RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C MRX12P47084 519 aa6.94□□□□□ -1.3
VPS71YML041C YPR084WQ06821 456 aa6.94□□□□□ -1.3
VPS71YML041C YPR097WQ06839 1073 aa6.94□□□□□ -1.3
VPS71YML041C SSF1P38789 453 aaPredicted RBP6.93□□□□□ -1.3
VPS71YML041C RPA14P50106 137 aa6.93□□□□□ -1.3
VPS71YML041C RPL34AP87262 121 aaPredicted RBP6.93□□□□□ -1.3
VPS71YML041C SEN54Q02825 467 aaPredicted RBP6.92□□□□□ -1.3
VPS71YML041C YDL206WQ12424 762 aa6.92□□□□□ -1.3
VPS71YML041C FIG4P42837 879 aa6.91□□□□□ -1.3
VPS71YML041C APL6P46682 809 aa6.91□□□□□ -1.3
VPS71YML041C FRA1Q07825 749 aa6.91□□□□□ -1.3
VPS71YML041C AMS1P22855 1083 aa6.9□□□□□ -1.3
VPS71YML041C TBF1Q02457 562 aa6.9□□□□□ -1.3
VPS71YML041C GAL2P13181 574 aa6.89□□□□□ -1.31
VPS71YML041C ISF1P32488 338 aa6.89□□□□□ -1.31
VPS71YML041C EMP47P43555 445 aa6.89□□□□□ -1.31
VPS71YML041C MRF1P30775 413 aaPredicted RBP6.88□□□□□ -1.31
VPS71YML041C SRC1Q03707 834 aa6.88□□□□□ -1.31
VPS71YML041C PDC1P06169 563 aaKnown RBP6.87□□□□□ -1.31
VPS71YML041C SLD2P34252 453 aa6.87□□□□□ -1.31
VPS71YML041C PAC1P39946 494 aaKnown RBP6.87□□□□□ -1.31
VPS71YML041C ECM23Q02710 187 aa6.87□□□□□ -1.31
VPS71YML041C UTP13Q05946 817 aaKnown RBP6.87□□□□□ -1.31
VPS71YML041C TEC1P18412 486 aa6.86□□□□□ -1.31
VPS71YML041C TPD3P31383 635 aa6.86□□□□□ -1.31
VPS71YML041C GUT2P32191 649 aa6.86□□□□□ -1.31
VPS71YML041C RRN7P40992 514 aa6.86□□□□□ -1.31
VPS71YML041C HAT1Q12341 374 aa6.86□□□□□ -1.31
VPS71YML041C SPT16P32558 1035 aaKnown RBP6.85□□□□□ -1.31
VPS71YML041C STE20Q03497 939 aaKnown RBP6.85□□□□□ -1.31
VPS71YML041C CWC15Q03772 175 aaKnown RBP6.85□□□□□ -1.31
VPS71YML041C HEM3P28789 327 aa6.84□□□□□ -1.31
VPS71YML041C ALR1Q08269 859 aa6.84□□□□□ -1.31
VPS71YML041C YEL077CQ3E7X8 1277 aa6.84□□□□□ -1.31
VPS71YML041C MOD5P07884 428 aa6.83□□□□□ -1.32
VPS71YML041C KTR7P40504 517 aa6.83□□□□□ -1.32
VPS71YML041C ENV9Q08651 330 aa6.83□□□□□ -1.32
VPS71YML041C PHO87P25360 923 aa6.82□□□□□ -1.32
VPS71YML041C TPS3P38426 1054 aaKnown RBP6.82□□□□□ -1.32
VPS71YML041C TRL1P09880 827 aaKnown RBP6.81□□□□□ -1.32
VPS71YML041C VAC17P25591 423 aa6.81□□□□□ -1.32
VPS71YML041C CST6P40535 587 aa6.81□□□□□ -1.32
VPS71YML041C HXT10P43581 546 aa6.81□□□□□ -1.32
VPS71YML041C PAT1P25644 796 aaKnown RBP6.8□□□□□ -1.32
VPS71YML041C UBX7P38349 436 aa6.8□□□□□ -1.32
VPS71YML041C ATG3P40344 310 aa6.8□□□□□ -1.32
VPS71YML041C ACS2P52910 683 aaKnown RBP6.8□□□□□ -1.32
VPS71YML041C ROM1P53046 1155 aa6.8□□□□□ -1.32
VPS71YML041C KXD1P53158 218 aa6.8□□□□□ -1.32
VPS71YML041C PUF6Q04373 656 aaKnown RBP6.8□□□□□ -1.32
VPS71YML041C HAP4P14064 554 aa6.78□□□□□ -1.32
VPS71YML041C SOH1P38633 127 aa6.78□□□□□ -1.32
VPS71YML041C ERP5P38819 212 aa6.78□□□□□ -1.32
VPS71YML041C STM1P39015 273 aaKnown RBP6.77□□□□□ -1.33
VPS71YML041C YBL113CQ7M4S9 792 aa6.77□□□□□ -1.33
VPS71YML041C TSC13Q99190 310 aa6.77□□□□□ -1.33
VPS71YML041C RRD1P40454 393 aaKnown RBP6.76□□□□□ -1.33
VPS71YML041C MDJ2P42834 146 aa6.76□□□□□ -1.33
VPS71YML041C IXR1P33417 597 aa6.75□□□□□ -1.33
VPS71YML041C HAL5P38970 855 aaKnown RBP6.75□□□□□ -1.33
VPS71YML041C BDP1P46678 594 aa6.75□□□□□ -1.33
VPS71YML041C FRK1Q03002 865 aaPredicted RBP6.75□□□□□ -1.33
VPS71YML041C PAM1P37304 830 aaKnown RBP6.74□□□□□ -1.33
VPS71YML041C IPL1P38991 367 aa6.74□□□□□ -1.33
VPS71YML041C GAS4Q08271 471 aa6.74□□□□□ -1.33
VPS71YML041C MSC6Q08818 692 aaKnown RBP6.74□□□□□ -1.33
VPS71YML041C AIM44Q99299 758 aa6.74□□□□□ -1.33
VPS71YML041C TRK1P12685 1235 aa6.73□□□□□ -1.33
VPS71YML041C CLA4P48562 842 aa6.73□□□□□ -1.33
VPS71YML041C RRP15Q06511 250 aaPredicted RBP6.73□□□□□ -1.33
VPS71YML041C RRN6P32786 894 aa6.72□□□□□ -1.33
VPS71YML041C RGA1P39083 1007 aa6.72□□□□□ -1.33
VPS71YML041C BOL3P39724 118 aa6.72□□□□□ -1.33
VPS71YML041C SNU71P53207 620 aaKnown RBP6.72□□□□□ -1.33
VPS71YML041C ORC1P54784 914 aaPredicted RBP6.72□□□□□ -1.33
VPS71YML041C PNP1Q05788 311 aa6.72□□□□□ -1.33
VPS71YML041C SRS2P12954 1174 aa6.71□□□□□ -1.34
VPS71YML041C SUV3P32580 737 aa6.71□□□□□ -1.34
VPS71YML041C ATG1P53104 897 aa6.71□□□□□ -1.34
VPS71YML041C KAR5Q04746 504 aa6.71□□□□□ -1.34
VPS71YML041C PDI1P17967 522 aaKnown RBP6.7□□□□□ -1.34
VPS71YML041C SEC20P28791 383 aa6.7□□□□□ -1.34
VPS71YML041C AIR1P40507 360 aaKnown RBP6.7□□□□□ -1.34
VPS71YML041C ITT1Q04638 464 aa6.7□□□□□ -1.34
VPS71YML041C HDA3Q06623 655 aa6.7□□□□□ -1.34
VPS71YML041C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
VPS71YML041C UBP1P25037 809 aa6.69□□□□□ -1.34
VPS71YML041C ISR1Q06098 443 aaKnown RBP6.69□□□□□ -1.34
VPS71YML041C PPX1P38698 397 aa6.68□□□□□ -1.34
VPS71YML041C EMW1P42842 904 aaKnown RBP6.68□□□□□ -1.34
VPS71YML041C LSO1Q3E827 93 aa6.68□□□□□ -1.34
VPS71YML041C VAN1P23642 535 aa6.67□□□□□ -1.34
VPS71YML041C YHL050CP38721 697 aa6.67□□□□□ -1.34
VPS71YML041C YHR219WP38900 624 aa6.67□□□□□ -1.34
VPS71YML041C YFL034WP43564 1073 aa6.67□□□□□ -1.34
VPS71YML041C ACF4P47129 309 aa6.67□□□□□ -1.34
VPS71YML041C PUS5Q06244 254 aa6.67□□□□□ -1.34
VPS71YML041C PUN1Q06991 263 aa6.67□□□□□ -1.34
VPS71YML041C ATG20Q07528 640 aa6.67□□□□□ -1.34
VPS71YML041C SPT2P06843 333 aaPredicted RBP6.66□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms