RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W ADE16P54113 591 aaKnown RBP8.73□□□□□ -1.01
NUP49YGL172W FRK1Q03002 865 aaPredicted RBP8.73□□□□□ -1.01
NUP49YGL172W HSP104P31539 908 aaKnown RBP8.72□□□□□ -1.01
NUP49YGL172W SPT21P35209 758 aa8.72□□□□□ -1.01
NUP49YGL172W AKL1P38080 1108 aaKnown RBP8.72□□□□□ -1.01
NUP49YGL172W UBP1P25037 809 aa8.71□□□□□ -1.01
NUP49YGL172W YJL181WP46987 611 aa8.71□□□□□ -1.01
NUP49YGL172W LAM6Q08001 693 aa8.71□□□□□ -1.01
NUP49YGL172W SNF2P22082 1703 aa8.71□□□□□ -1.02
NUP49YGL172W PRP40P33203 583 aaKnown RBP8.7□□□□□ -1.02
NUP49YGL172W YKR075CP36155 307 aa8.7□□□□□ -1.02
NUP49YGL172W RTR1P40084 226 aaPredicted RBP8.7□□□□□ -1.02
NUP49YGL172W INP54Q08227 384 aaKnown RBP8.7□□□□□ -1.02
NUP49YGL172W ATG13Q06628 738 aa8.69□□□□□ -1.02
NUP49YGL172W YKR023WP36119 530 aaKnown RBP8.68□□□□□ -1.02
NUP49YGL172W NPR2P39923 615 aa8.68□□□□□ -1.02
NUP49YGL172W OSM1P21375 501 aaKnown RBP8.67□□□□□ -1.02
NUP49YGL172W EDE1P34216 1381 aa8.67□□□□□ -1.02
NUP49YGL172W CTF4Q01454 927 aa8.67□□□□□ -1.02
NUP49YGL172W IOC4Q04213 475 aa8.66□□□□□ -1.02
NUP49YGL172W AOS1Q06624 347 aa8.66□□□□□ -1.02
NUP49YGL172W NUP145P49687 1317 aa8.65□□□□□ -1.02
NUP49YGL172W PRD1P25375 712 aa8.65□□□□□ -1.02
NUP49YGL172W NTH2P35172 780 aa8.65□□□□□ -1.02
NUP49YGL172W MPP10P47083 593 aaKnown RBP8.65□□□□□ -1.02
NUP49YGL172W LYS4P49367 693 aaPredicted RBP8.64□□□□□ -1.03
NUP49YGL172W YDL144CQ07589 356 aa8.64□□□□□ -1.03
NUP49YGL172W YBP2P53169 641 aa8.63□□□□□ -1.03
NUP49YGL172W THI22Q06490 572 aa8.62□□□□□ -1.03
NUP49YGL172W HOP09932 586 aa8.61□□□□□ -1.03
NUP49YGL172W KCC4P25389 1037 aa8.61□□□□□ -1.03
NUP49YGL172W YBL086CP38177 466 aa8.61□□□□□ -1.03
NUP49YGL172W YNL050CP53952 270 aa8.61□□□□□ -1.03
NUP49YGL172W RIM15P43565 1770 aa8.61□□□□□ -1.03
NUP49YGL172W MSB4Q12317 492 aa8.6□□□□□ -1.03
NUP49YGL172W DCD1P06773 312 aa8.59□□□□□ -1.03
NUP49YGL172W GRX1P25373 110 aaKnown RBP8.59□□□□□ -1.03
NUP49YGL172W ALE1Q08548 619 aa8.59□□□□□ -1.03
NUP49YGL172W RTT109Q07794 436 aa8.58□□□□□ -1.04
NUP49YGL172W TUM1Q08686 304 aaKnown RBP8.58□□□□□ -1.04
NUP49YGL172W TPD3P31383 635 aa8.57□□□□□ -1.04
NUP49YGL172W ALD2P47771 506 aa8.57□□□□□ -1.04
NUP49YGL172W CTH1P47976 325 aa8.57□□□□□ -1.04
NUP49YGL172W ZDS1P50111 915 aaKnown RBP8.57□□□□□ -1.04
NUP49YGL172W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.57□□□□□ -1.04not detected
NUP49YGL172W RPP0P05317 312 aaKnown RBP8.56□□□□□ -1.04
NUP49YGL172W UGA3P26370 528 aa8.56□□□□□ -1.04
NUP49YGL172W UGA2P38067 497 aa8.56□□□□□ -1.04
NUP49YGL172W SAP155P43612 1002 aa8.56□□□□□ -1.04
NUP49YGL172W RMT2Q03305 412 aa8.56□□□□□ -1.04
NUP49YGL172W SSA2P10592 639 aaKnown RBP8.55□□□□□ -1.04
NUP49YGL172W YBR287WP38355 427 aa8.55□□□□□ -1.04
NUP49YGL172W GTT3P39996 337 aa8.55□□□□□ -1.04
NUP49YGL172W RRT14P40470 206 aa8.55□□□□□ -1.04
NUP49YGL172W NSE3Q05541 303 aa8.55□□□□□ -1.04
NUP49YGL172W GRE2Q12068 342 aaKnown RBP8.55□□□□□ -1.04
NUP49YGL172W RAD4P14736 754 aa8.54□□□□□ -1.04
NUP49YGL172W MAM1P40065 302 aa8.54□□□□□ -1.04
NUP49YGL172W VPS27P40343 622 aaKnown RBP8.54□□□□□ -1.04
NUP49YGL172W HEF3P53978 1044 aaKnown RBP8.54□□□□□ -1.04
NUP49YGL172W SUI2P20459 304 aaKnown RBP8.54□□□□□ -1.04
NUP49YGL172W OXP1P28273 1286 aa8.54□□□□□ -1.04
NUP49YGL172W BDF1P35817 686 aa8.54□□□□□ -1.04
NUP49YGL172W GYP7P48365 746 aa8.54□□□□□ -1.04
NUP49YGL172W BMS1Q08965 1183 aaKnown RBP8.54□□□□□ -1.04
NUP49YGL172W COQ4O13525 335 aa8.53□□□□□ -1.04
NUP49YGL172W CDC45Q08032 650 aa8.53□□□□□ -1.04
NUP49YGL172W NOP53Q12080 455 aaKnown RBP8.53□□□□□ -1.04
NUP49YGL172W BUG1Q12191 341 aa8.53□□□□□ -1.04
NUP49YGL172W NSR1P27476 414 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
NUP49YGL172W BUD27P43573 796 aaKnown RBP RIP-Chip data8.51□□□□□ -1.05not detected
NUP49YGL172W TFC8Q12308 588 aa8.51□□□□□ -1.05
NUP49YGL172W PRS1P32895 427 aaKnown RBP8.5□□□□□ -1.05
NUP49YGL172W TEA1P47988 759 aa8.5□□□□□ -1.05
NUP49YGL172W ALD3P54114 506 aa8.5□□□□□ -1.05
NUP49YGL172W RVB2Q12464 471 aaKnown RBP8.5□□□□□ -1.05
NUP49YGL172W LYS2P07702 1392 aa8.5□□□□□ -1.05
NUP49YGL172W MAP2P38174 421 aaKnown RBP8.49□□□□□ -1.05
NUP49YGL172W MDG1P53885 366 aa8.48□□□□□ -1.05
NUP49YGL172W ZDS2P54786 942 aa8.48□□□□□ -1.05
NUP49YGL172W SSP2Q08646 371 aa8.48□□□□□ -1.05
NUP49YGL172W NYV1Q12255 253 aa8.48□□□□□ -1.05
NUP49YGL172W SER1P33330 395 aaKnown RBP8.47□□□□□ -1.05
NUP49YGL172W UTP22P53254 1237 aaPredicted RBP8.47□□□□□ -1.05
NUP49YGL172W SRT1Q03175 343 aa8.47□□□□□ -1.05
NUP49YGL172W PHM7Q12252 991 aa8.47□□□□□ -1.05
NUP49YGL172W YGL082WP53155 381 aa8.46□□□□□ -1.05
NUP49YGL172W HPC2Q01448 625 aa8.46□□□□□ -1.05
NUP49YGL172W VPS64Q03944 604 aa8.46□□□□□ -1.05
NUP49YGL172W YOL057WQ08225 711 aa8.46□□□□□ -1.05
NUP49YGL172W YFR016CP43597 1233 aaKnown RBP8.46□□□□□ -1.06
NUP49YGL172W YLR271WQ06152 274 aa8.46□□□□□ -1.06
NUP49YGL172W APL2P36000 726 aaPredicted RBP8.45□□□□□ -1.06
NUP49YGL172W TOS1P38288 455 aa8.45□□□□□ -1.06
NUP49YGL172W CTI6Q08923 506 aa8.45□□□□□ -1.06
NUP49YGL172W ARG8P18544 423 aa8.44□□□□□ -1.06
NUP49YGL172W RIX7Q07844 837 aaKnown RBP8.44□□□□□ -1.06
NUP49YGL172W RPN1P38764 993 aaKnown RBP8.43□□□□□ -1.06
NUP49YGL172W YRB30P53107 440 aaPredicted RBP8.43□□□□□ -1.06
NUP49YGL172W DMA2P53924 522 aa8.43□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms