RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W VAC8P39968 578 aa5.26□□□□□ -1.57
PTR3YFR029W RPS0BP46654 252 aaKnown RBP5.26□□□□□ -1.57
PTR3YFR029W ALD3P54114 506 aa5.26□□□□□ -1.57
PTR3YFR029W YDL121CQ07541 149 aa5.26□□□□□ -1.57
PTR3YFR029W YHL050CP38721 697 aa5.26□□□□□ -1.57
PTR3YFR029W YHR219WP38900 624 aa5.26□□□□□ -1.57
PTR3YFR029W SVF1Q05515 481 aa5.26□□□□□ -1.57
PTR3YFR029W YEL077CQ3E7X8 1277 aa5.26□□□□□ -1.57
PTR3YFR029W MPE1P35728 441 aaKnown RBP5.25□□□□□ -1.57
PTR3YFR029W RRP14P36080 434 aaKnown RBP5.25□□□□□ -1.57
PTR3YFR029W FPR3P38911 411 aaKnown RBP5.25□□□□□ -1.57
PTR3YFR029W TY4A-JP47023 414 aa5.25□□□□□ -1.57
PTR3YFR029W YOL036WQ08206 761 aa5.25□□□□□ -1.57
PTR3YFR029W PPX1P38698 397 aa5.24□□□□□ -1.57
PTR3YFR029W TFG1P41895 735 aaPredicted RBP5.24□□□□□ -1.57
PTR3YFR029W SVL3Q03088 825 aaKnown RBP5.24□□□□□ -1.57
PTR3YFR029W HIF1Q12373 385 aa5.24□□□□□ -1.57
PTR3YFR029W BUD6P41697 788 aa5.24□□□□□ -1.57
PTR3YFR029W SET4P42948 560 aa5.24□□□□□ -1.57
PTR3YFR029W ECM23Q02710 187 aa5.24□□□□□ -1.57
PTR3YFR029W ARG8P18544 423 aa5.23□□□□□ -1.57
PTR3YFR029W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
PTR3YFR029W SRP40P32583 406 aaPredicted RBP5.23□□□□□ -1.57
PTR3YFR029W YJR107WP47145 328 aa5.23□□□□□ -1.57
PTR3YFR029W YNL035CP53962 389 aaKnown RBP5.23□□□□□ -1.57
PTR3YFR029W DNM1P54861 757 aa5.23□□□□□ -1.57
PTR3YFR029W SEC61P32915 480 aa5.23□□□□□ -1.57
PTR3YFR029W ECM16Q04217 1267 aaKnown RBP5.23□□□□□ -1.57
PTR3YFR029W YPR109WQ06104 294 aa5.23□□□□□ -1.57
PTR3YFR029W RAD2P07276 1031 aa5.22□□□□□ -1.57
PTR3YFR029W GAL2P13181 574 aa5.22□□□□□ -1.57
PTR3YFR029W VMA4P22203 233 aaKnown RBP5.22□□□□□ -1.57
PTR3YFR029W YKL091CP33324 310 aaKnown RBP5.22□□□□□ -1.57
PTR3YFR029W MET1P36150 593 aa5.22□□□□□ -1.57
PTR3YFR029W ENP1P38333 483 aaKnown RBP5.22□□□□□ -1.57
PTR3YFR029W BOI2P39969 1040 aa5.22□□□□□ -1.57
PTR3YFR029W YMR196WQ04336 1088 aa5.22□□□□□ -1.57
PTR3YFR029W GIR2Q03768 265 aaPredicted RBP5.21□□□□□ -1.57
PTR3YFR029W ALD6P54115 500 aaKnown RBP5.21□□□□□ -1.58
PTR3YFR029W MNL2Q12205 849 aa5.21□□□□□ -1.58
PTR3YFR029W ERP2P39704 215 aa5.2□□□□□ -1.58
PTR3YFR029W BOL3P39724 118 aa5.2□□□□□ -1.58
PTR3YFR029W YJR142WP47173 342 aa5.2□□□□□ -1.58
PTR3YFR029W NAF1P53919 492 aaKnown RBP5.2□□□□□ -1.58
PTR3YFR029W RPN4Q03465 531 aa5.2□□□□□ -1.58
PTR3YFR029W CSC1Q06538 782 aa5.2□□□□□ -1.58
PTR3YFR029W MPH3P0CE00 602 aa5.19□□□□□ -1.58
PTR3YFR029W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
PTR3YFR029W KAR5Q04746 504 aa5.19□□□□□ -1.58
PTR3YFR029W MCM16Q12262 181 aa5.19□□□□□ -1.58
PTR3YFR029W FRT1Q99332 602 aa5.19□□□□□ -1.58
PTR3YFR029W AI4P03878 556 aa5.19□□□□□ -1.58
PTR3YFR029W MET4P32389 672 aa5.19□□□□□ -1.58
PTR3YFR029W GRS1P38088 690 aaKnown RBP5.19□□□□□ -1.58
PTR3YFR029W UBX7P38349 436 aa5.19□□□□□ -1.58
PTR3YFR029W FYV10P40492 516 aa5.19□□□□□ -1.58
PTR3YFR029W ATG1P53104 897 aa5.19□□□□□ -1.58
PTR3YFR029W RLP24Q07915 199 aaKnown RBP5.19□□□□□ -1.58
PTR3YFR029W PBP2P38151 413 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
PTR3YFR029W FUI1P38196 639 aa5.18□□□□□ -1.58
PTR3YFR029W NSE3Q05541 303 aa5.18□□□□□ -1.58
PTR3YFR029W SSF2Q12153 453 aaPredicted RBP5.18□□□□□ -1.58
PTR3YFR029W SEC6P32844 805 aa5.18□□□□□ -1.58
PTR3YFR029W SLI15P38283 698 aa5.18□□□□□ -1.58
PTR3YFR029W KTR7P40504 517 aa5.18□□□□□ -1.58
PTR3YFR029W POB3Q04636 552 aaKnown RBP5.18□□□□□ -1.58
PTR3YFR029W NUT2Q06213 157 aa5.18□□□□□ -1.58
PTR3YFR029W BCK2P33306 851 aa5.17□□□□□ -1.58
PTR3YFR029W UBP12P39538 1254 aa5.17□□□□□ -1.58
PTR3YFR029W RPT2P40327 437 aaKnown RBP5.17□□□□□ -1.58
PTR3YFR029W YPP1P46951 817 aa5.17□□□□□ -1.58
PTR3YFR029W PUF6Q04373 656 aaKnown RBP5.17□□□□□ -1.58
PTR3YFR029W GYP5Q12344 894 aa5.17□□□□□ -1.58
PTR3YFR029W DAL5P15365 543 aa5.16□□□□□ -1.58
PTR3YFR029W POL5P39985 1022 aaKnown RBP5.16□□□□□ -1.58
PTR3YFR029W THI12P42883 340 aa5.16□□□□□ -1.58
PTR3YFR029W THI5P43534 340 aa5.16□□□□□ -1.58
PTR3YFR029W THI11P47183 340 aa5.16□□□□□ -1.58
PTR3YFR029W MTO1P53070 669 aa5.16□□□□□ -1.58
PTR3YFR029W TMA64Q04600 565 aaKnown RBP5.16□□□□□ -1.58
PTR3YFR029W THI13Q07748 340 aa5.16□□□□□ -1.58
PTR3YFR029W KAR1P11927 433 aa5.16□□□□□ -1.58
PTR3YFR029W NFU1P32860 256 aa5.16□□□□□ -1.58
PTR3YFR029W MNN1P39106 762 aa5.16□□□□□ -1.58
PTR3YFR029W ROM1P53046 1155 aa5.16□□□□□ -1.58
PTR3YFR029W VPS16Q03308 798 aa5.15□□□□□ -1.58
PTR3YFR029W TFB4Q12004 338 aa5.15□□□□□ -1.58
PTR3YFR029W ISF1P32488 338 aa5.14□□□□□ -1.59
PTR3YFR029W GLO3P38682 493 aaKnown RBP5.14□□□□□ -1.59
PTR3YFR029W TAT2P38967 592 aa5.14□□□□□ -1.59
PTR3YFR029W BUB1P41695 1021 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
PTR3YFR029W APL6P46682 809 aa5.14□□□□□ -1.59
PTR3YFR029W PNP1Q05788 311 aa5.14□□□□□ -1.59
PTR3YFR029W COG4Q06096 861 aa5.14□□□□□ -1.59
PTR3YFR029W TRM1P15565 570 aaKnown RBP5.14□□□□□ -1.59
PTR3YFR029W SLY41P22215 453 aa5.14□□□□□ -1.59
PTR3YFR029W YEN1P40028 759 aa5.14□□□□□ -1.59
PTR3YFR029W CDC73Q06697 393 aa5.14□□□□□ -1.59
PTR3YFR029W TRX2P22803 104 aaKnown RBP5.13□□□□□ -1.59
PTR3YFR029W SAP30P38429 201 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 56.9 ms