RNA–Protein interactions for RNA: YML097C

VPS9, Transcript of Guanine nucleotide exchange factor (GEF), yeastyeast

Gene VPS9, Length 1,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS9YML097C RPL34AP87262 121 aaPredicted RBP5.29□□□□□ -1.56
VPS9YML097C RAD59Q12223 238 aa5.29□□□□□ -1.56
VPS9YML097C ARG8P18544 423 aa5.27□□□□□ -1.57
VPS9YML097C TUB4P53378 473 aa5.27□□□□□ -1.57
VPS9YML097C HST2P53686 357 aa5.27□□□□□ -1.57
VPS9YML097C NOP8Q08287 484 aaPredicted RBP5.27□□□□□ -1.57
VPS9YML097C MOD5P07884 428 aa5.26□□□□□ -1.57
VPS9YML097C YJU3P28321 313 aa5.26□□□□□ -1.57
VPS9YML097C TTI1P36097 1038 aa5.26□□□□□ -1.57
VPS9YML097C SRF1Q12516 437 aa5.25□□□□□ -1.57
VPS9YML097C UGA3P26370 528 aa5.23□□□□□ -1.57
VPS9YML097C TRK2P28584 889 aa5.23□□□□□ -1.57
VPS9YML097C YGR035CP53222 116 aa5.23□□□□□ -1.57
VPS9YML097C CSE4P36012 229 aa5.22□□□□□ -1.57
VPS9YML097C OPT2Q06593 877 aa5.22□□□□□ -1.57
VPS9YML097C NOB1Q08444 459 aaKnown RBP5.22□□□□□ -1.57
VPS9YML097C ENO2P00925 437 aaKnown RBP5.21□□□□□ -1.58
VPS9YML097C YDJ1P25491 409 aaKnown RBP5.21□□□□□ -1.58
VPS9YML097C AGE1Q04412 482 aa5.21□□□□□ -1.58
VPS9YML097C YML083CQ04526 418 aa5.21□□□□□ -1.58
VPS9YML097C ENO1P00924 437 aaKnown RBP5.2□□□□□ -1.58
VPS9YML097C SLY41P22215 453 aa5.2□□□□□ -1.58
VPS9YML097C SLD2P34252 453 aa5.2□□□□□ -1.58
VPS9YML097C CDC3P32457 520 aaKnown RBP5.19□□□□□ -1.58
VPS9YML097C SUP45P12385 437 aaKnown RBP5.18□□□□□ -1.58
VPS9YML097C YLR346CQ06139 101 aa5.18□□□□□ -1.58
VPS9YML097C ACO2P39533 789 aa5.17□□□□□ -1.58
VPS9YML097C PTK2P47116 818 aaKnown RBP5.17□□□□□ -1.58
VPS9YML097C MSB3P48566 633 aaPredicted RBP5.17□□□□□ -1.58
VPS9YML097C SYH1Q02875 849 aaKnown RBP5.17□□□□□ -1.58
VPS9YML097C SIT4P20604 311 aa5.16□□□□□ -1.58
VPS9YML097C PUP1P25043 261 aa5.16□□□□□ -1.58
VPS9YML097C YIR007WP40566 764 aa5.16□□□□□ -1.58
VPS9YML097C KXD1P53158 218 aa5.16□□□□□ -1.58
VPS9YML097C HPF1Q05164 967 aa5.16□□□□□ -1.58
VPS9YML097C KTR7P40504 517 aa5.16□□□□□ -1.58
VPS9YML097C HAT1Q12341 374 aa5.16□□□□□ -1.58
VPS9YML097C MAK16P10962 306 aaPredicted RBP5.15□□□□□ -1.59
VPS9YML097C SPT5P27692 1063 aaKnown RBP5.15□□□□□ -1.59
VPS9YML097C KIP2P28743 706 aa5.15□□□□□ -1.59
VPS9YML097C TRM1P15565 570 aaKnown RBP5.14□□□□□ -1.59
VPS9YML097C TGL4P36165 910 aa5.14□□□□□ -1.59
VPS9YML097C MRX12P47084 519 aa5.14□□□□□ -1.59
VPS9YML097C NOP7P53261 605 aaKnown RBP5.14□□□□□ -1.59
VPS9YML097C MRX10Q05648 414 aa5.14□□□□□ -1.59
VPS9YML097C SIS2P36024 562 aa5.13□□□□□ -1.59
VPS9YML097C RSC30P38781 883 aa5.13□□□□□ -1.59
VPS9YML097C SSF1P38789 453 aaPredicted RBP5.13□□□□□ -1.59
