RNA–Protein interactions for RNA: YLR071C

RGR1, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene RGR1, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGR1YLR071C VMR1P38735 1592 aa3.58□□□□□ -1.84
RGR1YLR071C NUP188P52593 1655 aaKnown RBP3.58□□□□□ -1.84
RGR1YLR071C JSN1P47135 1091 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
RGR1YLR071C YBL113CQ7M4S9 792 aa3.58□□□□□ -1.84
RGR1YLR071C MIF2P35201 549 aa3.58□□□□□ -1.84
RGR1YLR071C TSR4P25040 408 aa3.57□□□□□ -1.84
RGR1YLR071C TFG1P41895 735 aaPredicted RBP3.57□□□□□ -1.84
RGR1YLR071C POL32P47110 350 aa3.57□□□□□ -1.84
RGR1YLR071C YNL108CP53929 270 aa3.57□□□□□ -1.84
RGR1YLR071C MSC6Q08818 692 aaKnown RBP3.57□□□□□ -1.84
RGR1YLR071C DCD1P06773 312 aa3.57□□□□□ -1.84
RGR1YLR071C RRP15Q06511 250 aaPredicted RBP3.57□□□□□ -1.84
RGR1YLR071C PSE1P32337 1089 aaKnown RBP3.57□□□□□ -1.84
RGR1YLR071C KTR1P27810 393 aaKnown RBP3.56□□□□□ -1.84
RGR1YLR071C CSE4P36012 229 aa3.56□□□□□ -1.84
RGR1YLR071C JIP5Q06214 492 aaPredicted RBP3.56□□□□□ -1.84
RGR1YLR071C SRP40P32583 406 aaPredicted RBP3.55□□□□□ -1.84
RGR1YLR071C NOP2P40991 618 aaKnown RBP3.55□□□□□ -1.84
RGR1YLR071C ZDS1P50111 915 aaKnown RBP3.55□□□□□ -1.84
RGR1YLR071C ERP5P38819 212 aa3.55□□□□□ -1.84
RGR1YLR071C SEC7P11075 2009 aaKnown RBP3.55□□□□□ -1.84
RGR1YLR071C SSB1P11484 613 aaKnown RBP3.55□□□□□ -1.84
RGR1YLR071C BCH2P36122 765 aa3.55□□□□□ -1.84
RGR1YLR071C EDS1P38073 919 aa3.55□□□□□ -1.84
RGR1YLR071C SSB2P40150 613 aaKnown RBP3.55□□□□□ -1.84
RGR1YLR071C TPM2P40414 161 aa3.55□□□□□ -1.84
RGR1YLR071C OYE2Q03558 400 aaKnown RBP3.55□□□□□ -1.84
RGR1YLR071C ATE1P16639 503 aa3.54□□□□□ -1.84
RGR1YLR071C TGL4P36165 910 aa3.54□□□□□ -1.84
RGR1YLR071C KIC1P38692 1080 aa3.54□□□□□ -1.84
RGR1YLR071C TYW1Q08960 810 aaKnown RBP3.54□□□□□ -1.84
RGR1YLR071C EPS1P40557 701 aa3.54□□□□□ -1.84
RGR1YLR071C TEA1P47988 759 aa3.54□□□□□ -1.84
RGR1YLR071C ENO1P00924 437 aaKnown RBP3.53□□□□□ -1.84
RGR1YLR071C YKL091CP33324 310 aaKnown RBP3.53□□□□□ -1.84
RGR1YLR071C VPS29P38759 282 aa3.53□□□□□ -1.84
RGR1YLR071C ALG12P53730 551 aa3.53□□□□□ -1.84
RGR1YLR071C POB3Q04636 552 aaKnown RBP3.53□□□□□ -1.84
RGR1YLR071C YRF1-2P40105 1681 aa3.53□□□□□ -1.84
RGR1YLR071C SUP45P12385 437 aaKnown RBP3.53□□□□□ -1.84
RGR1YLR071C YHL050CP38721 697 aa3.53□□□□□ -1.84
RGR1YLR071C YHR219WP38900 624 aa3.53□□□□□ -1.84
RGR1YLR071C VHR2P40041 505 aa3.53□□□□□ -1.84
RGR1YLR071C THI12P42883 340 aa3.53□□□□□ -1.84
RGR1YLR071C THI5P43534 340 aa3.53□□□□□ -1.84
RGR1YLR071C THI11P47183 340 aa3.53□□□□□ -1.84
RGR1YLR071C THI13Q07748 340 aa3.53□□□□□ -1.84
RGR1YLR071C YEL077CQ3E7X8 1277 aa3.53□□□□□ -1.84
RGR1YLR071C NUP192P47054 1683 aa3.53□□□□□ -1.84
RGR1YLR071C SEC8P32855 1065 aa3.53□□□□□ -1.84
RGR1YLR071C YDR090CQ03193 310 aa3.53□□□□□ -1.84
RGR1YLR071C MGE1P38523 228 aa3.52□□□□□ -1.85
RGR1YLR071C PPX1P38698 397 aa3.52□□□□□ -1.85
RGR1YLR071C PMC1P38929 1173 aaPredicted RBP3.52□□□□□ -1.85
RGR1YLR071C KAR5Q04746 504 aa3.52□□□□□ -1.85
RGR1YLR071C MAG2Q06436 670 aaKnown RBP3.52□□□□□ -1.85
RGR1YLR071C KRI1P42846 591 aaKnown RBP3.52□□□□□ -1.85
RGR1YLR071C RAD59Q12223 238 aa3.52□□□□□ -1.85
RGR1YLR071C CIT2P08679 460 aa3.51□□□□□ -1.85
RGR1YLR071C SPT5P27692 1063 aaKnown RBP3.51□□□□□ -1.85
RGR1YLR071C TY4A-JP47023 414 aa3.51□□□□□ -1.85
RGR1YLR071C MRX10Q05648 414 aa3.51□□□□□ -1.85
RGR1YLR071C YGL015CP33199 130 aa3.51□□□□□ -1.85
RGR1YLR071C GRS1P38088 690 aaKnown RBP3.51□□□□□ -1.85
RGR1YLR071C VAC8P39968 578 aa3.51□□□□□ -1.85
RGR1YLR071C KIP3P53086 805 aaKnown RBP3.51□□□□□ -1.85
RGR1YLR071C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
RGR1YLR071C YOL057WQ08225 711 aa3.51□□□□□ -1.85
RGR1YLR071C STH1P32597 1359 aa3.51□□□□□ -1.85
RGR1YLR071C ENO2P00925 437 aaKnown RBP3.51□□□□□ -1.85
RGR1YLR071C YGL081WP53156 320 aa3.51□□□□□ -1.85
RGR1YLR071C PKH3Q03306 898 aaPredicted RBP3.51□□□□□ -1.85
RGR1YLR071C STB3Q12427 513 aa3.5□□□□□ -1.85
RGR1YLR071C PTC3P34221 468 aaKnown RBP3.5□□□□□ -1.85
RGR1YLR071C YDL121CQ07541 149 aa3.5□□□□□ -1.85
RGR1YLR071C YJL049WP47048 450 aa3.49□□□□□ -1.85
RGR1YLR071C ECM23Q02710 187 aa3.49□□□□□ -1.85
RGR1YLR071C YMR196WQ04336 1088 aa3.49□□□□□ -1.85
RGR1YLR071C TMA64Q04600 565 aaKnown RBP3.49□□□□□ -1.85
RGR1YLR071C YGR161W-CQ3E744 92 aa3.49□□□□□ -1.85
RGR1YLR071C GAL11P19659 1081 aa3.49□□□□□ -1.85
RGR1YLR071C BDF1P35817 686 aa3.49□□□□□ -1.85
RGR1YLR071C IOC3P43596 787 aa3.49□□□□□ -1.85
RGR1YLR071C RIM21P48565 533 aa3.49□□□□□ -1.85
RGR1YLR071C BRE1Q07457 700 aaKnown RBP3.49□□□□□ -1.85
RGR1YLR071C WHI5Q12416 295 aa3.49□□□□□ -1.85
RGR1YLR071C CLB5P30283 435 aa3.49□□□□□ -1.85
RGR1YLR071C MDJ2P42834 146 aa3.49□□□□□ -1.85
RGR1YLR071C YJR107WP47145 328 aa3.49□□□□□ -1.85
RGR1YLR071C ALD3P54114 506 aa3.49□□□□□ -1.85
RGR1YLR071C TRL1P09880 827 aaKnown RBP3.48□□□□□ -1.85
RGR1YLR071C MET1P36150 593 aa3.48□□□□□ -1.85
RGR1YLR071C MAD1P40957 749 aa3.48□□□□□ -1.85
RGR1YLR071C YMR1P47147 688 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
RGR1YLR071C HST2P53686 357 aa3.48□□□□□ -1.85
RGR1YLR071C ALD6P54115 500 aaKnown RBP3.48□□□□□ -1.85
RGR1YLR071C YLR326WQ06170 240 aaKnown RBP3.48□□□□□ -1.85
RGR1YLR071C MMP1Q12372 583 aa3.48□□□□□ -1.85
RGR1YLR071C STI1P15705 589 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
RGR1YLR071C YDJ1P25491 409 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms