RNA–Protein interactions for RNA: YIL170W

HXT12, Transcript of Possible pseudogene in strain S288C, yeast

Gene HXT12, Length 1,374 nt, Biotype pseudogene, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HXT12	YIL170W	CTH1	P47976	325 aa		11.84	□□□□□ -0.51
HXT12	YIL170W	YBP2	P53169	641 aa		11.84	□□□□□ -0.51
HXT12	YIL170W	MSB4	Q12317	492 aa		11.84	□□□□□ -0.51
HXT12	YIL170W	NUP145	P49687	1317 aa		11.84	□□□□□ -0.51
HXT12	YIL170W	RRP46	P53256	223 aa	Predicted RBP	11.83	□□□□□ -0.52
HXT12	YIL170W	AOS1	Q06624	347 aa		11.83	□□□□□ -0.52
HXT12	YIL170W	GTT3	P39996	337 aa		11.82	□□□□□ -0.52
HXT12	YIL170W	RTR1	P40084	226 aa	Predicted RBP	11.82	□□□□□ -0.52
HXT12	YIL170W	CTF4	Q01454	927 aa		11.81	□□□□□ -0.52
HXT12	YIL170W	GRX1	P25373	110 aa	Known RBP	11.8	□□□□□ -0.52
HXT12	YIL170W	NTH2	P35172	780 aa		11.79	□□□□□ -0.52
HXT12	YIL170W	GRE2	Q12068	342 aa	Known RBP	11.78	□□□□□ -0.52
HXT12	YIL170W	BUG1	Q12191	341 aa		11.78	□□□□□ -0.52
HXT12	YIL170W	KCC4	P25389	1037 aa		11.77	□□□□□ -0.53
HXT12	YIL170W	BDF1	P35817	686 aa		11.77	□□□□□ -0.53
HXT12	YIL170W	RPG1	P38249	964 aa	Known RBP	11.77	□□□□□ -0.53
HXT12	YIL170W	ALE1	Q08548	619 aa		11.77	□□□□□ -0.53
HXT12	YIL170W	ALD3	P54114	506 aa		11.76	□□□□□ -0.53
HXT12	YIL170W	TUM1	Q08686	304 aa	Known RBP	11.76	□□□□□ -0.53
HXT12	YIL170W	RMT2	Q03305	412 aa		11.75	□□□□□ -0.53
HXT12	YIL170W	RAD4	P14736	754 aa		11.74	□□□□□ -0.53
HXT12	YIL170W	MPP10	P47083	593 aa	Known RBP	11.74	□□□□□ -0.53
HXT12	YIL170W	PRD1	P25375	712 aa		11.73	□□□□□ -0.53
HXT12	YIL170W	HPC2	Q01448	625 aa		11.71	□□□□□ -0.53
HXT12	YIL170W	YBR287W	P38355	427 aa		11.7	□□□□□ -0.54
HXT12	YIL170W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	11.7	□□□□□ -0.54	not detected
HXT12	YIL170W	YDL144C	Q07589	356 aa		11.7	□□□□□ -0.54
HXT12	YIL170W	YNL050C	P53952	270 aa		11.69	□□□□□ -0.54
HXT12	YIL170W	NOP53	Q12080	455 aa	Known RBP	11.69	□□□□□ -0.54
HXT12	YIL170W	UGA3	P26370	528 aa		11.68	□□□□□ -0.54
HXT12	YIL170W	ZDS1	P50111	915 aa	Known RBP	11.68	□□□□□ -0.54
HXT12	YIL170W	NSE3	Q05541	303 aa		11.68	□□□□□ -0.54
HXT12	YIL170W	TEA1	P47988	759 aa		11.67	□□□□□ -0.54
HXT12	YIL170W	THI22	Q06490	572 aa		11.67	□□□□□ -0.54
HXT12	YIL170W	UTP22	P53254	1237 aa	Predicted RBP	11.67	□□□□□ -0.54
HXT12	YIL170W	CTI6	Q08923	506 aa		11.67	□□□□□ -0.54
HXT12	YIL170W	SER1	P33330	395 aa	Known RBP	11.66	□□□□□ -0.54
HXT12	YIL170W	RRT14	P40470	206 aa		11.66	□□□□□ -0.54
HXT12	YIL170W	TPD3	P31383	635 aa		11.65	□□□□□ -0.55
HXT12	YIL170W	IOC4	Q04213	475 aa		11.65	□□□□□ -0.55
HXT12	YIL170W	RTT109	Q07794	436 aa		11.65	□□□□□ -0.55
HXT12	YIL170W	RIX7	Q07844	837 aa	Known RBP	11.65	□□□□□ -0.55
HXT12	YIL170W	TOS1	P38288	455 aa		11.64	□□□□□ -0.55
HXT12	YIL170W	NYV1	Q12255	253 aa		11.64	□□□□□ -0.55
HXT12	YIL170W	SAP155	P43612	1002 aa		11.63	□□□□□ -0.55
HXT12	YIL170W	YGL082W	P53155	381 aa		11.63	□□□□□ -0.55
HXT12	YIL170W	BMS1	Q08965	1183 aa	Known RBP	11.63	□□□□□ -0.55
HXT12	YIL170W	COQ4	O13525	335 aa		11.62	□□□□□ -0.55
HXT12	YIL170W	MAM1	P40065	302 aa		11.62	□□□□□ -0.55
HXT12	YIL170W	MDG1	P53885	366 aa		11.62	□□□□□ -0.55
HXT12	YIL170W	EAF6	P47128	113 aa		11.61	□□□□□ -0.55
HXT12	YIL170W	VPS64	Q03944	604 aa		11.61	□□□□□ -0.55
HXT12	YIL170W	SSP2	Q08646	371 aa		11.61	□□□□□ -0.55
HXT12	YIL170W	YFR016C	P43597	1233 aa	Known RBP	11.6	□□□□□ -0.55
HXT12	YIL170W	MSN5	P52918	1224 aa		11.6	□□□□□ -0.55
HXT12	YIL170W	ZDS2	P54786	942 aa		11.6	□□□□□ -0.55
HXT12	YIL170W	UTP10	P42945	1769 aa	Known RBP	11.6	□□□□□ -0.55
HXT12	YIL170W	GYP7	P48365	746 aa		11.59	□□□□□ -0.55
HXT12	YIL170W	PHM7	Q12252	991 aa		11.59	□□□□□ -0.55
HXT12	YIL170W	APL2	P36000	726 aa	Predicted RBP	11.58	□□□□□ -0.56
HXT12	YIL170W	LPD1	P09624	499 aa	Known RBP	11.57	□□□□□ -0.56
HXT12	YIL170W	HEF3	P53978	1044 aa	Known RBP	11.56	□□□□□ -0.56
HXT12	YIL170W	LYS2	P07702	1392 aa		11.55	□□□□□ -0.56
HXT12	YIL170W	SUI2	P20459	304 aa	Known RBP	11.54	□□□□□ -0.56
HXT12	YIL170W	SSA1	P10591	642 aa	Known RBP	11.54	□□□□□ -0.56
HXT12	YIL170W	CWH41	P53008	833 aa		11.53	□□□□□ -0.56
HXT12	YIL170W	SRT1	Q03175	343 aa		11.53	□□□□□ -0.56
HXT12	YIL170W	YOL057W	Q08225	711 aa		11.53	□□□□□ -0.56
HXT12	YIL170W	RPP0	P05317	312 aa	Known RBP	11.52	□□□□□ -0.57
HXT12	YIL170W	ARG8	P18544	423 aa		11.52	□□□□□ -0.57
HXT12	YIL170W	VPS27	P40343	622 aa	Known RBP	11.52	□□□□□ -0.57
HXT12	YIL170W	RAT1	Q02792	1006 aa	Known RBP	11.52	□□□□□ -0.57
HXT12	YIL170W	DCD1	P06773	312 aa		11.51	□□□□□ -0.57
HXT12	YIL170W	PKH1	Q03407	766 aa		11.51	□□□□□ -0.57
HXT12	YIL170W	CTT1	P06115	562 aa		11.5	□□□□□ -0.57
HXT12	YIL170W	YER156C	P40093	338 aa	Known RBP	11.5	□□□□□ -0.57
HXT12	YIL170W	YPR204W	Q08995	1032 aa		11.5	□□□□□ -0.57
HXT12	YIL170W	YKL222C	P35995	705 aa		11.49	□□□□□ -0.57
HXT12	YIL170W	IRC3	Q06683	689 aa		11.49	□□□□□ -0.57
HXT12	YIL170W	BDF2	Q07442	638 aa		11.48	□□□□□ -0.57
HXT12	YIL170W	CDC45	Q08032	650 aa		11.48	□□□□□ -0.57
HXT12	YIL170W	CAF20	P12962	161 aa	Known RBP	11.47	□□□□□ -0.57
HXT12	YIL170W	PMD1	P32634	1753 aa		11.47	□□□□□ -0.57
HXT12	YIL170W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	11.46	□□□□□ -0.57	not detected
HXT12	YIL170W	SMY1	P32364	656 aa	Known RBP	11.46	□□□□□ -0.57
HXT12	YIL170W	NUP133	P36161	1157 aa		11.46	□□□□□ -0.57
HXT12	YIL170W	ERT1	P38140	529 aa		11.46	□□□□□ -0.57
HXT12	YIL170W	DNM1	P54861	757 aa		11.46	□□□□□ -0.57
HXT12	YIL170W	MRP7	P12687	371 aa		11.45	□□□□□ -0.58
HXT12	YIL170W	KIN4	Q01919	800 aa		11.45	□□□□□ -0.58
HXT12	YIL170W	RVB2	Q12464	471 aa	Known RBP	11.45	□□□□□ -0.58
HXT12	YIL170W	PFF1	P38244	976 aa		11.44	□□□□□ -0.58
HXT12	YIL170W	NOP8	Q08287	484 aa	Predicted RBP	11.44	□□□□□ -0.58
HXT12	YIL170W	SWI1	P09547	1314 aa		11.44	□□□□□ -0.58
HXT12	YIL170W	CST6	P40535	587 aa		11.43	□□□□□ -0.58
HXT12	YIL170W	YGR122W	P53272	402 aa		11.43	□□□□□ -0.58
HXT12	YIL170W	FCP1	Q03254	732 aa		11.43	□□□□□ -0.58
HXT12	YIL170W	DIB1	Q06819	143 aa	Predicted RBP	11.43	□□□□□ -0.58
HXT12	YIL170W	SQS1	P53866	767 aa	Known RBP	11.42	□□□□□ -0.58
HXT12	YIL170W	YLR271W	Q06152	274 aa		11.42	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms