RNA–Protein interactions for RNA: YJL053W

PEP8, Transcript of Vacuolar protein component of the retromer, yeastyeast

Gene PEP8, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP8YJL053W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
PEP8YJL053W DIT2P21595 489 aa6.89□□□□□ -1.31
PEP8YJL053W SCJ1P25303 377 aa6.89□□□□□ -1.31
PEP8YJL053W DLD1P32891 587 aa6.87□□□□□ -1.31
PEP8YJL053W MMP1Q12372 583 aa6.87□□□□□ -1.31
PEP8YJL053W DPH6Q12429 685 aa6.87□□□□□ -1.31
PEP8YJL053W TCB1Q12466 1186 aa6.87□□□□□ -1.31
PEP8YJL053W LSB3P43603 459 aaKnown RBP6.86□□□□□ -1.31
PEP8YJL053W HST2P53686 357 aa6.86□□□□□ -1.31
PEP8YJL053W YJR098CP47139 656 aa6.85□□□□□ -1.31
PEP8YJL053W VAC17P25591 423 aa6.84□□□□□ -1.31
PEP8YJL053W YBL086CP38177 466 aa6.84□□□□□ -1.31
PEP8YJL053W ROG3P43602 733 aa6.84□□□□□ -1.31
PEP8YJL053W OSH7P38755 437 aa6.83□□□□□ -1.32
PEP8YJL053W APP1P53933 587 aa6.83□□□□□ -1.32
PEP8YJL053W GLN1P32288 370 aaKnown RBP6.82□□□□□ -1.32
PEP8YJL053W TY1A-MR1Q04215 440 aa6.81□□□□□ -1.32
PEP8YJL053W PHM7Q12252 991 aa6.81□□□□□ -1.32
PEP8YJL053W ESS1P22696 170 aa6.79□□□□□ -1.32
PEP8YJL053W LYS5P50113 272 aa6.79□□□□□ -1.32
PEP8YJL053W ATF2P53296 535 aa6.78□□□□□ -1.32
PEP8YJL053W MDJ1P35191 511 aa6.76□□□□□ -1.33
PEP8YJL053W ITT1Q04638 464 aa6.76□□□□□ -1.33
PEP8YJL053W EMW1P42842 904 aaKnown RBP6.75□□□□□ -1.33
PEP8YJL053W NSG2P53898 299 aa6.74□□□□□ -1.33
PEP8YJL053W YJU3P28321 313 aa6.73□□□□□ -1.33
PEP8YJL053W MKS1P34072 584 aa6.73□□□□□ -1.33
PEP8YJL053W SAS10Q12136 610 aaPredicted RBP6.73□□□□□ -1.33
PEP8YJL053W CCP1P00431 361 aa6.72□□□□□ -1.33
PEP8YJL053W JJJ3P47138 172 aa6.71□□□□□ -1.34
PEP8YJL053W BDS1Q08347 646 aa6.71□□□□□ -1.34
PEP8YJL053W DFG5Q05031 458 aa6.7□□□□□ -1.34
PEP8YJL053W THI72Q08579 599 aa6.7□□□□□ -1.34
PEP8YJL053W NRD1P53617 575 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34 RIP-Chip
PEP8YJL053W ARG8P18544 423 aa6.67□□□□□ -1.34
PEP8YJL053W PKH3Q03306 898 aaPredicted RBP6.67□□□□□ -1.34
PEP8YJL053W AI1P03875 834 aa6.66□□□□□ -1.34
PEP8YJL053W RSC30P38781 883 aa6.66□□□□□ -1.34
PEP8YJL053W NAM8Q00539 523 aaKnown RBP6.63□□□□□ -1.35
PEP8YJL053W SBP1P10080 294 aaKnown RBP6.62□□□□□ -1.35
PEP8YJL053W FBP26P32604 452 aa6.62□□□□□ -1.35
PEP8YJL053W FIG4P42837 879 aa6.62□□□□□ -1.35
PEP8YJL053W CDC19P00549 500 aaKnown RBP6.61□□□□□ -1.35
PEP8YJL053W CEM1P39525 442 aa6.61□□□□□ -1.35
PEP8YJL053W CUZ1P53899 274 aa6.6□□□□□ -1.35
PEP8YJL053W TEC1P18412 486 aa6.59□□□□□ -1.35
PEP8YJL053W CCT8P47079 568 aaKnown RBP6.59□□□□□ -1.35
PEP8YJL053W VTC4P47075 721 aa6.58□□□□□ -1.36
PEP8YJL053W YPR053CQ6Q5F3 151 aa6.58□□□□□ -1.36
PEP8YJL053W GLC3P32775 704 aa6.57□□□□□ -1.36
PEP8YJL053W RPP2BP02400 110 aaKnown RBP6.56□□□□□ -1.36
PEP8YJL053W STE6P12866 1290 aa6.56□□□□□ -1.36
PEP8YJL053W DMA1P38823 416 aa6.56□□□□□ -1.36
PEP8YJL053W DLD3P39976 496 aaKnown RBP6.56□□□□□ -1.36
PEP8YJL053W YFL066CP43538 392 aa6.56□□□□□ -1.36
PEP8YJL053W DAL1P32375 460 aa6.54□□□□□ -1.36
PEP8YJL053W YNR021WP53723 404 aaKnown RBP6.54□□□□□ -1.36
PEP8YJL053W ADE12P80210 433 aaKnown RBP6.54□□□□□ -1.36
PEP8YJL053W KTR1P27810 393 aaKnown RBP6.53□□□□□ -1.36
PEP8YJL053W CSN12P47130 423 aa6.53□□□□□ -1.36
PEP8YJL053W YMR265CQ03508 461 aaKnown RBP6.53□□□□□ -1.36
PEP8YJL053W ATG20Q07528 640 aa6.52□□□□□ -1.37
PEP8YJL053W ISU1Q03020 165 aa6.51□□□□□ -1.37
PEP8YJL053W YMR187CQ03236 431 aa6.5□□□□□ -1.37
PEP8YJL053W DIT1P21623 536 aa6.49□□□□□ -1.37
PEP8YJL053W GUT2P32191 649 aa6.49□□□□□ -1.37
PEP8YJL053W KRE33P53914 1056 aaKnown RBP6.49□□□□□ -1.37
PEP8YJL053W RAD59Q12223 238 aa6.49□□□□□ -1.37
PEP8YJL053W UBP15P50101 1230 aa6.48□□□□□ -1.37
PEP8YJL053W TDA6Q06466 467 aa6.48□□□□□ -1.37
PEP8YJL053W YPR084WQ06821 456 aa6.47□□□□□ -1.37
PEP8YJL053W SYT1Q06836 1226 aa6.47□□□□□ -1.37
PEP8YJL053W SKN7P38889 622 aa6.46□□□□□ -1.38
PEP8YJL053W SBE2P42223 864 aaKnown RBP6.46□□□□□ -1.38
PEP8YJL053W YNR014WP53719 212 aa6.46□□□□□ -1.38
PEP8YJL053W STE20Q03497 939 aaKnown RBP6.43□□□□□ -1.38
PEP8YJL053W AIM7Q12156 149 aa6.43□□□□□ -1.38
PEP8YJL053W YDR461C-AQ2V2P7 80 aa6.42□□□□□ -1.38
PEP8YJL053W AHP1P38013 176 aaKnown RBP6.41□□□□□ -1.38
PEP8YJL053W MSN5P52918 1224 aa6.41□□□□□ -1.38
PEP8YJL053W DAT1P13483 248 aaKnown RBP6.4□□□□□ -1.38
PEP8YJL053W MAK16P10962 306 aaPredicted RBP6.39□□□□□ -1.39
PEP8YJL053W SSN3P39073 555 aa6.37□□□□□ -1.39
PEP8YJL053W FRA1Q07825 749 aa6.37□□□□□ -1.39
PEP8YJL053W WTM2Q12206 467 aa6.37□□□□□ -1.39
PEP8YJL053W SLA1P32790 1244 aa6.36□□□□□ -1.39
PEP8YJL053W MCX1P38323 520 aaPredicted RBP6.36□□□□□ -1.39
PEP8YJL053W BOI2P39969 1040 aa6.36□□□□□ -1.39
PEP8YJL053W ALA1P40825 983 aaKnown RBP6.36□□□□□ -1.39
PEP8YJL053W SSA2P10592 639 aaKnown RBP6.35□□□□□ -1.39
PEP8YJL053W FPS1P23900 669 aa6.35□□□□□ -1.39
PEP8YJL053W TBS1P38114 1094 aa6.35□□□□□ -1.39
PEP8YJL053W NAF1P53919 492 aaKnown RBP6.35□□□□□ -1.39
PEP8YJL053W ISR1Q06098 443 aaKnown RBP6.35□□□□□ -1.39
PEP8YJL053W UTR2P32623 467 aa6.33□□□□□ -1.4
PEP8YJL053W MET1P36150 593 aa6.33□□□□□ -1.4
PEP8YJL053W UTP7P40055 554 aaKnown RBP6.32□□□□□ -1.4
PEP8YJL053W TY1A-DR3Q12441 440 aa6.32□□□□□ -1.4
PEP8YJL053W GPM1P00950 247 aaKnown RBP6.31□□□□□ -1.4
PEP8YJL053W YCK2P23292 546 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms