RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W SSA2P10592 639 aaKnown RBP7.64□□□□□ -1.19
PRE1YER012W MRT4P33201 236 aaKnown RBP7.64□□□□□ -1.19
PRE1YER012W PTK2P47116 818 aaKnown RBP7.64□□□□□ -1.19
PRE1YER012W YPL062WQ02781 134 aa7.63□□□□□ -1.19
PRE1YER012W LCB5Q06147 687 aaKnown RBP7.61□□□□□ -1.19
PRE1YER012W SRF1Q12516 437 aa7.61□□□□□ -1.19
PRE1YER012W TEC1P18412 486 aa7.58□□□□□ -1.2
PRE1YER012W MAK16P10962 306 aaPredicted RBP7.57□□□□□ -1.2
PRE1YER012W YBL086CP38177 466 aa7.57□□□□□ -1.2
PRE1YER012W EMW1P42842 904 aaKnown RBP7.56□□□□□ -1.2
PRE1YER012W OPT2Q06593 877 aa7.56□□□□□ -1.2
PRE1YER012W YPR084WQ06821 456 aa7.56□□□□□ -1.2
PRE1YER012W TFB3Q03290 321 aa7.55□□□□□ -1.2
PRE1YER012W PKC1P24583 1151 aa7.54□□□□□ -1.2
PRE1YER012W YDL176WQ12027 708 aa7.54□□□□□ -1.2
PRE1YER012W DLD1P32891 587 aa7.53□□□□□ -1.2
PRE1YER012W DFG5Q05031 458 aa7.52□□□□□ -1.21
PRE1YER012W ISF1P32488 338 aa7.51□□□□□ -1.21
PRE1YER012W MKS1P34072 584 aa7.51□□□□□ -1.21
PRE1YER012W AAD14P42884 376 aa7.51□□□□□ -1.21
PRE1YER012W CAF120P53836 1060 aa7.51□□□□□ -1.21
PRE1YER012W YBL036CP38197 257 aa7.5□□□□□ -1.21
PRE1YER012W NUP85P46673 744 aa7.5□□□□□ -1.21
PRE1YER012W HPC2Q01448 625 aa7.5□□□□□ -1.21
PRE1YER012W ARG82P07250 355 aa7.49□□□□□ -1.21
PRE1YER012W YDJ1P25491 409 aaKnown RBP7.49□□□□□ -1.21
PRE1YER012W RGA2Q06407 1009 aa7.49□□□□□ -1.21
PRE1YER012W GUT2P32191 649 aa7.48□□□□□ -1.21
PRE1YER012W BRL1P38770 471 aa7.48□□□□□ -1.21
PRE1YER012W YLR346CQ06139 101 aa7.47□□□□□ -1.21
PRE1YER012W STE20Q03497 939 aaKnown RBP7.46□□□□□ -1.22
PRE1YER012W MIP1P15801 1254 aa7.45□□□□□ -1.22
PRE1YER012W EMP47P43555 445 aa7.45□□□□□ -1.22
PRE1YER012W BIO2P32451 375 aa7.44□□□□□ -1.22
PRE1YER012W CSE4P36012 229 aa7.44□□□□□ -1.22
PRE1YER012W RTT106P40161 455 aa7.44□□□□□ -1.22
PRE1YER012W YJR098CP47139 656 aa7.44□□□□□ -1.22
PRE1YER012W LSC2P53312 427 aa7.44□□□□□ -1.22
PRE1YER012W NAF1P53919 492 aaKnown RBP7.44□□□□□ -1.22
PRE1YER012W FRA1Q07825 749 aa7.44□□□□□ -1.22
PRE1YER012W FBP26P32604 452 aa7.43□□□□□ -1.22
PRE1YER012W GLY1P37303 387 aaKnown RBP7.43□□□□□ -1.22
PRE1YER012W SCW11P53189 542 aa7.43□□□□□ -1.22
PRE1YER012W ATG20Q07528 640 aa7.43□□□□□ -1.22
PRE1YER012W BDS1Q08347 646 aa7.43□□□□□ -1.22
PRE1YER012W MCM16Q12262 181 aa7.43□□□□□ -1.22
PRE1YER012W TCB1Q12466 1186 aa7.43□□□□□ -1.22
PRE1YER012W YIR007WP40566 764 aa7.42□□□□□ -1.22
PRE1YER012W TY1A-BLQ12266 440 aa7.42□□□□□ -1.22
PRE1YER012W ACO2P39533 789 aa7.41□□□□□ -1.22
PRE1YER012W YNL108CP53929 270 aa7.41□□□□□ -1.22
PRE1YER012W STE6P12866 1290 aa7.39□□□□□ -1.23
PRE1YER012W ISU1Q03020 165 aa7.38□□□□□ -1.23
PRE1YER012W ISR1Q06098 443 aaKnown RBP7.38□□□□□ -1.23
PRE1YER012W YJL007CP47080 104 aa7.37□□□□□ -1.23
PRE1YER012W UBP2Q01476 1272 aa7.37□□□□□ -1.23
PRE1YER012W ENO2P00925 437 aaKnown RBP7.35□□□□□ -1.23
PRE1YER012W SPT5P27692 1063 aaKnown RBP7.35□□□□□ -1.23
PRE1YER012W HAL5P38970 855 aaKnown RBP7.34□□□□□ -1.23
PRE1YER012W OSH7P38755 437 aa7.32□□□□□ -1.24
PRE1YER012W APL6P46682 809 aa7.32□□□□□ -1.24
PRE1YER012W SUP45P12385 437 aaKnown RBP7.31□□□□□ -1.24
PRE1YER012W SOH1P38633 127 aa7.31□□□□□ -1.24
PRE1YER012W ROG3P43602 733 aa7.31□□□□□ -1.24
PRE1YER012W DAT1P13483 248 aaKnown RBP7.3□□□□□ -1.24
PRE1YER012W WTM2Q12206 467 aa7.3□□□□□ -1.24
PRE1YER012W DLD3P39976 496 aaKnown RBP7.29□□□□□ -1.24
PRE1YER012W HPF1Q05164 967 aa7.29□□□□□ -1.24
PRE1YER012W UTR2P32623 467 aa7.28□□□□□ -1.24
PRE1YER012W BIM1P40013 344 aa7.28□□□□□ -1.24
PRE1YER012W ATG32P40458 529 aa7.28□□□□□ -1.24
PRE1YER012W MRX12P47084 519 aa7.28□□□□□ -1.24
PRE1YER012W TY1A-MR1Q04215 440 aa7.28□□□□□ -1.24
PRE1YER012W UTP7P40055 554 aaKnown RBP7.27□□□□□ -1.25
PRE1YER012W YGR035CP53222 116 aa7.27□□□□□ -1.25
PRE1YER012W NAM8Q00539 523 aaKnown RBP7.27□□□□□ -1.25
PRE1YER012W CCP1P00431 361 aa7.26□□□□□ -1.25
PRE1YER012W CDC19P00549 500 aaKnown RBP7.26□□□□□ -1.25
PRE1YER012W RIM21P48565 533 aa7.26□□□□□ -1.25
PRE1YER012W RDS2P19541 446 aaKnown RBP7.25□□□□□ -1.25
PRE1YER012W HDA3Q06623 655 aa7.24□□□□□ -1.25
PRE1YER012W SPT2P06843 333 aaPredicted RBP7.23□□□□□ -1.25
PRE1YER012W TIF1P10081 395 aaKnown RBP7.23□□□□□ -1.25
PRE1YER012W YPP1P46951 817 aa7.23□□□□□ -1.25
PRE1YER012W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
PRE1YER012W ENO1P00924 437 aaKnown RBP7.21□□□□□ -1.26
PRE1YER012W RPP2BP02400 110 aaKnown RBP7.21□□□□□ -1.26
PRE1YER012W TRK2P28584 889 aa7.21□□□□□ -1.26
PRE1YER012W SSN3P39073 555 aa7.21□□□□□ -1.26
PRE1YER012W TY1A-DR3Q12441 440 aa7.21□□□□□ -1.26
PRE1YER012W RTG2P32608 588 aaKnown RBP7.2□□□□□ -1.26
PRE1YER012W TBS1P38114 1094 aa7.2□□□□□ -1.26
PRE1YER012W DAL1P32375 460 aa7.19□□□□□ -1.26
PRE1YER012W ATG3P40344 310 aa7.19□□□□□ -1.26
PRE1YER012W SLX8P40072 274 aa7.18□□□□□ -1.26
PRE1YER012W RPL34BP40525 121 aaKnown RBP7.18□□□□□ -1.26
PRE1YER012W VTC4P47075 721 aa7.18□□□□□ -1.26
PRE1YER012W MRX10Q05648 414 aa7.18□□□□□ -1.26
PRE1YER012W UTP13Q05946 817 aaKnown RBP7.18□□□□□ -1.26
PRE1YER012W SLA1P32790 1244 aa7.17□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms