RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C ROM2P51862 1356 aaKnown RBP6.7□□□□□ -1.34
SFB3YHR098C MET5P47169 1442 aa6.7□□□□□ -1.34
SFB3YHR098C SPT2P06843 333 aaPredicted RBP6.69□□□□□ -1.34
SFB3YHR098C PRI1P10363 409 aa6.69□□□□□ -1.34
SFB3YHR098C PKC1P24583 1151 aa6.69□□□□□ -1.34
SFB3YHR098C CLB1P24868 471 aa6.69□□□□□ -1.34
SFB3YHR098C TCD1P38756 429 aa6.69□□□□□ -1.34
SFB3YHR098C VPS60Q03390 229 aa6.69□□□□□ -1.34
SFB3YHR098C MLP1Q02455 1875 aaKnown RBP6.69□□□□□ -1.34
SFB3YHR098C YEF3P16521 1044 aaKnown RBP6.69□□□□□ -1.34
SFB3YHR098C REB1P21538 810 aa6.69□□□□□ -1.34
SFB3YHR098C DOS2P54858 310 aa6.69□□□□□ -1.34
SFB3YHR098C COG8Q04632 607 aa6.69□□□□□ -1.34
SFB3YHR098C UTP13Q05946 817 aaKnown RBP6.69□□□□□ -1.34
SFB3YHR098C NOP14Q99207 810 aaKnown RBP6.69□□□□□ -1.34
SFB3YHR098C RPO21P04050 1733 aaKnown RBP6.69□□□□□ -1.34
SFB3YHR098C PBS2P08018 668 aa6.68□□□□□ -1.34
SFB3YHR098C DEP1P31385 405 aa6.68□□□□□ -1.34
SFB3YHR098C SAP155P43612 1002 aa6.68□□□□□ -1.34
SFB3YHR098C RSM7P47150 247 aa6.68□□□□□ -1.34
SFB3YHR098C YGL081WP53156 320 aa6.68□□□□□ -1.34
SFB3YHR098C MIC60P36112 540 aa6.66□□□□□ -1.34
SFB3YHR098C PRP3Q03338 469 aaPredicted RBP6.66□□□□□ -1.34
SFB3YHR098C PUF6Q04373 656 aaKnown RBP6.66□□□□□ -1.34
SFB3YHR098C SFI1Q12369 946 aa6.66□□□□□ -1.34
SFB3YHR098C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
SFB3YHR098C TFB3Q03290 321 aa6.66□□□□□ -1.34
SFB3YHR098C RTC1Q08281 1341 aa6.65□□□□□ -1.34
SFB3YHR098C RVS167P39743 482 aaKnown RBP6.65□□□□□ -1.34
SFB3YHR098C RRT14P40470 206 aa6.65□□□□□ -1.34
SFB3YHR098C MSH4P40965 878 aaPredicted RBP6.65□□□□□ -1.34
SFB3YHR098C CIR1P42940 261 aa6.65□□□□□ -1.34
SFB3YHR098C RRN6P32786 894 aa6.65□□□□□ -1.35
SFB3YHR098C HPC2Q01448 625 aa6.65□□□□□ -1.35
SFB3YHR098C RAV1P47104 1357 aa6.65□□□□□ -1.35
SFB3YHR098C RPN12P32496 274 aa6.64□□□□□ -1.35
SFB3YHR098C YNL011CP53980 444 aa6.64□□□□□ -1.35
SFB3YHR098C NOB1Q08444 459 aaKnown RBP6.64□□□□□ -1.35
SFB3YHR098C PDR11P40550 1411 aa6.64□□□□□ -1.35
SFB3YHR098C CDC25P04821 1589 aa6.64□□□□□ -1.35
SFB3YHR098C NTE1Q04958 1679 aa6.64□□□□□ -1.35
SFB3YHR098C NPA3P47122 385 aa6.64□□□□□ -1.35
SFB3YHR098C RRP46P53256 223 aaPredicted RBP6.64□□□□□ -1.35
SFB3YHR098C RNT1Q02555 471 aa6.64□□□□□ -1.35
SFB3YHR098C DRS2P39524 1355 aa6.64□□□□□ -1.35
SFB3YHR098C RAD9P14737 1309 aa6.64□□□□□ -1.35
SFB3YHR098C TPD3P31383 635 aa6.63□□□□□ -1.35
SFB3YHR098C BUD27P43573 796 aaKnown RBP RIP-Chip data6.63□□□□□ -1.35not detected
SFB3YHR098C VPS4P52917 437 aa6.63□□□□□ -1.35
SFB3YHR098C PSH1Q12161 406 aa6.63□□□□□ -1.35
SFB3YHR098C PSK1P31374 1356 aa6.63□□□□□ -1.35
SFB3YHR098C NUP145P49687 1317 aa6.63□□□□□ -1.35
SFB3YHR098C NUP192P47054 1683 aa6.63□□□□□ -1.35
SFB3YHR098C STU2P46675 888 aa6.63□□□□□ -1.35
SFB3YHR098C RPN7Q06103 429 aaKnown RBP6.63□□□□□ -1.35
SFB3YHR098C CYC8P14922 966 aa6.62□□□□□ -1.35
SFB3YHR098C MFT1P33441 392 aaKnown RBP6.62□□□□□ -1.35
SFB3YHR098C BYE1P36106 594 aa6.62□□□□□ -1.35
SFB3YHR098C YGL140CP53120 1219 aa6.62□□□□□ -1.35
SFB3YHR098C ESL2P36168 1195 aa6.62□□□□□ -1.35
SFB3YHR098C RTR1P40084 226 aaPredicted RBP6.62□□□□□ -1.35
SFB3YHR098C KRE33P53914 1056 aaKnown RBP6.62□□□□□ -1.35
SFB3YHR098C CHC1P22137 1653 aaKnown RBP6.61□□□□□ -1.35
SFB3YHR098C BDH2P39713 417 aa6.61□□□□□ -1.35
SFB3YHR098C CHZ1P40019 153 aaPredicted RBP6.61□□□□□ -1.35
SFB3YHR098C YMR102CQ03177 834 aa6.61□□□□□ -1.35
SFB3YHR098C YOL087CQ99247 1116 aa6.61□□□□□ -1.35
SFB3YHR098C SPE2P21182 396 aa6.61□□□□□ -1.35
SFB3YHR098C RRP15Q06511 250 aaPredicted RBP6.61□□□□□ -1.35
SFB3YHR098C ETT1Q08421 412 aaKnown RBP6.61□□□□□ -1.35
SFB3YHR098C YSP2Q06681 1438 aa6.61□□□□□ -1.35
SFB3YHR098C DLD1P32891 587 aa6.6□□□□□ -1.35
SFB3YHR098C MNR2P35724 969 aa6.6□□□□□ -1.35
SFB3YHR098C BRL1P38770 471 aa6.6□□□□□ -1.35
SFB3YHR098C TIM50Q02776 476 aa6.6□□□□□ -1.35
SFB3YHR098C CSE4P36012 229 aa6.6□□□□□ -1.35
SFB3YHR098C PBY1P38254 753 aa6.6□□□□□ -1.35
SFB3YHR098C ATG32P40458 529 aa6.6□□□□□ -1.35
SFB3YHR098C SML1Q04964 104 aa6.6□□□□□ -1.35
SFB3YHR098C KRE5P22023 1365 aa6.6□□□□□ -1.35
SFB3YHR098C SSF1P38789 453 aaPredicted RBP6.59□□□□□ -1.35
SFB3YHR098C CEP3P40969 608 aa6.59□□□□□ -1.35
SFB3YHR098C MRS2Q01926 470 aa6.59□□□□□ -1.35
SFB3YHR098C VPS20Q04272 221 aa6.59□□□□□ -1.35
SFB3YHR098C THI22Q06490 572 aa6.59□□□□□ -1.35
SFB3YHR098C SSL2Q00578 843 aa6.59□□□□□ -1.35
SFB3YHR098C IML1P47170 1584 aa6.59□□□□□ -1.35
SFB3YHR098C DID4P36108 232 aa6.58□□□□□ -1.36
SFB3YHR098C GDT1P38301 280 aaPredicted RBP6.58□□□□□ -1.36
SFB3YHR098C HEF3P53978 1044 aaKnown RBP6.58□□□□□ -1.36
SFB3YHR098C APC11Q12157 165 aa6.58□□□□□ -1.36
SFB3YHR098C PSE1P32337 1089 aaKnown RBP6.58□□□□□ -1.36
SFB3YHR098C FKH1P40466 484 aa6.58□□□□□ -1.36
SFB3YHR098C PAP2P53632 584 aaKnown RBP6.58□□□□□ -1.36
SFB3YHR098C HST1P53685 503 aa6.58□□□□□ -1.36
SFB3YHR098C UBP10P53874 792 aaPredicted RBP6.58□□□□□ -1.36
SFB3YHR098C ECM16Q04217 1267 aaKnown RBP6.58□□□□□ -1.36
SFB3YHR098C SAP190P36123 1033 aa6.57□□□□□ -1.36
SFB3YHR098C ILV3P39522 585 aaKnown RBP6.57□□□□□ -1.36
SFB3YHR098C HRQ1Q05549 1077 aa6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms