RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C FRA1Q07825 749 aa8.4□□□□□ -1.06
YIR043CYIR043C ATG3P40344 310 aa8.39□□□□□ -1.07
YIR043CYIR043C RRN7P40992 514 aa8.39□□□□□ -1.07
YIR043CYIR043C KXD1P53158 218 aa8.39□□□□□ -1.07
YIR043CYIR043C PRT1P06103 763 aaKnown RBP8.38□□□□□ -1.07
YIR043CYIR043C PDC1P06169 563 aaKnown RBP8.38□□□□□ -1.07
YIR043CYIR043C SPT23P35210 1082 aa8.38□□□□□ -1.07
YIR043CYIR043C PTC2P39966 464 aaKnown RBP8.38□□□□□ -1.07
YIR043CYIR043C PAT1P25644 796 aaKnown RBP8.37□□□□□ -1.07
YIR043CYIR043C YPR084WQ06821 456 aa8.37□□□□□ -1.07
YIR043CYIR043C SOH1P38633 127 aa8.36□□□□□ -1.07
YIR043CYIR043C FKH1P40466 484 aa8.36□□□□□ -1.07
YIR043CYIR043C SEN54Q02825 467 aaPredicted RBP8.36□□□□□ -1.07
YIR043CYIR043C YPR015CQ12531 247 aa8.36□□□□□ -1.07
YIR043CYIR043C YEL077CQ3E7X8 1277 aa8.36□□□□□ -1.07
YIR043CYIR043C PHO87P25360 923 aa8.35□□□□□ -1.07
YIR043CYIR043C HEM3P28789 327 aa8.33□□□□□ -1.08
YIR043CYIR043C HXT10P43581 546 aa8.33□□□□□ -1.08
YIR043CYIR043C YBL113CQ7M4S9 792 aa8.33□□□□□ -1.08
YIR043CYIR043C HAP4P14064 554 aa8.32□□□□□ -1.08
YIR043CYIR043C SPT16P32558 1035 aaKnown RBP8.32□□□□□ -1.08
YIR043CYIR043C KAR5Q04746 504 aa8.32□□□□□ -1.08
YIR043CYIR043C UTP13Q05946 817 aaKnown RBP8.32□□□□□ -1.08
YIR043CYIR043C ACS2P52910 683 aaKnown RBP8.31□□□□□ -1.08
YIR043CYIR043C STM1P39015 273 aaKnown RBP8.3□□□□□ -1.08
YIR043CYIR043C APL6P46682 809 aa8.3□□□□□ -1.08
YIR043CYIR043C VAC17P25591 423 aa8.29□□□□□ -1.08
YIR043CYIR043C TPS3P38426 1054 aaKnown RBP8.29□□□□□ -1.08
YIR043CYIR043C ERP5P38819 212 aa8.29□□□□□ -1.08
YIR043CYIR043C SNU71P53207 620 aaKnown RBP8.29□□□□□ -1.08
YIR043CYIR043C NOP7P53261 605 aaKnown RBP8.29□□□□□ -1.08
YIR043CYIR043C CWC15Q03772 175 aaKnown RBP8.29□□□□□ -1.08
YIR043CYIR043C ROM1P53046 1155 aa8.28□□□□□ -1.08
YIR043CYIR043C PUF6Q04373 656 aaKnown RBP8.28□□□□□ -1.08
YIR043CYIR043C YML082WQ04533 649 aaKnown RBP8.28□□□□□ -1.08
YIR043CYIR043C PDI1P17967 522 aaKnown RBP8.27□□□□□ -1.09
YIR043CYIR043C IPL1P38991 367 aa8.27□□□□□ -1.09
YIR043CYIR043C RRD1P40454 393 aaKnown RBP8.27□□□□□ -1.09
YIR043CYIR043C AIR2Q12476 344 aaKnown RBP8.27□□□□□ -1.09
YIR043CYIR043C TSC13Q99190 310 aa8.27□□□□□ -1.09
YIR043CYIR043C IXR1P33417 597 aa8.26□□□□□ -1.09
YIR043CYIR043C ITT1Q04638 464 aa8.26□□□□□ -1.09
YIR043CYIR043C TPD3P31383 635 aa8.25□□□□□ -1.09
YIR043CYIR043C RRN6P32786 894 aa8.25□□□□□ -1.09
YIR043CYIR043C PNP1Q05788 311 aa8.25□□□□□ -1.09
YIR043CYIR043C ISR1Q06098 443 aaKnown RBP8.25□□□□□ -1.09
YIR043CYIR043C PUN1Q06991 263 aa8.25□□□□□ -1.09
YIR043CYIR043C GAS4Q08271 471 aa8.25□□□□□ -1.09
YIR043CYIR043C SEC20P28791 383 aa8.24□□□□□ -1.09
YIR043CYIR043C GRS1P38088 690 aaKnown RBP8.24□□□□□ -1.09
YIR043CYIR043C MIP1P15801 1254 aa8.23□□□□□ -1.09
YIR043CYIR043C PRE3P38624 215 aa8.23□□□□□ -1.09
YIR043CYIR043C GYP1Q08484 637 aa8.23□□□□□ -1.09
YIR043CYIR043C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
YIR043CYIR043C HAL5P38970 855 aaKnown RBP8.22□□□□□ -1.09
YIR043CYIR043C YFL034WP43564 1073 aa8.22□□□□□ -1.09
YIR043CYIR043C MOD5P07884 428 aa8.21□□□□□ -1.1
YIR043CYIR043C VAN1P23642 535 aa8.21□□□□□ -1.1
YIR043CYIR043C MSC6Q08818 692 aaKnown RBP8.21□□□□□ -1.1
YIR043CYIR043C TRL1P09880 827 aaKnown RBP8.2□□□□□ -1.1
YIR043CYIR043C SRS2P12954 1174 aa8.2□□□□□ -1.1
YIR043CYIR043C AIM9P40053 627 aaKnown RBP8.2□□□□□ -1.1
YIR043CYIR043C ATG20Q07528 640 aa8.2□□□□□ -1.1
YIR043CYIR043C BMT6Q12291 365 aa8.2□□□□□ -1.1
YIR043CYIR043C FUR4P05316 633 aaKnown RBP8.19□□□□□ -1.1
YIR043CYIR043C BUD31P25337 157 aaPredicted RBP8.19□□□□□ -1.1
YIR043CYIR043C KIP2P28743 706 aa8.19□□□□□ -1.1
YIR043CYIR043C YHL050CP38721 697 aa8.19□□□□□ -1.1
YIR043CYIR043C YHR219WP38900 624 aa8.19□□□□□ -1.1
YIR043CYIR043C SAS4Q04003 481 aa8.19□□□□□ -1.1
YIR043CYIR043C HDA3Q06623 655 aa8.19□□□□□ -1.1
YIR043CYIR043C BOL3P39724 118 aa8.18□□□□□ -1.1
YIR043CYIR043C MDJ2P42834 146 aa8.18□□□□□ -1.1
YIR043CYIR043C TRS33Q99394 268 aa8.18□□□□□ -1.1
YIR043CYIR043C CHL1P22516 861 aaPredicted RBP8.17□□□□□ -1.1
YIR043CYIR043C ASF1P32447 279 aa8.17□□□□□ -1.1
YIR043CYIR043C ATG1P53104 897 aa8.17□□□□□ -1.1
YIR043CYIR043C NTH2P35172 780 aa8.16□□□□□ -1.1
YIR043CYIR043C MET10P39692 1035 aa8.16□□□□□ -1.1
YIR043CYIR043C YJL171CP46992 396 aa8.16□□□□□ -1.1
YIR043CYIR043C PAM1P37304 830 aaKnown RBP8.15□□□□□ -1.1
YIR043CYIR043C GLO3P38682 493 aaKnown RBP8.15□□□□□ -1.1
YIR043CYIR043C THI12P42883 340 aa8.15□□□□□ -1.1
YIR043CYIR043C THI5P43534 340 aa8.15□□□□□ -1.1
YIR043CYIR043C THI11P47183 340 aa8.15□□□□□ -1.1
YIR043CYIR043C THI13Q07748 340 aa8.15□□□□□ -1.1
YIR043CYIR043C ALD4P46367 519 aaKnown RBP8.14□□□□□ -1.11
YIR043CYIR043C APP1P53933 587 aa8.14□□□□□ -1.11
YIR043CYIR043C QDR1P40475 563 aa8.13□□□□□ -1.11
YIR043CYIR043C PUS5Q06244 254 aa8.13□□□□□ -1.11
YIR043CYIR043C MRF1P30775 413 aaPredicted RBP8.12□□□□□ -1.11
YIR043CYIR043C CWH41P53008 833 aa8.12□□□□□ -1.11
YIR043CYIR043C CYT1P07143 309 aa8.11□□□□□ -1.11
YIR043CYIR043C RPS6AP0CX37 236 aaKnown RBP8.11□□□□□ -1.11
YIR043CYIR043C RPS6BP0CX38 236 aaPredicted RBP8.11□□□□□ -1.11
YIR043CYIR043C PPX1P38698 397 aa8.11□□□□□ -1.11
YIR043CYIR043C POL32P47110 350 aa8.11□□□□□ -1.11
YIR043CYIR043C ALD2P47771 506 aa8.11□□□□□ -1.11
YIR043CYIR043C AIM44Q99299 758 aa8.11□□□□□ -1.11
YIR043CYIR043C SUV3P32580 737 aa8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms