RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI3YJL176C UGA2P38067 497 aa6.01□□□□□ -1.45
SWI3YJL176C RIM15P43565 1770 aa6.01□□□□□ -1.45
SWI3YJL176C NUP145P49687 1317 aa6□□□□□ -1.45
SWI3YJL176C AOS1Q06624 347 aa6□□□□□ -1.45
SWI3YJL176C SSA2P10592 639 aaKnown RBP6□□□□□ -1.45
SWI3YJL176C IOC4Q04213 475 aa6□□□□□ -1.45
SWI3YJL176C MSB4Q12317 492 aa6□□□□□ -1.45
SWI3YJL176C GRX1P25373 110 aaKnown RBP5.99□□□□□ -1.45
SWI3YJL176C RRP46P53256 223 aaPredicted RBP5.99□□□□□ -1.45
SWI3YJL176C CTH1P47976 325 aa5.99□□□□□ -1.45
SWI3YJL176C YBP2P53169 641 aa5.99□□□□□ -1.45
SWI3YJL176C RTR1P40084 226 aaPredicted RBP5.98□□□□□ -1.45
SWI3YJL176C NTH2P35172 780 aa5.98□□□□□ -1.45
SWI3YJL176C BDF1P35817 686 aa5.98□□□□□ -1.45
SWI3YJL176C RAD4P14736 754 aa5.97□□□□□ -1.45
SWI3YJL176C KCC4P25389 1037 aa5.97□□□□□ -1.45
SWI3YJL176C BUG1Q12191 341 aa5.97□□□□□ -1.45
SWI3YJL176C ALD3P54114 506 aa5.96□□□□□ -1.46
SWI3YJL176C GRE2Q12068 342 aaKnown RBP5.96□□□□□ -1.46
SWI3YJL176C RMT2Q03305 412 aa5.96□□□□□ -1.46
SWI3YJL176C PRD1P25375 712 aa5.95□□□□□ -1.46
SWI3YJL176C RPG1P38249 964 aaKnown RBP5.94□□□□□ -1.46
SWI3YJL176C YNL050CP53952 270 aa5.94□□□□□ -1.46
SWI3YJL176C UGA3P26370 528 aa5.94□□□□□ -1.46
SWI3YJL176C ALE1Q08548 619 aa5.93□□□□□ -1.46
SWI3YJL176C UTP22P53254 1237 aaPredicted RBP5.93□□□□□ -1.46
SWI3YJL176C NSE3Q05541 303 aa5.93□□□□□ -1.46
SWI3YJL176C TUM1Q08686 304 aaKnown RBP5.93□□□□□ -1.46
SWI3YJL176C MPP10P47083 593 aaKnown RBP5.92□□□□□ -1.46
SWI3YJL176C YDL144CQ07589 356 aa5.92□□□□□ -1.46
SWI3YJL176C ZDS1P50111 915 aaKnown RBP5.92□□□□□ -1.46
SWI3YJL176C MDG1P53885 366 aa5.92□□□□□ -1.46
SWI3YJL176C THI22Q06490 572 aa5.92□□□□□ -1.46
SWI3YJL176C NOP53Q12080 455 aaKnown RBP5.92□□□□□ -1.46
SWI3YJL176C MAM1P40065 302 aa5.91□□□□□ -1.46
SWI3YJL176C PRY3P47033 881 aa5.91□□□□□ -1.46
SWI3YJL176C LYS2P07702 1392 aa5.91□□□□□ -1.46
SWI3YJL176C TOS1P38288 455 aa5.9□□□□□ -1.47
SWI3YJL176C TEA1P47988 759 aa5.9□□□□□ -1.47
SWI3YJL176C HPC2Q01448 625 aa5.9□□□□□ -1.47
SWI3YJL176C BUD27P43573 796 aaKnown RBP RIP-Chip data5.89□□□□□ -1.47not detected
SWI3YJL176C RTT109Q07794 436 aa5.89□□□□□ -1.47
SWI3YJL176C SSP2Q08646 371 aa5.89□□□□□ -1.47
SWI3YJL176C PHM7Q12252 991 aa5.89□□□□□ -1.47
SWI3YJL176C NYV1Q12255 253 aa5.89□□□□□ -1.47
SWI3YJL176C RPP0P05317 312 aaKnown RBP5.89□□□□□ -1.47
SWI3YJL176C TPD3P31383 635 aa5.88□□□□□ -1.47
SWI3YJL176C RRT14P40470 206 aa5.88□□□□□ -1.47
SWI3YJL176C SAP155P43612 1002 aa5.88□□□□□ -1.47
SWI3YJL176C GYP7P48365 746 aa5.88□□□□□ -1.47
SWI3YJL176C BMS1Q08965 1183 aaKnown RBP5.88□□□□□ -1.47
SWI3YJL176C COQ4O13525 335 aa5.88□□□□□ -1.47
SWI3YJL176C YFR016CP43597 1233 aaKnown RBP5.88□□□□□ -1.47
SWI3YJL176C HEF3P53978 1044 aaKnown RBP5.88□□□□□ -1.47
SWI3YJL176C SER1P33330 395 aaKnown RBP5.87□□□□□ -1.47
SWI3YJL176C YBR287WP38355 427 aa5.87□□□□□ -1.47
SWI3YJL176C UTP10P42945 1769 aaKnown RBP5.87□□□□□ -1.47
SWI3YJL176C RIX7Q07844 837 aaKnown RBP5.87□□□□□ -1.47
SWI3YJL176C VPS27P40343 622 aaKnown RBP5.86□□□□□ -1.47
SWI3YJL176C MSN5P52918 1224 aa5.86□□□□□ -1.47
SWI3YJL176C YGL082WP53155 381 aa5.85□□□□□ -1.47
SWI3YJL176C YOL057WQ08225 711 aa5.85□□□□□ -1.47
SWI3YJL176C CTI6Q08923 506 aa5.85□□□□□ -1.47
SWI3YJL176C LPD1P09624 499 aaKnown RBP5.85□□□□□ -1.47
SWI3YJL176C SUI2P20459 304 aaKnown RBP5.85□□□□□ -1.47
SWI3YJL176C CDC45Q08032 650 aa5.85□□□□□ -1.47
SWI3YJL176C EAF6P47128 113 aa5.84□□□□□ -1.47
SWI3YJL176C RAT1Q02792 1006 aaKnown RBP5.84□□□□□ -1.47
SWI3YJL176C VPS64Q03944 604 aa5.84□□□□□ -1.47
SWI3YJL176C SSA1P10591 642 aaKnown RBP5.84□□□□□ -1.48
SWI3YJL176C SRT1Q03175 343 aa5.84□□□□□ -1.48
SWI3YJL176C ARG8P18544 423 aa5.83□□□□□ -1.48
SWI3YJL176C APL2P36000 726 aaPredicted RBP5.83□□□□□ -1.48
SWI3YJL176C ZDS2P54786 942 aa5.83□□□□□ -1.48
SWI3YJL176C YPR204WQ08995 1032 aa5.83□□□□□ -1.48
SWI3YJL176C CTT1P06115 562 aa5.82□□□□□ -1.48
SWI3YJL176C YKL222CP35995 705 aa5.82□□□□□ -1.48
SWI3YJL176C DNM1P54861 757 aa5.82□□□□□ -1.48
SWI3YJL176C DIB1Q06819 143 aaPredicted RBP5.82□□□□□ -1.48
SWI3YJL176C DCD1P06773 312 aa5.82□□□□□ -1.48
SWI3YJL176C ERT1P38140 529 aa5.82□□□□□ -1.48
SWI3YJL176C NSR1P27476 414 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
SWI3YJL176C PFF1P38244 976 aa5.81□□□□□ -1.48
SWI3YJL176C YER156CP40093 338 aaKnown RBP5.81□□□□□ -1.48
SWI3YJL176C YLR271WQ06152 274 aa5.81□□□□□ -1.48
SWI3YJL176C CST6P40535 587 aa5.81□□□□□ -1.48
SWI3YJL176C YDR306CQ06640 478 aa5.81□□□□□ -1.48
SWI3YJL176C BDF2Q07442 638 aa5.81□□□□□ -1.48
SWI3YJL176C SSK22P25390 1331 aaPredicted RBP5.8□□□□□ -1.48
SWI3YJL176C MRP7P12687 371 aa5.8□□□□□ -1.48
SWI3YJL176C CWH41P53008 833 aa5.8□□□□□ -1.48
SWI3YJL176C PKH1Q03407 766 aa5.8□□□□□ -1.48
SWI3YJL176C IRC3Q06683 689 aa5.8□□□□□ -1.48
SWI3YJL176C MAK21Q12176 1025 aaKnown RBP5.8□□□□□ -1.48
SWI3YJL176C RVB2Q12464 471 aaKnown RBP5.8□□□□□ -1.48
SWI3YJL176C SWI1P09547 1314 aa5.8□□□□□ -1.48
SWI3YJL176C YRB30P53107 440 aaPredicted RBP5.8□□□□□ -1.48
SWI3YJL176C HAT1Q12341 374 aa5.8□□□□□ -1.48
SWI3YJL176C NUP133P36161 1157 aa5.79□□□□□ -1.48
SWI3YJL176C SMY1P32364 656 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 57.8 ms