RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PBP1	YGR178C	ALD4	P46367	519 aa	Known RBP	11.78	□□□□□ -0.52
PBP1	YGR178C	YRF1-4	O13559	1382 aa		11.77	□□□□□ -0.52
PBP1	YGR178C	RAD50	P12753	1312 aa		11.77	□□□□□ -0.52
PBP1	YGR178C	RNA1	P11745	407 aa	Known RBP	11.77	□□□□□ -0.53
PBP1	YGR178C	BDH2	P39713	417 aa		11.77	□□□□□ -0.53
PBP1	YGR178C	BCK1	Q01389	1478 aa		11.77	□□□□□ -0.53
PBP1	YGR178C	ECM16	Q04217	1267 aa	Known RBP	11.77	□□□□□ -0.53
PBP1	YGR178C	VPS20	Q04272	221 aa		11.77	□□□□□ -0.53
PBP1	YGR178C	BRN1	P38170	754 aa		11.76	□□□□□ -0.53
PBP1	YGR178C	HIM1	Q06674	414 aa		11.76	□□□□□ -0.53
PBP1	YGR178C	CLB5	P30283	435 aa		11.75	□□□□□ -0.53
PBP1	YGR178C	GCR2	Q01722	534 aa		11.75	□□□□□ -0.53
PBP1	YGR178C	TCD1	P38756	429 aa		11.75	□□□□□ -0.53
PBP1	YGR178C	LTV1	P34078	463 aa		11.74	□□□□□ -0.53
PBP1	YGR178C	RFC1	P38630	861 aa	Known RBP	11.74	□□□□□ -0.53
PBP1	YGR178C	HST1	P53685	503 aa		11.74	□□□□□ -0.53
PBP1	YGR178C	CAB1	Q04430	367 aa		11.72	□□□□□ -0.53
PBP1	YGR178C	TYS1	P36421	394 aa	Known RBP	11.72	□□□□□ -0.53
PBP1	YGR178C	HXT13	P39924	564 aa		11.72	□□□□□ -0.53
PBP1	YGR178C	RSM25	P40496	264 aa		11.72	□□□□□ -0.53
PBP1	YGR178C	KRE33	P53914	1056 aa	Known RBP	11.72	□□□□□ -0.53
PBP1	YGR178C	HRQ1	Q05549	1077 aa		11.71	□□□□□ -0.53
PBP1	YGR178C	APC11	Q12157	165 aa		11.71	□□□□□ -0.53
PBP1	YGR178C	CYC8	P14922	966 aa		11.71	□□□□□ -0.54
PBP1	YGR178C	CIN4	P39110	191 aa		11.71	□□□□□ -0.54
PBP1	YGR178C	SFI1	Q12369	946 aa		11.71	□□□□□ -0.54
PBP1	YGR178C	FPR4	Q06205	392 aa	Predicted RBP	11.7	□□□□□ -0.54
PBP1	YGR178C	SPB4	P25808	606 aa	Predicted RBP	11.69	□□□□□ -0.54
PBP1	YGR178C	DID4	P36108	232 aa		11.69	□□□□□ -0.54
PBP1	YGR178C	BIK1	P11709	440 aa		11.69	□□□□□ -0.54
PBP1	YGR178C	MFT1	P33441	392 aa	Known RBP	11.69	□□□□□ -0.54
PBP1	YGR178C	STU2	P46675	888 aa		11.69	□□□□□ -0.54
PBP1	YGR178C	HXT17	P53631	564 aa		11.69	□□□□□ -0.54
PBP1	YGR178C	KEX1	P09620	729 aa		11.68	□□□□□ -0.54
PBP1	YGR178C	SPO1	P53541	631 aa		11.67	□□□□□ -0.54
PBP1	YGR178C	TIM50	Q02776	476 aa		11.67	□□□□□ -0.54
PBP1	YGR178C	VPS60	Q03390	229 aa		11.67	□□□□□ -0.54
PBP1	YGR178C	CWH41	P53008	833 aa		11.67	□□□□□ -0.54
PBP1	YGR178C	TAP42	Q04372	366 aa		11.67	□□□□□ -0.54
PBP1	YGR178C	UTP13	Q05946	817 aa	Known RBP	11.67	□□□□□ -0.54
PBP1	YGR178C	USO1	P25386	1790 aa		11.66	□□□□□ -0.54
PBP1	YGR178C	NMD2	P38798	1089 aa	Known RBP	11.66	□□□□□ -0.54
PBP1	YGR178C	SWE1	P32944	819 aa		11.65	□□□□□ -0.54
PBP1	YGR178C	YNG2	P38806	282 aa	Known RBP	11.65	□□□□□ -0.54
PBP1	YGR178C	NUG1	P40010	520 aa	Known RBP	11.65	□□□□□ -0.54
PBP1	YGR178C	NOP14	Q99207	810 aa	Known RBP	11.65	□□□□□ -0.54
PBP1	YGR178C	RNR2	P09938	399 aa	Known RBP	11.65	□□□□□ -0.54
PBP1	YGR178C	MRPL10	P36520	322 aa		11.65	□□□□□ -0.54
PBP1	YGR178C	RPS0B	P46654	252 aa	Known RBP	11.65	□□□□□ -0.54
PBP1	YGR178C	PDI1	P17967	522 aa	Known RBP	11.64	□□□□□ -0.55
PBP1	YGR178C	SSL2	Q00578	843 aa		11.64	□□□□□ -0.55
PBP1	YGR178C	AUS1	Q08409	1394 aa		11.64	□□□□□ -0.55
PBP1	YGR178C	CLB1	P24868	471 aa		11.64	□□□□□ -0.55
PBP1	YGR178C	MNR2	P35724	969 aa		11.64	□□□□□ -0.55
PBP1	YGR178C	PBY1	P38254	753 aa		11.64	□□□□□ -0.55
PBP1	YGR178C	KRI1	P42846	591 aa	Known RBP	11.64	□□□□□ -0.55
PBP1	YGR178C	ENV11	P53246	860 aa		11.64	□□□□□ -0.55
PBP1	YGR178C	DEP1	P31385	405 aa		11.63	□□□□□ -0.55
PBP1	YGR178C	RIX1	P38883	763 aa	Predicted RBP	11.62	□□□□□ -0.55
PBP1	YGR178C	CSI1	Q04368	295 aa		11.62	□□□□□ -0.55
PBP1	YGR178C	TRL1	P09880	827 aa	Known RBP	11.61	□□□□□ -0.55
PBP1	YGR178C	DSN1	P40568	576 aa		11.61	□□□□□ -0.55
PBP1	YGR178C	HYR1	P40581	163 aa	Known RBP	11.61	□□□□□ -0.55
PBP1	YGR178C	CEP3	P40969	608 aa		11.61	□□□□□ -0.55
PBP1	YGR178C	DUR1,2	P32528	1835 aa	Known RBP	11.6	□□□□□ -0.55
PBP1	YGR178C	LYS2	P07702	1392 aa		11.59	□□□□□ -0.55
PBP1	YGR178C	SES1	P07284	462 aa	Known RBP	11.59	□□□□□ -0.55
PBP1	YGR178C	MPE1	P35728	441 aa	Known RBP	11.59	□□□□□ -0.55
PBP1	YGR178C	IPL1	P38991	367 aa		11.59	□□□□□ -0.55
PBP1	YGR178C	MRX12	P47084	519 aa		11.59	□□□□□ -0.55
PBP1	YGR178C	RCM1	P53972	490 aa		11.59	□□□□□ -0.55
PBP1	YGR178C	MED8	P38304	223 aa		11.58	□□□□□ -0.56
PBP1	YGR178C	VAS1	P07806	1104 aa	Known RBP	11.58	□□□□□ -0.56
PBP1	YGR178C	ECM1	P39715	212 aa		11.58	□□□□□ -0.56
PBP1	YGR178C	GYP7	P48365	746 aa		11.58	□□□□□ -0.56
PBP1	YGR178C	YBR287W	P38355	427 aa		11.57	□□□□□ -0.56
PBP1	YGR178C	SRT1	Q03175	343 aa		11.57	□□□□□ -0.56
PBP1	YGR178C	PPH3	P32345	308 aa		11.57	□□□□□ -0.56
PBP1	YGR178C	PEX19	Q07418	342 aa		11.57	□□□□□ -0.56
PBP1	YGR178C	SPC110	P32380	944 aa		11.56	□□□□□ -0.56
PBP1	YGR178C	DSD1	P53095	428 aa		11.56	□□□□□ -0.56
PBP1	YGR178C	GRX4	P32642	244 aa		11.55	□□□□□ -0.56
PBP1	YGR178C	RTF1	P53064	558 aa		11.55	□□□□□ -0.56
PBP1	YGR178C	RNT1	Q02555	471 aa		11.55	□□□□□ -0.56
PBP1	YGR178C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.54	□□□□□ -0.56	not detected
PBP1	YGR178C	TRS33	Q99394	268 aa		11.54	□□□□□ -0.56
PBP1	YGR178C	CCT5	P40413	562 aa	Known RBP	11.52	□□□□□ -0.56
PBP1	YGR178C	BMS1	Q08965	1183 aa	Known RBP	11.52	□□□□□ -0.56
PBP1	YGR178C	CDC16	P09798	840 aa		11.52	□□□□□ -0.57
PBP1	YGR178C	PRP31	P49704	494 aa	Predicted RBP	11.52	□□□□□ -0.57
PBP1	YGR178C	YGL140C	P53120	1219 aa		11.52	□□□□□ -0.57
PBP1	YGR178C	MSB4	Q12317	492 aa		11.52	□□□□□ -0.57
PBP1	YGR178C	LEU2	P04173	364 aa	Predicted RBP	11.51	□□□□□ -0.57
PBP1	YGR178C	TAF13	P11747	167 aa		11.51	□□□□□ -0.57
PBP1	YGR178C	NPR3	P38742	1146 aa		11.51	□□□□□ -0.57
PBP1	YGR178C	GAS4	Q08271	471 aa		11.51	□□□□□ -0.57
PBP1	YGR178C	ZDS1	P50111	915 aa	Known RBP	11.51	□□□□□ -0.57
PBP1	YGR178C	RPS19A	P07280	144 aa	Known RBP	11.5	□□□□□ -0.57
PBP1	YGR178C	RPS19B	P07281	144 aa	Predicted RBP	11.5	□□□□□ -0.57
PBP1	YGR178C	FRS2	P15625	503 aa	Known RBP	11.5	□□□□□ -0.57

Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms