466 aa8.25□□□□□ -1.09
CSM3YMR048W YPL062WQ02781 134 aa8.25□□□□□ -1.09
CSM3YMR048W BRL1P38770 471 aa8.23□□□□□ -1.09
CSM3YMR048W YLR346CQ06139 101 aa8.23□□□□□ -1.09
CSM3YMR048W NUP85P46673 744 aa8.22□□□□□ -1.09
CSM3YMR048W APP1P53933 587 aa8.22□□□□□ -1.09
CSM3YMR048W YPR084WQ06821 456 aa8.22□□□□□ -1.09
CSM3YMR048W GUT2P32191 649 aa8.21□□□□□ -1.1
CSM3YMR048W ARG82P07250 355 aa8.2□□□□□ -1.1
CSM3YMR048W SPT5P27692 1063 aaKnown RBP8.2□□□□□ -1.1
CSM3YMR048W ITT1Q04638 464 aa8.2□□□□□ -1.1
CSM3YMR048W YBL036CP38197 257 aa8.18□□□□□ -1.1
CSM3YMR048W TFB3Q03290 321 aa8.18□□□□□ -1.1
CSM3YMR048W MKS1P34072 584 aa8.17□□□□□ -1.1
CSM3YMR048W AAD14P42884 376 aa8.17□□□□□ -1.1
CSM3YMR048W OPT2Q06593 877 aa8.17□□□□□ -1.1
CSM3YMR048W FRA1Q07825 749 aa8.16□□□□□ -1.1
CSM3YMR048W STE20Q03497 939 aaKnown RBP8.15□□□□□ -1.1
CSM3YMR048W GLY1P37303 387 aaKnown RBP8.14□□□□□ -1.11
CSM3YMR048W MRX12P47084 519 aa8.14□□□□□ -1.11
CSM3YMR048W LSC2P53312 427 aa8.14□□□□□ -1.11
CSM3YMR048W FBP26P32604 452 aa8.13□□□□□ -1.11
CSM3YMR048W MIP1P15801 1254 aa8.12□□□□□ -1.11
CSM3YMR048W DFG5Q05031 458 aa8.12□□□□□ -1.11
CSM3YMR048W YDL176WQ12027 708 aa8.12□□□□□ -1.11
CSM3YMR048W ACO2P39533 789 aa8.11□□□□□ -1.11
CSM3YMR048W BDS1Q08347 646 aa8.11□□□□□ -1.11
CSM3YMR048W PKC1P24583 1151 aa8.1□□□□□ -1.11
CSM3YMR048W UBP2Q01476 1272 aa8.1□□□□□ -1.11
CSM3YMR048W ATG20Q07528 640 aa8.1□□□□□ -1.11
CSM3YMR048W STE6P12866 1290 aa8.09□□□□□ -1.11
CSM3YMR048W SCW11P53189 542 aa8.09□□□□□ -1.11
CSM3YMR048W LEO1P38439 464 aa8.08□□□□□ -1.12
CSM3YMR048W YJR098CP47139 656 aa8.08□□□□□ -1.12
CSM3YMR048W HGH1P48362 394 aaKnown RBP8.08□□□□□ -1.12
CSM3YMR048W RGA2Q06407 1009 aa8.08□□□□□ -1.12
CSM3YMR048W MCM16Q12262 181 aa8.08□□□□□ -1.12
CSM3YMR048W RPP2BP02400 110 aaKnown RBP8.07□□□□□ -1.12
CSM3YMR048W EMP47P43555 445 aa8.07□□□□□ -1.12
CSM3YMR048W ISU1Q03020 165 aa8.07□□□□□ -1.12
CSM3YMR048W TY1A-BLQ12266 440 aa8.07□□□□□ -1.12
CSM3YMR048W YDJ1P25491 409 aaKnown RBP8.06□□□□□ -1.12
CSM3YMR048W YPP1P46951 817 aa8.06□□□□□ -1.12
CSM3YMR048W DLD1P32891 587 aa8.05□□□□□ -1.12
CSM3YMR048W APL6P46682 809 aa8.05□□□□□ -1.12
CSM3YMR048W CAF120P53836 1060 aa8.05□□□□□ -1.12
CSM3YMR048W BIO2P32451 375 aa8.03□□□□□ -1.12
CSM3YMR048W TCB1Q12466 1186 aa8.03□□□□□ -1.12
CSM3YMR048W SUP45P12385 437 aaKnown RBP8.02□□□□□ -1.13
CSM3YMR048W ISF1P32488 338 aa8.02□□□□□ -1.13
CSM3YMR048W ATG3P40344 310 aa8.02□□□□□ -1.13
CSM3YMR048W UTP13Q05946 817 aaKnown RBP8□□□□□ -1.13
CSM3YMR048W DLD3P39976 496 aaKnown RBP7.99□□□□□ -1.13
CSM3YMR048W YIR007WP40566 764 aa7.99□□□□□ -1.13
CSM3YMR048W YNL108CP53929 270 aa7.99□□□□□ -1.13
CSM3YMR048W ISR1Q06098 443 aaKnown RBP7.99□□□□□ -1.13
CSM3YMR048W OSH7P38755 437 aa7.98□□□□□ -1.13
CSM3YMR048W VTC4P47075 721 aa7.98□□□□□ -1.13
CSM3YMR048W YJL007CP47080 104 aa7.98□□□□□ -1.13
CSM3YMR048W SPT2P06843 333 aaPredicted RBP7.97□□□□□ -1.13
CSM3YMR048W ENO2P00925 437 aaKnown RBP7.96□□□□□ -1.14
CSM3YMR048W UTR2P32623 467 aa7.94□□□□□ -1.14
CSM3YMR048W DAL1P32375 460 aa7.93□□□□□ -1.14
CSM3YMR048W RIM21P48565 533 aa7.93□□□□□ -1.14
CSM3YMR048W WTM2Q12206 467 aa7.93□□□□□ -1.14
CSM3YMR048W DAT1P13483 248 aaKnown RBP7.92□□□□□ -1.14
CSM3YMR048W TBS1P38114 1094 aa7.92□□□□□ -1.14
CSM3YMR048W SOH1P38633 127 aa7.92□□□□□ -1.14
CSM3YMR048W ROG3P43602 733 aa7.92□□□□□ -1.14
CSM3YMR048W TY1A-MR1Q04215 440 aa7.92□□□□□ -1.14
CSM3YMR048W HAL5P38970 855 aaKnown RBP7.91□□□□□ -1.14
CSM3YMR048W BIM1P40013 344 aa7.91□□□□□ -1.14
CSM3YMR048W YGR035CP53222 116 aa7.91□□□□□ -1.14
CSM3YMR048W CDC19P00549 500 aaKnown RBP7.89□□□□□ -1.15
CSM3YMR048W MSN5P52918 1224 aa7.89□□□□□ -1.15
CSM3YMR048W HPF1Q05164 967 aa7.88□□□□□ -1.15
CSM3YMR048W TIF1P10081 395 aaKnown RBP7.87□□□□□ -1.15
CSM3YMR048W ATG32P40458 529 aa7.87□□□□□ -1.15
CSM3YMR048W RPL34BP40525 121 aaKnown RBP7.87□□□□□ -1.15
CSM3YMR048W HDA3Q06623 655 aa7.87□□□□□ -1.15
CSM3YMR048W TRK2P28584 889 aa7.86□□□□□ -1.15
CSM3YMR048W SSN3P39073 555 aa7.86□□□□□ -1.15
CSM3YMR048W SLX8P40072 274 aa7.86□□□□□ -1.15
CSM3YMR048W MRX10Q05648 414 aa7.86□□□□□ -1.15
CSM3YMR048W CCP1P00431 361 aa7.85□□□□□ -1.15
CSM3YMR048W RDS2P19541 446 aaKnown RBP7.85□□□□□ -1.15
CSM3YMR048W RTG2P32608 588 aaKnown RBP7.84□□□□□ -1.15
CSM3YMR048W SUM1P46676 1062 aa7.84□□□□□ -1.15
CSM3YMR048W NAM8Q00539 523 aaKnown RBP7.84□□□□□ -1.15
CSM3YMR048W UBP15P50101 1230 aa7.83□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 118.3 ms