VPS9YML097C RIM21P48565 533 aa5.13□□□□□ -1.59
VPS9YML097C YNL115CP53925 644 aa5.13□□□□□ -1.59
VPS9YML097C AIM44Q99299 758 aa5.13□□□□□ -1.59
VPS9YML097C HXT10P43581 546 aa5.12□□□□□ -1.59
VPS9YML097C SCW11P53189 542 aa5.12□□□□□ -1.59
VPS9YML097C ECM23Q02710 187 aa5.12□□□□□ -1.59
VPS9YML097C ISF1P32488 338 aa5.11□□□□□ -1.59
VPS9YML097C TBF1Q02457 562 aa5.11□□□□□ -1.59
VPS9YML097C MIP1P15801 1254 aa5.1□□□□□ -1.59
VPS9YML097C YPP1P46951 817 aa5.09□□□□□ -1.59
VPS9YML097C SNU71P53207 620 aaKnown RBP5.09□□□□□ -1.59
VPS9YML097C PUS6P53294 404 aa5.09□□□□□ -1.59
VPS9YML097C MCM16Q12262 181 aa5.09□□□□□ -1.59
VPS9YML097C PDC1P06169 563 aaKnown RBP5.08□□□□□ -1.6
VPS9YML097C IXR1P33417 597 aa5.08□□□□□ -1.6
VPS9YML097C UBX7P38349 436 aa5.08□□□□□ -1.6
VPS9YML097C LSB3P43603 459 aaKnown RBP5.08□□□□□ -1.6
VPS9YML097C RTF1P53064 558 aa5.08□□□□□ -1.6
VPS9YML097C SEN54Q02825 467 aaPredicted RBP5.07□□□□□ -1.6
VPS9YML097C RDS2P19541 446 aaKnown RBP5.06□□□□□ -1.6
VPS9YML097C RRN6P32786 894 aa5.06□□□□□ -1.6
VPS9YML097C GLY1P37303 387 aaKnown RBP5.06□□□□□ -1.6
VPS9YML097C EMP47P43555 445 aa5.06□□□□□ -1.6
VPS9YML097C NUP85P46673 744 aa5.06□□□□□ -1.6
VPS9YML097C PUS1Q12211 544 aaKnown RBP5.06□□□□□ -1.6
VPS9YML097C TY1A-BLQ12266 440 aa5.06□□□□□ -1.6
VPS9YML097C HEM3P28789 327 aa5.05□□□□□ -1.6
VPS9YML097C PEP12P32854 288 aa5.05□□□□□ -1.6
VPS9YML097C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
VPS9YML097C NAF1P53919 492 aaKnown RBP5.05□□□□□ -1.6
VPS9YML097C YDL206WQ12424 762 aa5.05□□□□□ -1.6
VPS9YML097C MET10P39692 1035 aa5.04□□□□□ -1.6
VPS9YML097C ICP55P40051 511 aa5.04□□□□□ -1.6
VPS9YML097C YBL113CQ7M4S9 792 aa5.04□□□□□ -1.6
VPS9YML097C IPL1P38991 367 aa5.04□□□□□ -1.6
VPS9YML097C KAR5Q04746 504 aa5.04□□□□□ -1.6
VPS9YML097C GAL2P13181 574 aa5.03□□□□□ -1.6
VPS9YML097C MDJ1P35191 511 aa5.03□□□□□ -1.6
VPS9YML097C TPD3P31383 635 aa5.02□□□□□ -1.61
VPS9YML097C DLD1P32891 587 aa5.02□□□□□ -1.61
VPS9YML097C ORC1P54784 914 aaPredicted RBP5.02□□□□□ -1.61
VPS9YML097C TEC1P18412 486 aa5.01□□□□□ -1.61
VPS9YML097C GRS1P38088 690 aaKnown RBP5.01□□□□□ -1.61
VPS9YML097C ERP5P38819 212 aa5.01□□□□□ -1.61
VPS9YML097C STM1P39015 273 aaKnown RBP5.01□□□□□ -1.61
VPS9YML097C LSC2P53312 427 aa5.01□□□□□ -1.61
VPS9YML097C STE20Q03497 939 aaKnown RBP5.01□□□□□ -1.61
VPS9YML097C ITT1Q04638 464 aa5.01□□□□□ -1.61
VPS9YML097C ALR1Q08269 859 aa5.01□□□□□ -1.61
VPS9YML097C TPS3P38426 1054 aaKnown RBP5□□□□□ -1.61
VPS9YML097C SOH1P38633 127 aa5□□□□□ -1.61
VPS9YML097C PAM1P37304 830 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms