RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W PUS6P53294 404 aa8.76□□□□□ -1.01
SNU71YGR013W HTA1P04911 132 aaKnown RBP8.75□□□□□ -1.01
SNU71YGR013W HTA2P04912 132 aa8.75□□□□□ -1.01
SNU71YGR013W QDR1P40475 563 aa8.75□□□□□ -1.01
SNU71YGR013W ACS2P52910 683 aaKnown RBP8.75□□□□□ -1.01
SNU71YGR013W MNL2Q12205 849 aa8.75□□□□□ -1.01
SNU71YGR013W ALD3P54114 506 aa8.74□□□□□ -1.01
SNU71YGR013W GLO3P38682 493 aaKnown RBP8.74□□□□□ -1.01
SNU71YGR013W ACF4P47129 309 aa8.74□□□□□ -1.01
SNU71YGR013W YOL036WQ08206 761 aa8.74□□□□□ -1.01
SNU71YGR013W FUR4P05316 633 aaKnown RBP8.73□□□□□ -1.01
SNU71YGR013W PPG1P32838 368 aa8.73□□□□□ -1.01
SNU71YGR013W TIF4632P39936 914 aaKnown RBP8.73□□□□□ -1.01
SNU71YGR013W FYV10P40492 516 aa8.73□□□□□ -1.01
SNU71YGR013W HAP4P14064 554 aa8.72□□□□□ -1.01
SNU71YGR013W IOC3P43596 787 aa8.72□□□□□ -1.01
SNU71YGR013W PUN1Q06991 263 aa8.72□□□□□ -1.01
SNU71YGR013W SRS2P12954 1174 aa8.72□□□□□ -1.01
SNU71YGR013W SRP40P32583 406 aaPredicted RBP8.71□□□□□ -1.01
SNU71YGR013W CIT2P08679 460 aa8.7□□□□□ -1.02
SNU71YGR013W ALD6P54115 500 aaKnown RBP8.7□□□□□ -1.02
SNU71YGR013W SET4P42948 560 aa8.7□□□□□ -1.02
SNU71YGR013W YRR1Q12172 810 aa8.7□□□□□ -1.02
SNU71YGR013W ERF2Q06551 359 aa8.69□□□□□ -1.02
SNU71YGR013W KEX2P13134 814 aa8.68□□□□□ -1.02
SNU71YGR013W RRP14P36080 434 aaKnown RBP8.68□□□□□ -1.02
SNU71YGR013W TGL3P40308 642 aa8.68□□□□□ -1.02
SNU71YGR013W UBX5Q06682 500 aa8.68□□□□□ -1.02
SNU71YGR013W SWE1P32944 819 aa8.68□□□□□ -1.02
SNU71YGR013W FRA1Q07825 749 aa8.68□□□□□ -1.02
SNU71YGR013W YKL091CP33324 310 aaKnown RBP8.67□□□□□ -1.02
SNU71YGR013W FPR3P38911 411 aaKnown RBP8.67□□□□□ -1.02
SNU71YGR013W ALG12P53730 551 aa8.67□□□□□ -1.02
SNU71YGR013W YEL023CP39992 682 aa8.66□□□□□ -1.02
SNU71YGR013W TBF1Q02457 562 aa8.66□□□□□ -1.02
SNU71YGR013W MCM2P29469 868 aa8.66□□□□□ -1.02
SNU71YGR013W TOM20P35180 183 aa8.66□□□□□ -1.02
SNU71YGR013W SOH1P38633 127 aa8.66□□□□□ -1.02
SNU71YGR013W VPS16Q03308 798 aa8.66□□□□□ -1.02
SNU71YGR013W STE20Q03497 939 aaKnown RBP8.66□□□□□ -1.02
SNU71YGR013W GAS4Q08271 471 aa8.66□□□□□ -1.02
SNU71YGR013W ATG3P40344 310 aa8.65□□□□□ -1.02
SNU71YGR013W APL6P46682 809 aa8.65□□□□□ -1.02
SNU71YGR013W SPR28Q04921 423 aa8.65□□□□□ -1.02
SNU71YGR013W TSR4P25040 408 aa8.64□□□□□ -1.03
SNU71YGR013W GTT3P39996 337 aa8.64□□□□□ -1.03
SNU71YGR013W YPR084WQ06821 456 aa8.64□□□□□ -1.03
SNU71YGR013W PIN2Q12057 282 aa8.64□□□□□ -1.03
SNU71YGR013W TSC13Q99190 310 aa8.64□□□□□ -1.03
SNU71YGR013W TEC1P18412 486 aa8.64□□□□□ -1.03
SNU71YGR013W YDL206WQ12424 762 aa8.64□□□□□ -1.03
SNU71YGR013W HSL1P34244 1518 aa8.63□□□□□ -1.03
SNU71YGR013W MIP1P15801 1254 aa8.63□□□□□ -1.03
SNU71YGR013W MAD1P40957 749 aa8.63□□□□□ -1.03
SNU71YGR013W TUB4P53378 473 aa8.63□□□□□ -1.03
SNU71YGR013W UTP13Q05946 817 aaKnown RBP8.63□□□□□ -1.03
SNU71YGR013W GPI13Q07830 1017 aa8.63□□□□□ -1.03
SNU71YGR013W PDI1P17967 522 aaKnown RBP8.62□□□□□ -1.03
SNU71YGR013W FIG4P42837 879 aa8.62□□□□□ -1.03
SNU71YGR013W OSW7P43611 510 aa8.62□□□□□ -1.03
SNU71YGR013W NSE3Q05541 303 aa8.62□□□□□ -1.03
SNU71YGR013W SSF2Q12153 453 aaPredicted RBP8.62□□□□□ -1.03
SNU71YGR013W LSO1Q3E827 93 aa8.62□□□□□ -1.03
SNU71YGR013W GUT2P32191 649 aa8.62□□□□□ -1.03
SNU71YGR013W SPT6P23615 1451 aaKnown RBP8.61□□□□□ -1.03
SNU71YGR013W MST1P07236 462 aa8.61□□□□□ -1.03
SNU71YGR013W VAN1P23642 535 aa8.61□□□□□ -1.03
SNU71YGR013W RPN4Q03465 531 aa8.61□□□□□ -1.03
SNU71YGR013W RPT1P33299 467 aaKnown RBP8.6□□□□□ -1.03
SNU71YGR013W TFG1P41895 735 aaPredicted RBP8.6□□□□□ -1.03
SNU71YGR013W PHO4P07270 312 aaKnown RBP8.6□□□□□ -1.03
SNU71YGR013W SUV3P32580 737 aa8.6□□□□□ -1.03
SNU71YGR013W BOI1P38041 980 aaKnown RBP8.6□□□□□ -1.03
SNU71YGR013W SUB1P54000 292 aaKnown RBP8.6□□□□□ -1.03
SNU71YGR013W DPL1Q05567 589 aa8.6□□□□□ -1.03
SNU71YGR013W BUD6P41697 788 aa8.59□□□□□ -1.03
SNU71YGR013W TRS120Q04183 1289 aa8.59□□□□□ -1.03
SNU71YGR013W URN1Q06525 465 aaKnown RBP8.59□□□□□ -1.03
SNU71YGR013W UBP3Q01477 912 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
SNU71YGR013W TRS33Q99394 268 aa8.58□□□□□ -1.04
SNU71YGR013W NUD1P32336 851 aa8.57□□□□□ -1.04
SNU71YGR013W YJL049WP47048 450 aa8.57□□□□□ -1.04
SNU71YGR013W WRS1Q12109 432 aaKnown RBP8.57□□□□□ -1.04
SNU71YGR013W STI1P15705 589 aaKnown RBP RIP-Chip data8.56□□□□□ -1.04not detected
SNU71YGR013W PTC4P38089 393 aa8.56□□□□□ -1.04
SNU71YGR013W DAK2P43550 591 aa8.56□□□□□ -1.04
SNU71YGR013W AGE1Q04412 482 aa8.56□□□□□ -1.04
SNU71YGR013W CLN2P20438 545 aa8.55□□□□□ -1.04
SNU71YGR013W PBP2P38151 413 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
SNU71YGR013W RPA14P50106 137 aa8.55□□□□□ -1.04
SNU71YGR013W RMD1Q03441 430 aa8.55□□□□□ -1.04
SNU71YGR013W MPC54Q08550 464 aa8.55□□□□□ -1.04
SNU71YGR013W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
SNU71YGR013W SPR3P41901 512 aa8.55□□□□□ -1.04
SNU71YGR013W POB3Q04636 552 aaKnown RBP8.55□□□□□ -1.04
SNU71YGR013W CDC53Q12018 815 aaKnown RBP8.55□□□□□ -1.04
SNU71YGR013W MSB4Q12317 492 aa8.54□□□□□ -1.04
SNU71YGR013W HAL5P38970 855 aaKnown RBP8.53□□□□□ -1.04
SNU71YGR013W SPT2P06843 333 aaPredicted RBP8.53□□□□□ -1.04
SNU71YGR013W SSB1P11484 613 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms