RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C OCA5P38738 679 aa5.76□□□□□ -1.49
SPB4YFL002C YHR219WP38900 624 aa5.76□□□□□ -1.49
SPB4YFL002C DPL1Q05567 589 aa5.76□□□□□ -1.49
SPB4YFL002C YEL077CQ3E7X8 1277 aa5.76□□□□□ -1.49
SPB4YFL002C ISF1P32488 338 aa5.76□□□□□ -1.49
SPB4YFL002C MDJ2P42834 146 aa5.76□□□□□ -1.49
SPB4YFL002C POL32P47110 350 aa5.76□□□□□ -1.49
SPB4YFL002C PUF6Q04373 656 aaKnown RBP5.76□□□□□ -1.49
SPB4YFL002C EMP47P43555 445 aa5.75□□□□□ -1.49
SPB4YFL002C SVF1Q05515 481 aa5.75□□□□□ -1.49
SPB4YFL002C RAS1P01119 309 aa5.74□□□□□ -1.49
SPB4YFL002C PPX1P38698 397 aa5.74□□□□□ -1.49
SPB4YFL002C KEX2P13134 814 aa5.74□□□□□ -1.49
SPB4YFL002C ATE1P16639 503 aa5.74□□□□□ -1.49
SPB4YFL002C TBF1Q02457 562 aa5.74□□□□□ -1.49
SPB4YFL002C PHO87P25360 923 aa5.73□□□□□ -1.49
SPB4YFL002C GRS1P38088 690 aaKnown RBP5.73□□□□□ -1.49
SPB4YFL002C ERF2Q06551 359 aa5.72□□□□□ -1.49
SPB4YFL002C ISU2Q12056 156 aa5.72□□□□□ -1.49
SPB4YFL002C WHI5Q12416 295 aa5.72□□□□□ -1.49
SPB4YFL002C HAP4P14064 554 aa5.71□□□□□ -1.49
SPB4YFL002C ATG3P40344 310 aa5.71□□□□□ -1.49
SPB4YFL002C ATG1P53104 897 aa5.71□□□□□ -1.49
SPB4YFL002C YPR015CQ12531 247 aa5.71□□□□□ -1.49
SPB4YFL002C RGA1P39083 1007 aa5.71□□□□□ -1.5
SPB4YFL002C PNP1Q05788 311 aa5.71□□□□□ -1.5
SPB4YFL002C FRA1Q07825 749 aa5.71□□□□□ -1.5
SPB4YFL002C NUD1P32336 851 aa5.7□□□□□ -1.5
SPB4YFL002C BRN1P38170 754 aa5.7□□□□□ -1.5
SPB4YFL002C NNF1P47149 201 aa5.7□□□□□ -1.5
SPB4YFL002C STE20Q03497 939 aaKnown RBP5.7□□□□□ -1.5
SPB4YFL002C GYP1Q08484 637 aa5.7□□□□□ -1.5
SPB4YFL002C THI12P42883 340 aa5.69□□□□□ -1.5
SPB4YFL002C THI5P43534 340 aa5.69□□□□□ -1.5
SPB4YFL002C THI11P47183 340 aa5.69□□□□□ -1.5
SPB4YFL002C ACS2P52910 683 aaKnown RBP5.69□□□□□ -1.5
SPB4YFL002C ROM1P53046 1155 aa5.69□□□□□ -1.5
SPB4YFL002C DOS2P54858 310 aa5.69□□□□□ -1.5
SPB4YFL002C UTP13Q05946 817 aaKnown RBP5.69□□□□□ -1.5
SPB4YFL002C THI13Q07748 340 aa5.69□□□□□ -1.5
SPB4YFL002C YDL206WQ12424 762 aa5.69□□□□□ -1.5
SPB4YFL002C TEC1P18412 486 aa5.69□□□□□ -1.5
SPB4YFL002C GUT2P32191 649 aa5.69□□□□□ -1.5
SPB4YFL002C SEC8P32855 1065 aa5.69□□□□□ -1.5
SPB4YFL002C BOL3P39724 118 aa5.69□□□□□ -1.5
SPB4YFL002C OYE2Q03558 400 aaKnown RBP5.69□□□□□ -1.5
SPB4YFL002C SRS2P12954 1174 aa5.68□□□□□ -1.5
SPB4YFL002C APL6P46682 809 aa5.68□□□□□ -1.5
SPB4YFL002C ACF4P47129 309 aa5.68□□□□□ -1.5
SPB4YFL002C RPA14P50106 137 aa5.68□□□□□ -1.5
SPB4YFL002C FPR4Q06205 392 aaPredicted RBP5.68□□□□□ -1.5
SPB4YFL002C FUR4P05316 633 aaKnown RBP5.67□□□□□ -1.5
SPB4YFL002C YPR084WQ06821 456 aa5.67□□□□□ -1.5
SPB4YFL002C PUN1Q06991 263 aa5.67□□□□□ -1.5
SPB4YFL002C STB3Q12427 513 aa5.67□□□□□ -1.5
SPB4YFL002C TSC13Q99190 310 aa5.67□□□□□ -1.5
SPB4YFL002C NPL4P33755 580 aa5.67□□□□□ -1.5
SPB4YFL002C MGE1P38523 228 aa5.67□□□□□ -1.5
SPB4YFL002C SOH1P38633 127 aa5.67□□□□□ -1.5
SPB4YFL002C FIG4P42837 879 aa5.67□□□□□ -1.5
SPB4YFL002C YJR107WP47145 328 aa5.67□□□□□ -1.5
SPB4YFL002C NUT2Q06213 157 aa5.67□□□□□ -1.5
SPB4YFL002C GAS4Q08271 471 aa5.67□□□□□ -1.5
SPB4YFL002C RAM1P22007 431 aa5.66□□□□□ -1.5
SPB4YFL002C TUB4P53378 473 aa5.66□□□□□ -1.5
SPB4YFL002C AGE1Q04412 482 aa5.66□□□□□ -1.5
SPB4YFL002C YPR097WQ06839 1073 aa5.66□□□□□ -1.5
SPB4YFL002C SPC42P36094 363 aa5.65□□□□□ -1.5
SPB4YFL002C QDR1P40475 563 aa5.65□□□□□ -1.5
SPB4YFL002C GLO3P38682 493 aaKnown RBP5.64□□□□□ -1.51
SPB4YFL002C ALD4P46367 519 aaKnown RBP5.64□□□□□ -1.51
SPB4YFL002C TRK1P12685 1235 aa5.64□□□□□ -1.51
SPB4YFL002C AMS1P22855 1083 aa5.64□□□□□ -1.51
SPB4YFL002C VAN1P23642 535 aa5.64□□□□□ -1.51
SPB4YFL002C JIP5Q06214 492 aaPredicted RBP5.64□□□□□ -1.51
SPB4YFL002C ALR1Q08269 859 aa5.64□□□□□ -1.51
SPB4YFL002C FRT1Q99332 602 aa5.64□□□□□ -1.51
SPB4YFL002C MET4P32389 672 aa5.63□□□□□ -1.51
SPB4YFL002C CST6P40535 587 aa5.63□□□□□ -1.51
SPB4YFL002C PDR1P12383 1068 aa5.62□□□□□ -1.51
SPB4YFL002C PDI1P17967 522 aaKnown RBP5.62□□□□□ -1.51
SPB4YFL002C ISM1P48526 1002 aa5.62□□□□□ -1.51
SPB4YFL002C MAG2Q06436 670 aaKnown RBP5.62□□□□□ -1.51
SPB4YFL002C MET1P36150 593 aa5.62□□□□□ -1.51
SPB4YFL002C NMD2P38798 1089 aaKnown RBP5.62□□□□□ -1.51
SPB4YFL002C STR2P47164 639 aa5.62□□□□□ -1.51
SPB4YFL002C YAF9P53930 226 aa5.62□□□□□ -1.51
SPB4YFL002C TRS33Q99394 268 aa5.62□□□□□ -1.51
SPB4YFL002C GCD11P32481 527 aaKnown RBP5.6□□□□□ -1.51
SPB4YFL002C YFL034WP43564 1073 aa5.6□□□□□ -1.51
SPB4YFL002C LSO1Q3E827 93 aa5.6□□□□□ -1.51
SPB4YFL002C SEC2P17065 759 aa5.6□□□□□ -1.51
SPB4YFL002C FAR11P53917 953 aa5.6□□□□□ -1.51
SPB4YFL002C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SPB4YFL002C MNL2Q12205 849 aa5.6□□□□□ -1.51
SPB4YFL002C YOL098CQ12496 1037 aa5.6□□□□□ -1.51
SPB4YFL002C TY1A-DR4O74302 440 aa5.59□□□□□ -1.51
SPB4YFL002C PDC1P06169 563 aaKnown RBP5.59□□□□□ -1.51
SPB4YFL002C TY1A-HP0C2I4 478 aaKnown RBP5.59□□□□□ -1.51
SPB4YFL002C TY1A-AP0CX57 440 aa5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 49.2 ms