RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C RIX1P38883 763 aaPredicted RBP2.88□□□□□ -1.95
VPS13YLL040C SSK22P25390 1331 aaPredicted RBP2.88□□□□□ -1.95
VPS13YLL040C RTR1P40084 226 aaPredicted RBP2.88□□□□□ -1.95
VPS13YLL040C GYP7P48365 746 aa2.88□□□□□ -1.95
VPS13YLL040C YDR306CQ06640 478 aa2.87□□□□□ -1.95
VPS13YLL040C PET111P08468 800 aa2.87□□□□□ -1.95
VPS13YLL040C ASF1P32447 279 aa2.87□□□□□ -1.95
VPS13YLL040C OSH3P38713 996 aaKnown RBP2.87□□□□□ -1.95
VPS13YLL040C STU2P46675 888 aa2.87□□□□□ -1.95
VPS13YLL040C SPC110P32380 944 aa2.87□□□□□ -1.95
VPS13YLL040C NST1P53935 1240 aa2.87□□□□□ -1.95
VPS13YLL040C SET1P38827 1080 aaKnown RBP2.87□□□□□ -1.95
VPS13YLL040C NOP14Q99207 810 aaKnown RBP2.87□□□□□ -1.95
VPS13YLL040C TRK1P12685 1235 aa2.87□□□□□ -1.95
VPS13YLL040C STE11P23561 717 aa2.87□□□□□ -1.95
VPS13YLL040C PBY1P38254 753 aa2.87□□□□□ -1.95
VPS13YLL040C SAP155P43612 1002 aa2.87□□□□□ -1.95
VPS13YLL040C GEF1P37020 779 aa2.86□□□□□ -1.95
VPS13YLL040C YNR029CP53729 429 aaKnown RBP2.86□□□□□ -1.95
VPS13YLL040C KAR2P16474 682 aaKnown RBP2.86□□□□□ -1.95
VPS13YLL040C NTH2P35172 780 aa2.86□□□□□ -1.95
VPS13YLL040C YPL150WQ12152 901 aa2.86□□□□□ -1.95
VPS13YLL040C TYS1P36421 394 aaKnown RBP2.86□□□□□ -1.95
VPS13YLL040C TEA1P47988 759 aa2.86□□□□□ -1.95
VPS13YLL040C GCR2Q01722 534 aa2.86□□□□□ -1.95
VPS13YLL040C MPP10P47083 593 aaKnown RBP2.86□□□□□ -1.95
VPS13YLL040C COG8Q04632 607 aa2.86□□□□□ -1.95
VPS13YLL040C PSK2Q08217 1101 aa2.85□□□□□ -1.95
VPS13YLL040C TCD1P38756 429 aa2.85□□□□□ -1.95
VPS13YLL040C MDG1P53885 366 aa2.85□□□□□ -1.95
VPS13YLL040C SLN1P39928 1220 aaPredicted RBP2.85□□□□□ -1.95
VPS13YLL040C AKL1P38080 1108 aaKnown RBP2.85□□□□□ -1.95
VPS13YLL040C TPM1P17536 199 aaKnown RBP2.85□□□□□ -1.95
VPS13YLL040C SSF1P38789 453 aaPredicted RBP2.84□□□□□ -1.95
VPS13YLL040C ENV11P53246 860 aa2.84□□□□□ -1.95
VPS13YLL040C CTR9P89105 1077 aa2.84□□□□□ -1.95
VPS13YLL040C MTC5Q03897 1148 aa2.84□□□□□ -1.95
VPS13YLL040C VPS8P39702 1274 aa2.84□□□□□ -1.95
VPS13YLL040C PXL1P36166 706 aa2.84□□□□□ -1.96
VPS13YLL040C PES4P39684 611 aa2.84□□□□□ -1.96
VPS13YLL040C NOP58Q12499 511 aaKnown RBP2.84□□□□□ -1.96
VPS13YLL040C PXA1P41909 870 aa2.84□□□□□ -1.96
VPS13YLL040C SRS2P12954 1174 aa2.84□□□□□ -1.96
VPS13YLL040C MNN4P36044 1178 aa2.84□□□□□ -1.96
VPS13YLL040C CEP3P40969 608 aa2.83□□□□□ -1.96
VPS13YLL040C ECM23Q02710 187 aa2.83□□□□□ -1.96
VPS13YLL040C RNR2P09938 399 aaKnown RBP2.83□□□□□ -1.96
VPS13YLL040C VTC3Q02725 835 aa2.83□□□□□ -1.96
VPS13YLL040C LCD1Q04377 747 aa2.83□□□□□ -1.96
VPS13YLL040C YOL057WQ08225 711 aa2.83□□□□□ -1.96
VPS13YLL040C YML119WQ03208 357 aa2.83□□□□□ -1.96
VPS13YLL040C TTI1P36097 1038 aa2.83□□□□□ -1.96
VPS13YLL040C ARL1P38116 183 aaKnown RBP2.83□□□□□ -1.96
VPS13YLL040C MAK10Q02197 733 aa2.83□□□□□ -1.96
VPS13YLL040C NSE3Q05541 303 aa2.83□□□□□ -1.96
VPS13YLL040C DSD1P53095 428 aa2.83□□□□□ -1.96
VPS13YLL040C HSP104P31539 908 aaKnown RBP2.83□□□□□ -1.96
VPS13YLL040C AIM9P40053 627 aaKnown RBP2.82□□□□□ -1.96
VPS13YLL040C MCM3P24279 971 aaKnown RBP2.82□□□□□ -1.96
VPS13YLL040C RTT109Q07794 436 aa2.82□□□□□ -1.96
VPS13YLL040C CIR1P42940 261 aa2.82□□□□□ -1.96
VPS13YLL040C TFG2P41896 400 aaPredicted RBP2.82□□□□□ -1.96
VPS13YLL040C RPN12P32496 274 aa2.82□□□□□ -1.96
VPS13YLL040C UBP10P53874 792 aaPredicted RBP2.82□□□□□ -1.96
VPS13YLL040C OPI1P21957 404 aa2.82□□□□□ -1.96
VPS13YLL040C MAL13P53338 473 aa2.82□□□□□ -1.96
VPS13YLL040C URB1P34241 1764 aaKnown RBP2.81□□□□□ -1.96
VPS13YLL040C YHL017WP38745 532 aa2.81□□□□□ -1.96
VPS13YLL040C MRX12P47084 519 aa2.81□□□□□ -1.96
VPS13YLL040C TPD3P31383 635 aa2.81□□□□□ -1.96
VPS13YLL040C RRP1P35178 278 aaPredicted RBP2.81□□□□□ -1.96
VPS13YLL040C ITC1P53125 1264 aa2.81□□□□□ -1.96
VPS13YLL040C USO1P25386 1790 aa2.81□□□□□ -1.96
VPS13YLL040C CBP3P21560 335 aa2.81□□□□□ -1.96
VPS13YLL040C CST6P40535 587 aa2.81□□□□□ -1.96
VPS13YLL040C NOP8Q08287 484 aaPredicted RBP2.81□□□□□ -1.96
VPS13YLL040C KNS1P32350 737 aaPredicted RBP2.81□□□□□ -1.96
VPS13YLL040C CIN4P39110 191 aa2.81□□□□□ -1.96
VPS13YLL040C PPH3P32345 308 aa2.81□□□□□ -1.96
VPS13YLL040C TPS3P38426 1054 aaKnown RBP2.81□□□□□ -1.96
VPS13YLL040C HRQ1Q05549 1077 aa2.81□□□□□ -1.96
VPS13YLL040C DNM1P54861 757 aa2.8□□□□□ -1.96
VPS13YLL040C RSM25P40496 264 aa2.8□□□□□ -1.96
VPS13YLL040C SLM3Q12093 417 aa2.8□□□□□ -1.96
VPS13YLL040C AOS1Q06624 347 aa2.8□□□□□ -1.96
VPS13YLL040C TRL1P09880 827 aaKnown RBP2.8□□□□□ -1.96
VPS13YLL040C DDP1Q99321 188 aaKnown RBP2.8□□□□□ -1.96
VPS13YLL040C ZDS1P50111 915 aaKnown RBP2.8□□□□□ -1.96
VPS13YLL040C BOI2P39969 1040 aa2.8□□□□□ -1.96
VPS13YLL040C AVT3P36062 692 aa2.79□□□□□ -1.96
VPS13YLL040C PUF6Q04373 656 aaKnown RBP2.79□□□□□ -1.96
VPS13YLL040C SRT1Q03175 343 aa2.79□□□□□ -1.96
VPS13YLL040C CAB1Q04430 367 aa2.79□□□□□ -1.96
VPS13YLL040C YLR271WQ06152 274 aa2.79□□□□□ -1.96
VPS13YLL040C TUS1Q06412 1307 aa2.79□□□□□ -1.96
VPS13YLL040C ITT1Q04638 464 aa2.79□□□□□ -1.96
VPS13YLL040C DLD1P32891 587 aa2.79□□□□□ -1.96
VPS13YLL040C BUD16P39988 312 aa2.79□□□□□ -1.96
VPS13YLL040C MTC1P47018 478 aaKnown RBP2.79□□□□□ -1.96
VPS13YLL040C YPT11P48559 417 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms