RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W SSA2P10592 639 aaKnown RBP6.59□□□□□ -1.36
MSH1YHR120W NST1P53935 1240 aa6.58□□□□□ -1.36
MSH1YHR120W INP54Q08227 384 aaKnown RBP6.57□□□□□ -1.36
MSH1YHR120W TRK1P12685 1235 aa6.56□□□□□ -1.36
MSH1YHR120W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
MSH1YHR120W ATG13Q06628 738 aa6.56□□□□□ -1.36
MSH1YHR120W OSM1P21375 501 aaKnown RBP6.55□□□□□ -1.36
MSH1YHR120W DSD1P53095 428 aa6.55□□□□□ -1.36
MSH1YHR120W MSB4Q12317 492 aa6.54□□□□□ -1.36
MSH1YHR120W NUP145P49687 1317 aa6.53□□□□□ -1.36
MSH1YHR120W PRS1P32895 427 aaKnown RBP6.53□□□□□ -1.36
MSH1YHR120W BDF1P35817 686 aa6.53□□□□□ -1.36
MSH1YHR120W PAP2P53632 584 aaKnown RBP6.53□□□□□ -1.36
MSH1YHR120W HSP104P31539 908 aaKnown RBP6.53□□□□□ -1.36
MSH1YHR120W AKL1P38080 1108 aaKnown RBP6.52□□□□□ -1.37
MSH1YHR120W GRX1P25373 110 aaKnown RBP6.51□□□□□ -1.37
MSH1YHR120W PSD2P53037 1138 aaKnown RBP6.51□□□□□ -1.37
MSH1YHR120W CTF4Q01454 927 aa6.51□□□□□ -1.37
MSH1YHR120W RAD4P14736 754 aa6.51□□□□□ -1.37
MSH1YHR120W GRE2Q12068 342 aaKnown RBP6.51□□□□□ -1.37
MSH1YHR120W YBP2P53169 641 aa6.5□□□□□ -1.37
MSH1YHR120W RRP46P53256 223 aaPredicted RBP6.5□□□□□ -1.37
MSH1YHR120W ALD3P54114 506 aa6.5□□□□□ -1.37
MSH1YHR120W BUG1Q12191 341 aa6.5□□□□□ -1.37
MSH1YHR120W TUM1Q08686 304 aaKnown RBP6.48□□□□□ -1.37
MSH1YHR120W MRPL32P25348 183 aa6.48□□□□□ -1.37
MSH1YHR120W AOS1Q06624 347 aa6.48□□□□□ -1.37
MSH1YHR120W NTH2P35172 780 aa6.47□□□□□ -1.37
MSH1YHR120W TOS1P38288 455 aa6.47□□□□□ -1.37
MSH1YHR120W UTP22P53254 1237 aaPredicted RBP6.47□□□□□ -1.37
MSH1YHR120W TFA1P36100 482 aa6.46□□□□□ -1.38
MSH1YHR120W SSA1P10591 642 aaKnown RBP6.46□□□□□ -1.38
MSH1YHR120W KCC4P25389 1037 aa6.45□□□□□ -1.38
MSH1YHR120W RMT2Q03305 412 aa6.45□□□□□ -1.38
MSH1YHR120W ALE1Q08548 619 aa6.44□□□□□ -1.38
MSH1YHR120W UTP10P42945 1769 aaKnown RBP6.43□□□□□ -1.38
MSH1YHR120W YGL015CP33199 130 aa6.43□□□□□ -1.38
MSH1YHR120W EAF6P47128 113 aa6.43□□□□□ -1.38
MSH1YHR120W IOC4Q04213 475 aa6.43□□□□□ -1.38
MSH1YHR120W NYV1Q12255 253 aa6.43□□□□□ -1.38
MSH1YHR120W RTR1P40084 226 aaPredicted RBP6.43□□□□□ -1.38
MSH1YHR120W HPC2Q01448 625 aa6.43□□□□□ -1.38
MSH1YHR120W RIX7Q07844 837 aaKnown RBP6.43□□□□□ -1.38
MSH1YHR120W YNL050CP53952 270 aa6.42□□□□□ -1.38
MSH1YHR120W NOP53Q12080 455 aaKnown RBP6.42□□□□□ -1.38
MSH1YHR120W PRD1P25375 712 aa6.42□□□□□ -1.38
MSH1YHR120W SAP155P43612 1002 aa6.42□□□□□ -1.38
MSH1YHR120W UGA3P26370 528 aa6.41□□□□□ -1.38
MSH1YHR120W TEA1P47988 759 aa6.41□□□□□ -1.38
MSH1YHR120W BUD27P43573 796 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
MSH1YHR120W MSN5P52918 1224 aa6.4□□□□□ -1.38
MSH1YHR120W MDG1P53885 366 aa6.4□□□□□ -1.38
MSH1YHR120W PHM7Q12252 991 aa6.4□□□□□ -1.38
MSH1YHR120W NSE3Q05541 303 aa6.39□□□□□ -1.39
MSH1YHR120W LYS2P07702 1392 aa6.39□□□□□ -1.39
MSH1YHR120W THI22Q06490 572 aa6.39□□□□□ -1.39
MSH1YHR120W CTI6Q08923 506 aa6.39□□□□□ -1.39
MSH1YHR120W SSP2Q08646 371 aa6.38□□□□□ -1.39
MSH1YHR120W SER1P33330 395 aaKnown RBP6.38□□□□□ -1.39
MSH1YHR120W ERT1P38140 529 aa6.38□□□□□ -1.39
MSH1YHR120W YFR016CP43597 1233 aaKnown RBP6.38□□□□□ -1.39
MSH1YHR120W MPP10P47083 593 aaKnown RBP6.38□□□□□ -1.39
MSH1YHR120W RPP0P05317 312 aaKnown RBP6.37□□□□□ -1.39
MSH1YHR120W CTT1P06115 562 aa6.37□□□□□ -1.39
MSH1YHR120W RRT14P40470 206 aa6.37□□□□□ -1.39
MSH1YHR120W ZDS1P50111 915 aaKnown RBP6.37□□□□□ -1.39
MSH1YHR120W YGL082WP53155 381 aa6.37□□□□□ -1.39
MSH1YHR120W KIN4Q01919 800 aa6.37□□□□□ -1.39
MSH1YHR120W LPD1P09624 499 aaKnown RBP6.36□□□□□ -1.39
MSH1YHR120W ARG8P18544 423 aa6.36□□□□□ -1.39
MSH1YHR120W YKL222CP35995 705 aa6.36□□□□□ -1.39
MSH1YHR120W MAM1P40065 302 aa6.36□□□□□ -1.39
MSH1YHR120W RTT109Q07794 436 aa6.36□□□□□ -1.39
MSH1YHR120W COQ4O13525 335 aa6.36□□□□□ -1.39
MSH1YHR120W YER156CP40093 338 aaKnown RBP6.36□□□□□ -1.39
MSH1YHR120W CWH41P53008 833 aa6.36□□□□□ -1.39
MSH1YHR120W YDL144CQ07589 356 aa6.35□□□□□ -1.39
MSH1YHR120W BMS1Q08965 1183 aaKnown RBP6.35□□□□□ -1.39
MSH1YHR120W DCD1P06773 312 aa6.35□□□□□ -1.39
MSH1YHR120W PFF1P38244 976 aa6.35□□□□□ -1.39
MSH1YHR120W RAT1Q02792 1006 aaKnown RBP6.35□□□□□ -1.39
MSH1YHR120W APL2P36000 726 aaPredicted RBP6.34□□□□□ -1.39
MSH1YHR120W HEF3P53978 1044 aaKnown RBP6.34□□□□□ -1.39
MSH1YHR120W ZDS2P54786 942 aa6.34□□□□□ -1.39
MSH1YHR120W YPR204WQ08995 1032 aa6.34□□□□□ -1.39
MSH1YHR120W YBR287WP38355 427 aa6.33□□□□□ -1.4
MSH1YHR120W GYP7P48365 746 aa6.33□□□□□ -1.4
MSH1YHR120W SMY1P32364 656 aaKnown RBP6.33□□□□□ -1.4
MSH1YHR120W PMD1P32634 1753 aa6.32□□□□□ -1.4
MSH1YHR120W TPD3P31383 635 aa6.32□□□□□ -1.4
MSH1YHR120W VPS64Q03944 604 aa6.32□□□□□ -1.4
MSH1YHR120W BDF2Q07442 638 aa6.32□□□□□ -1.4
MSH1YHR120W YOL057WQ08225 711 aa6.32□□□□□ -1.4
MSH1YHR120W DIB1Q06819 143 aaPredicted RBP6.31□□□□□ -1.4
MSH1YHR120W CDC45Q08032 650 aa6.31□□□□□ -1.4
MSH1YHR120W ERO1Q03103 563 aa6.31□□□□□ -1.4
MSH1YHR120W SQS1P53866 767 aaKnown RBP6.3□□□□□ -1.4
MSH1YHR120W IRC3Q06683 689 aa6.3□□□□□ -1.4
MSH1YHR120W SSK22P25390 1331 aaPredicted RBP6.3□□□□□ -1.4
MSH1YHR120W CAF20P12962 161 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms