RNA–Protein interactions for RNA: YKL205W

LOS1, Transcript of Nuclear pore protein, yeast

Gene LOS1, Length 3,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LOS1	YKL205W	FOX2	Q02207	900 aa	Known RBP	5.07	□□□□□ -1.6
LOS1	YKL205W	FAS2	P19097	1887 aa	Known RBP	5.07	□□□□□ -1.6
LOS1	YKL205W	THI22	Q06490	572 aa		5.07	□□□□□ -1.6
LOS1	YKL205W	XKS1	P42826	600 aa		5.07	□□□□□ -1.6
LOS1	YKL205W	GRX1	P25373	110 aa	Known RBP	5.06	□□□□□ -1.6
LOS1	YKL205W	GLN1	P32288	370 aa	Known RBP	5.06	□□□□□ -1.6
LOS1	YKL205W	KAR2	P16474	682 aa	Known RBP	5.06	□□□□□ -1.6
LOS1	YKL205W	PHM7	Q12252	991 aa		5.06	□□□□□ -1.6
LOS1	YKL205W	KCC4	P25389	1037 aa		5.05	□□□□□ -1.6
LOS1	YKL205W	AOS1	Q06624	347 aa		5.05	□□□□□ -1.6
LOS1	YKL205W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.04	□□□□□ -1.6	not detected
LOS1	YKL205W	PRP45	P28004	379 aa	Predicted RBP	5.04	□□□□□ -1.6
LOS1	YKL205W	DOT5	P40553	215 aa		5.04	□□□□□ -1.6
LOS1	YKL205W	UTP22	P53254	1237 aa	Predicted RBP	5.04	□□□□□ -1.6
LOS1	YKL205W	RPS9B	P05755	195 aa	Known RBP	5.03	□□□□□ -1.6
LOS1	YKL205W	DPS1	P04802	557 aa	Known RBP	5.03	□□□□□ -1.6
LOS1	YKL205W	RPS19A	P07280	144 aa	Known RBP	5.03	□□□□□ -1.6
LOS1	YKL205W	RPS19B	P07281	144 aa	Predicted RBP	5.03	□□□□□ -1.6
LOS1	YKL205W	SUI2	P20459	304 aa	Known RBP	5.03	□□□□□ -1.6
LOS1	YKL205W	YOL057W	Q08225	711 aa		5.03	□□□□□ -1.6
LOS1	YKL205W	GCD7	P32502	381 aa	Predicted RBP	5.02	□□□□□ -1.61
LOS1	YKL205W	ADE16	P54113	591 aa	Known RBP	5.02	□□□□□ -1.61
LOS1	YKL205W	OSM1	P21375	501 aa	Known RBP	5.02	□□□□□ -1.61
LOS1	YKL205W	SAP155	P43612	1002 aa		5.02	□□□□□ -1.61
LOS1	YKL205W	YPP1	P46951	817 aa		5.02	□□□□□ -1.61
LOS1	YKL205W	GYP7	P48365	746 aa		5.02	□□□□□ -1.61
LOS1	YKL205W	YLR271W	Q06152	274 aa		5.02	□□□□□ -1.61
LOS1	YKL205W	NPR2	P39923	615 aa		5.01	□□□□□ -1.61
LOS1	YKL205W	NPL4	P33755	580 aa		5.01	□□□□□ -1.61
LOS1	YKL205W	BDF1	P35817	686 aa		5.01	□□□□□ -1.61
LOS1	YKL205W	TOS1	P38288	455 aa		5	□□□□□ -1.61
LOS1	YKL205W	YIR014W	P40570	242 aa		5	□□□□□ -1.61
LOS1	YKL205W	MTC5	Q03897	1148 aa		5	□□□□□ -1.61
LOS1	YKL205W	NSE3	Q05541	303 aa		5	□□□□□ -1.61
LOS1	YKL205W	PMD1	P32634	1753 aa		4.99	□□□□□ -1.61
LOS1	YKL205W	SSP2	Q08646	371 aa		4.99	□□□□□ -1.61
LOS1	YKL205W	RTR1	P40084	226 aa	Predicted RBP	4.98	□□□□□ -1.61
LOS1	YKL205W	YIL092W	P40497	633 aa		4.98	□□□□□ -1.61
LOS1	YKL205W	DIB1	Q06819	143 aa	Predicted RBP	4.98	□□□□□ -1.61
LOS1	YKL205W	SWI1	P09547	1314 aa		4.98	□□□□□ -1.61
LOS1	YKL205W	YKL133C	P36066	463 aa		4.98	□□□□□ -1.61
LOS1	YKL205W	CTH1	P47976	325 aa		4.97	□□□□□ -1.61
LOS1	YKL205W	YDL144C	Q07589	356 aa		4.97	□□□□□ -1.61
LOS1	YKL205W	RTT109	Q07794	436 aa		4.97	□□□□□ -1.61
LOS1	YKL205W	ZDS1	P50111	915 aa	Known RBP	4.97	□□□□□ -1.61
LOS1	YKL205W	RVB2	Q12464	471 aa	Known RBP	4.97	□□□□□ -1.61
LOS1	YKL205W	CDC16	P09798	840 aa		4.97	□□□□□ -1.61
LOS1	YKL205W	APP1	P53933	587 aa		4.97	□□□□□ -1.61
LOS1	YKL205W	DNM1	P54861	757 aa		4.97	□□□□□ -1.61
LOS1	YKL205W	MAK21	Q12176	1025 aa	Known RBP	4.97	□□□□□ -1.61
LOS1	YKL205W	ADR1	P07248	1323 aa		4.96	□□□□□ -1.62
LOS1	YKL205W	DAL5	P15365	543 aa		4.96	□□□□□ -1.62
LOS1	YKL205W	ARG8	P18544	423 aa		4.96	□□□□□ -1.62
LOS1	YKL205W	CST6	P40535	587 aa		4.96	□□□□□ -1.62
LOS1	YKL205W	GSC2	P40989	1895 aa		4.96	□□□□□ -1.62
LOS1	YKL205W	BUD31	P25337	157 aa	Predicted RBP	4.95	□□□□□ -1.62
LOS1	YKL205W	SRT1	Q03175	343 aa		4.95	□□□□□ -1.62
LOS1	YKL205W	NYV1	Q12255	253 aa		4.95	□□□□□ -1.62
LOS1	YKL205W	UBP1	P25037	809 aa		4.95	□□□□□ -1.62
LOS1	YKL205W	RMT2	Q03305	412 aa		4.95	□□□□□ -1.62
LOS1	YKL205W	COQ4	O13525	335 aa		4.95	□□□□□ -1.62
LOS1	YKL205W	GAS4	Q08271	471 aa		4.95	□□□□□ -1.62
LOS1	YKL205W	MSB4	Q12317	492 aa		4.94	□□□□□ -1.62
LOS1	YKL205W	COB	P00163	385 aa		4.94	□□□□□ -1.62
LOS1	YKL205W	ECM16	Q04217	1267 aa	Known RBP	4.94	□□□□□ -1.62
LOS1	YKL205W	YPR204W	Q08995	1032 aa		4.94	□□□□□ -1.62
LOS1	YKL205W	GRE2	Q12068	342 aa	Known RBP	4.94	□□□□□ -1.62
LOS1	YKL205W	NOP53	Q12080	455 aa	Known RBP	4.93	□□□□□ -1.62
LOS1	YKL205W	MPP10	P47083	593 aa	Known RBP	4.93	□□□□□ -1.62
LOS1	YKL205W	PRP40	P33203	583 aa	Known RBP	4.92	□□□□□ -1.62
LOS1	YKL205W	GEF1	P37020	779 aa		4.92	□□□□□ -1.62
LOS1	YKL205W	BOI2	P39969	1040 aa		4.92	□□□□□ -1.62
LOS1	YKL205W	HSP104	P31539	908 aa	Known RBP	4.92	□□□□□ -1.62
LOS1	YKL205W	ERT1	P38140	529 aa		4.92	□□□□□ -1.62
LOS1	YKL205W	LAM6	Q08001	693 aa		4.92	□□□□□ -1.62
LOS1	YKL205W	FLO1	P32768	1537 aa		4.91	□□□□□ -1.62
LOS1	YKL205W	SIT4	P20604	311 aa		4.9	□□□□□ -1.62
LOS1	YKL205W	BUG1	Q12191	341 aa		4.9	□□□□□ -1.62
LOS1	YKL205W	PDR18	P53756	1333 aa		4.9	□□□□□ -1.62
LOS1	YKL205W	DCD1	P06773	312 aa		4.9	□□□□□ -1.63
LOS1	YKL205W	PFF1	P38244	976 aa		4.9	□□□□□ -1.63
LOS1	YKL205W	SSF1	P38789	453 aa	Predicted RBP	4.9	□□□□□ -1.63
LOS1	YKL205W	UBP16	Q02863	499 aa		4.9	□□□□□ -1.63
LOS1	YKL205W	ATG13	Q06628	738 aa		4.9	□□□□□ -1.63
LOS1	YKL205W	RAT1	Q02792	1006 aa	Known RBP	4.89	□□□□□ -1.63
LOS1	YKL205W	FRK1	Q03002	865 aa	Predicted RBP	4.89	□□□□□ -1.63
LOS1	YKL205W	UBX2	Q04228	584 aa		4.89	□□□□□ -1.63
LOS1	YKL205W	BMS1	Q08965	1183 aa	Known RBP	4.89	□□□□□ -1.63
LOS1	YKL205W	RAD50	P12753	1312 aa		4.89	□□□□□ -1.63
LOS1	YKL205W	ALD2	P47771	506 aa		4.89	□□□□□ -1.63
LOS1	YKL205W	TPD3	P31383	635 aa		4.89	□□□□□ -1.63
LOS1	YKL205W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
LOS1	YKL205W	YBP2	P53169	641 aa		4.88	□□□□□ -1.63
LOS1	YKL205W	ERO1	Q03103	563 aa		4.88	□□□□□ -1.63
LOS1	YKL205W	POM152	P39685	1337 aa		4.88	□□□□□ -1.63
LOS1	YKL205W	MRP7	P12687	371 aa		4.88	□□□□□ -1.63
LOS1	YKL205W	ALD3	P54114	506 aa		4.88	□□□□□ -1.63
LOS1	YKL205W	MYO1	P08964	1928 aa		4.88	□□□□□ -1.63
LOS1	YKL205W	TUM1	Q08686	304 aa	Known RBP	4.87	□□□□□ -1.63
LOS1	YKL205W	HAT1	Q12341	374 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms