RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeastyeast

Gene PEX4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX4YGR133W DIT2P21595 489 aa6.17□□□□□ -1.42
PEX4YGR133W LSB3P43603 459 aaKnown RBP6.17□□□□□ -1.42
PEX4YGR133W YJR098CP47139 656 aa6.16□□□□□ -1.42
PEX4YGR133W PUS1Q12211 544 aaKnown RBP6.16□□□□□ -1.42
PEX4YGR133W TCB1Q12466 1186 aa6.16□□□□□ -1.42
PEX4YGR133W ROG3P43602 733 aa6.15□□□□□ -1.42
PEX4YGR133W ITT1Q04638 464 aa6.15□□□□□ -1.42
PEX4YGR133W YBL086CP38177 466 aa6.14□□□□□ -1.43
PEX4YGR133W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
PEX4YGR133W TY1A-MR1Q04215 440 aa6.13□□□□□ -1.43
PEX4YGR133W VAC17P25591 423 aa6.12□□□□□ -1.43
PEX4YGR133W MDJ1P35191 511 aa6.12□□□□□ -1.43
PEX4YGR133W OSH7P38755 437 aa6.12□□□□□ -1.43
PEX4YGR133W APP1P53933 587 aa6.12□□□□□ -1.43
PEX4YGR133W DPH6Q12429 685 aa6.12□□□□□ -1.43
PEX4YGR133W CCP1P00431 361 aa6.11□□□□□ -1.43
PEX4YGR133W HST2P53686 357 aa6.11□□□□□ -1.43
PEX4YGR133W MMP1Q12372 583 aa6.1□□□□□ -1.43
PEX4YGR133W PHM7Q12252 991 aa6.08□□□□□ -1.44
PEX4YGR133W ESS1P22696 170 aa6.07□□□□□ -1.44
PEX4YGR133W EMW1P42842 904 aaKnown RBP6.05□□□□□ -1.44
PEX4YGR133W LYS5P50113 272 aa6.05□□□□□ -1.44
PEX4YGR133W SPB4P25808 606 aaPredicted RBP6.04□□□□□ -1.44
PEX4YGR133W YJU3P28321 313 aa6.04□□□□□ -1.44
PEX4YGR133W GLN1P32288 370 aaKnown RBP6.04□□□□□ -1.44
PEX4YGR133W JJJ3P47138 172 aa6.03□□□□□ -1.44
PEX4YGR133W NSG2P53898 299 aa6.03□□□□□ -1.44
PEX4YGR133W NAM8Q00539 523 aaKnown RBP6.02□□□□□ -1.45
PEX4YGR133W NRD1P53617 575 aaKnown RBP RIP-Chip data6.01□□□□□ -1.45not detected
PEX4YGR133W DFG5Q05031 458 aa6.01□□□□□ -1.45
PEX4YGR133W MKS1P34072 584 aa5.99□□□□□ -1.45
PEX4YGR133W THI72Q08579 599 aa5.99□□□□□ -1.45
PEX4YGR133W CDC19P00549 500 aaKnown RBP5.98□□□□□ -1.45
PEX4YGR133W RSC30P38781 883 aa5.98□□□□□ -1.45
PEX4YGR133W SAS10Q12136 610 aaPredicted RBP5.98□□□□□ -1.45
PEX4YGR133W YFL066CP43538 392 aa5.96□□□□□ -1.46
PEX4YGR133W FIG4P42837 879 aa5.95□□□□□ -1.46
PEX4YGR133W CCT8P47079 568 aaKnown RBP5.95□□□□□ -1.46
PEX4YGR133W ATF2P53296 535 aa5.94□□□□□ -1.46
PEX4YGR133W BDS1Q08347 646 aa5.94□□□□□ -1.46
PEX4YGR133W AI1P03875 834 aa5.93□□□□□ -1.46
PEX4YGR133W PKH3Q03306 898 aaPredicted RBP5.93□□□□□ -1.46
PEX4YGR133W CUZ1P53899 274 aa5.92□□□□□ -1.46
PEX4YGR133W ARG8P18544 423 aa5.9□□□□□ -1.46
PEX4YGR133W KTR1P27810 393 aaKnown RBP5.9□□□□□ -1.46
PEX4YGR133W FBP26P32604 452 aa5.89□□□□□ -1.47
PEX4YGR133W CEM1P39525 442 aa5.88□□□□□ -1.47
PEX4YGR133W STE6P12866 1290 aa5.87□□□□□ -1.47
PEX4YGR133W VTC4P47075 721 aa5.87□□□□□ -1.47
PEX4YGR133W YPR053CQ6Q5F3 151 aa5.87□□□□□ -1.47
PEX4YGR133W SBP1P10080 294 aaKnown RBP5.85□□□□□ -1.47
PEX4YGR133W GLC3P32775 704 aa5.85□□□□□ -1.47
PEX4YGR133W TEC1P18412 486 aa5.84□□□□□ -1.47
PEX4YGR133W SBE2P42223 864 aaKnown RBP5.84□□□□□ -1.47
PEX4YGR133W YPR084WQ06821 456 aa5.84□□□□□ -1.47
PEX4YGR133W DAL1P32375 460 aa5.82□□□□□ -1.48
PEX4YGR133W TDA6Q06466 467 aa5.82□□□□□ -1.48
PEX4YGR133W ADE12P80210 433 aaKnown RBP5.81□□□□□ -1.48
PEX4YGR133W YMR265CQ03508 461 aaKnown RBP5.81□□□□□ -1.48
PEX4YGR133W ISU1Q03020 165 aa5.8□□□□□ -1.48
PEX4YGR133W SYT1Q06836 1226 aa5.8□□□□□ -1.48
PEX4YGR133W SKN7P38889 622 aa5.79□□□□□ -1.48
PEX4YGR133W DIT1P21623 536 aa5.78□□□□□ -1.48
PEX4YGR133W YMR187CQ03236 431 aa5.78□□□□□ -1.48
PEX4YGR133W RAD59Q12223 238 aa5.78□□□□□ -1.48
PEX4YGR133W DMA1P38823 416 aa5.77□□□□□ -1.49
PEX4YGR133W DLD3P39976 496 aaKnown RBP5.77□□□□□ -1.49
PEX4YGR133W YNR021WP53723 404 aaKnown RBP5.77□□□□□ -1.49
PEX4YGR133W KRE33P53914 1056 aaKnown RBP5.77□□□□□ -1.49
PEX4YGR133W ATG20Q07528 640 aa5.77□□□□□ -1.49
PEX4YGR133W UBP15P50101 1230 aa5.76□□□□□ -1.49
PEX4YGR133W GLT1Q12680 2145 aaKnown RBP5.75□□□□□ -1.49
PEX4YGR133W CSN12P47130 423 aa5.75□□□□□ -1.49
PEX4YGR133W GUT2P32191 649 aa5.74□□□□□ -1.49
PEX4YGR133W TY1A-DR3Q12441 440 aa5.74□□□□□ -1.49
PEX4YGR133W SLA1P32790 1244 aa5.73□□□□□ -1.49
PEX4YGR133W YNR014WP53719 212 aa5.73□□□□□ -1.49
PEX4YGR133W YDR461C-AQ2V2P7 80 aa5.73□□□□□ -1.49
PEX4YGR133W SSN3P39073 555 aa5.72□□□□□ -1.49
PEX4YGR133W YCK2P23292 546 aaKnown RBP5.7□□□□□ -1.5
PEX4YGR133W MSN5P52918 1224 aa5.7□□□□□ -1.5
PEX4YGR133W WTM2Q12206 467 aa5.7□□□□□ -1.5
PEX4YGR133W RPP2BP02400 110 aaKnown RBP5.69□□□□□ -1.5
PEX4YGR133W MCX1P38323 520 aaPredicted RBP5.69□□□□□ -1.5
PEX4YGR133W MAK16P10962 306 aaPredicted RBP5.67□□□□□ -1.5
PEX4YGR133W SLN1P39928 1220 aaPredicted RBP5.67□□□□□ -1.5
PEX4YGR133W STE20Q03497 939 aaKnown RBP5.67□□□□□ -1.5
PEX4YGR133W GPM1P00950 247 aaKnown RBP5.66□□□□□ -1.5
PEX4YGR133W AHP1P38013 176 aaKnown RBP5.66□□□□□ -1.5
PEX4YGR133W BOI2P39969 1040 aa5.66□□□□□ -1.5
PEX4YGR133W FRA1Q07825 749 aa5.66□□□□□ -1.5
PEX4YGR133W YDR215CQ12240 137 aa5.66□□□□□ -1.5
PEX4YGR133W DAT1P13483 248 aaKnown RBP5.65□□□□□ -1.5
PEX4YGR133W AMN1P38285 549 aaPredicted RBP5.65□□□□□ -1.5
PEX4YGR133W MCA1Q08601 432 aa5.65□□□□□ -1.5
PEX4YGR133W AIM7Q12156 149 aa5.65□□□□□ -1.5
PEX4YGR133W UTP7P40055 554 aaKnown RBP5.64□□□□□ -1.51
PEX4YGR133W ISR1Q06098 443 aaKnown RBP5.64□□□□□ -1.51
PEX4YGR133W FPS1P23900 669 aa5.62□□□□□ -1.51
PEX4YGR133W UTR2P32623 467 aa5.62□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 99.5 ms