RNA–Protein interactions for RNA: YLR207W

HRD3, Transcript of ER membrane protein that plays a central role in ERAD, yeastyeast

Gene HRD3, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD3YLR207W KXD1P53158 218 aa3.42□□□□□ -1.86
HRD3YLR207W PHO87P25360 923 aa3.41□□□□□ -1.86
HRD3YLR207W THI12P42883 340 aa3.41□□□□□ -1.86
HRD3YLR207W THI5P43534 340 aa3.41□□□□□ -1.86
HRD3YLR207W THI11P47183 340 aa3.41□□□□□ -1.86
HRD3YLR207W PUF6Q04373 656 aaKnown RBP3.41□□□□□ -1.86
HRD3YLR207W THI13Q07748 340 aa3.41□□□□□ -1.86
HRD3YLR207W PDR1P12383 1068 aa3.41□□□□□ -1.86
HRD3YLR207W RDS2P19541 446 aaKnown RBP3.41□□□□□ -1.86
HRD3YLR207W GRS1P38088 690 aaKnown RBP3.41□□□□□ -1.86
HRD3YLR207W SOH1P38633 127 aa3.41□□□□□ -1.86
HRD3YLR207W TUB4P53378 473 aa3.41□□□□□ -1.86
HRD3YLR207W HAP5Q02516 242 aa3.41□□□□□ -1.86
HRD3YLR207W REV3P14284 1504 aa3.41□□□□□ -1.86
HRD3YLR207W ERP5P38819 212 aa3.4□□□□□ -1.86
HRD3YLR207W IPL1P38991 367 aa3.4□□□□□ -1.86
HRD3YLR207W ISM1P48526 1002 aa3.4□□□□□ -1.86
HRD3YLR207W FUR4P05316 633 aaKnown RBP3.4□□□□□ -1.87
HRD3YLR207W YPR097WQ06839 1073 aa3.4□□□□□ -1.87
HRD3YLR207W PUN1Q06991 263 aa3.4□□□□□ -1.87
HRD3YLR207W YDL129WQ07555 291 aa3.4□□□□□ -1.87
HRD3YLR207W FRA1Q07825 749 aa3.4□□□□□ -1.87
HRD3YLR207W IOC2Q12072 812 aa3.4□□□□□ -1.87
HRD3YLR207W LDB19Q12502 818 aa3.4□□□□□ -1.87
HRD3YLR207W PAM1P37304 830 aaKnown RBP3.39□□□□□ -1.87
HRD3YLR207W YFL034WP43564 1073 aa3.39□□□□□ -1.87
HRD3YLR207W MSC6Q08818 692 aaKnown RBP3.39□□□□□ -1.87
HRD3YLR207W NCR1Q12200 1170 aa3.39□□□□□ -1.87
HRD3YLR207W VAN1P23642 535 aa3.39□□□□□ -1.87
HRD3YLR207W FIG4P42837 879 aa3.39□□□□□ -1.87
HRD3YLR207W UTP13Q05946 817 aaKnown RBP3.39□□□□□ -1.87
HRD3YLR207W MDS3P53094 1487 aa3.39□□□□□ -1.87
HRD3YLR207W YHL050CP38721 697 aa3.38□□□□□ -1.87
HRD3YLR207W YHR219WP38900 624 aa3.38□□□□□ -1.87
HRD3YLR207W STR2P47164 639 aa3.38□□□□□ -1.87
HRD3YLR207W PNP1Q05788 311 aa3.38□□□□□ -1.87
HRD3YLR207W GAS4Q08271 471 aa3.38□□□□□ -1.87
HRD3YLR207W TRS33Q99394 268 aa3.38□□□□□ -1.87
HRD3YLR207W BRN1P38170 754 aa3.38□□□□□ -1.87
HRD3YLR207W POL32P47110 350 aa3.38□□□□□ -1.87
HRD3YLR207W CWH41P53008 833 aa3.38□□□□□ -1.87
HRD3YLR207W ELP4Q02884 456 aaKnown RBP3.38□□□□□ -1.87
HRD3YLR207W TSC13Q99190 310 aa3.38□□□□□ -1.87
HRD3YLR207W SRS2P12954 1174 aa3.37□□□□□ -1.87
HRD3YLR207W PDI1P17967 522 aaKnown RBP3.37□□□□□ -1.87
HRD3YLR207W SPT16P32558 1035 aaKnown RBP3.37□□□□□ -1.87
HRD3YLR207W MGE1P38523 228 aa3.37□□□□□ -1.87
HRD3YLR207W RRN7P40992 514 aa3.37□□□□□ -1.87
HRD3YLR207W ACS2P52910 683 aaKnown RBP3.37□□□□□ -1.87
HRD3YLR207W GLO3P38682 493 aaKnown RBP3.37□□□□□ -1.87
HRD3YLR207W CWC15Q03772 175 aaKnown RBP3.37□□□□□ -1.87
HRD3YLR207W PRT1P06103 763 aaKnown RBP3.36□□□□□ -1.87
HRD3YLR207W PDC1P06169 563 aaKnown RBP3.36□□□□□ -1.87
HRD3YLR207W SAP30P38429 201 aa3.36□□□□□ -1.87
HRD3YLR207W PTC2P39966 464 aaKnown RBP3.36□□□□□ -1.87
HRD3YLR207W ARH1P48360 493 aa3.36□□□□□ -1.87
HRD3YLR207W AGE1Q04412 482 aa3.36□□□□□ -1.87
HRD3YLR207W MIP1P15801 1254 aa3.36□□□□□ -1.87
HRD3YLR207W ATG1P53104 897 aa3.36□□□□□ -1.87
HRD3YLR207W YTA7P40340 1379 aa3.36□□□□□ -1.87
HRD3YLR207W THO2P53552 1597 aaKnown RBP3.36□□□□□ -1.87
HRD3YLR207W PPX1P38698 397 aa3.35□□□□□ -1.87
HRD3YLR207W HXT10P43581 546 aa3.35□□□□□ -1.87
HRD3YLR207W ROM1P53046 1155 aa3.35□□□□□ -1.87
HRD3YLR207W BNI4P53858 892 aa3.35□□□□□ -1.87
HRD3YLR207W BUD20Q08004 166 aaPredicted RBP3.35□□□□□ -1.87
HRD3YLR207W SPT23P35210 1082 aa3.35□□□□□ -1.87
HRD3YLR207W TPS3P38426 1054 aaKnown RBP3.35□□□□□ -1.87
HRD3YLR207W PAC1P39946 494 aaKnown RBP3.35□□□□□ -1.87
HRD3YLR207W SVF1Q05515 481 aa3.35□□□□□ -1.87
HRD3YLR207W ISR1Q06098 443 aaKnown RBP3.35□□□□□ -1.87
HRD3YLR207W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
HRD3YLR207W ATG2P53855 1592 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-DR4O74302 440 aa3.34□□□□□ -1.87
HRD3YLR207W SPT2P06843 333 aaPredicted RBP3.34□□□□□ -1.87
HRD3YLR207W TY1A-HP0C2I4 478 aaKnown RBP3.34□□□□□ -1.87
HRD3YLR207W TY1A-AP0CX57 440 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-PR1P0CX58 440 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-ORP0CX59 440 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-PR2P0CX60 440 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-DR5P0CX65 440 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-ER2P0CX66 440 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-GR3P0CX67 440 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-LR1P0CX68 440 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-MR2P0CX69 440 aa3.34□□□□□ -1.87
HRD3YLR207W KIP2P28743 706 aa3.34□□□□□ -1.87
HRD3YLR207W AIM9P40053 627 aaKnown RBP3.34□□□□□ -1.87
HRD3YLR207W QDR1P40475 563 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-JR2P47099 440 aa3.34□□□□□ -1.87
HRD3YLR207W ALD2P47771 506 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-DR1Q03856 440 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-ML1Q04706 440 aaKnown RBP3.34□□□□□ -1.87
HRD3YLR207W TY1A-BRQ12217 440 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-NL2Q12470 440 aa3.34□□□□□ -1.87
HRD3YLR207W TY1A-GR2Q12485 440 aa3.34□□□□□ -1.87
HRD3YLR207W PEP1P32319 1579 aa3.34□□□□□ -1.87
HRD3YLR207W SEC2P17065 759 aa3.34□□□□□ -1.88
HRD3YLR207W MDJ2P42834 146 aa3.34□□□□□ -1.88
HRD3YLR207W ACF4P47129 309 aa3.34□□□□□ -1.88
HRD3YLR207W YPR084WQ06821 456 aa3.34□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms