RNA–Protein interactions for RNA: YDR400W

URH1, Transcript of Uridine nucleosidase (uridine-cytidine N-ribohydrolase), yeast

Gene URH1, Length 1,023 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URH1	YDR400W	KXD1	P53158	218 aa		11.15	□□□□□ -0.62
URH1	YDR400W	GEF1	P37020	779 aa		11.14	□□□□□ -0.63
URH1	YDR400W	FIG4	P42837	879 aa		11.14	□□□□□ -0.63
URH1	YDR400W	NOB1	Q08444	459 aa	Known RBP	11.14	□□□□□ -0.63
URH1	YDR400W	RDS2	P19541	446 aa	Known RBP	11.13	□□□□□ -0.63
URH1	YDR400W	EMP47	P43555	445 aa		11.13	□□□□□ -0.63
URH1	YDR400W	GYP1	Q08484	637 aa		11.13	□□□□□ -0.63
URH1	YDR400W	TEC1	P18412	486 aa		11.12	□□□□□ -0.63
URH1	YDR400W	SIS2	P36024	562 aa		11.11	□□□□□ -0.63
URH1	YDR400W	HXT10	P43581	546 aa		11.11	□□□□□ -0.63
URH1	YDR400W	PEP12	P32854	288 aa		11.09	□□□□□ -0.63
URH1	YDR400W	YPR084W	Q06821	456 aa		11.09	□□□□□ -0.63
URH1	YDR400W	HIR3	P47171	1648 aa		11.09	□□□□□ -0.63
URH1	YDR400W	PUP1	P25043	261 aa		11.08	□□□□□ -0.64
URH1	YDR400W	SAS4	Q04003	481 aa		11.08	□□□□□ -0.64
URH1	YDR400W	YML083C	Q04526	418 aa		11.08	□□□□□ -0.64
URH1	YDR400W	MOD5	P07884	428 aa		11.06	□□□□□ -0.64
URH1	YDR400W	GUT2	P32191	649 aa		11.06	□□□□□ -0.64
URH1	YDR400W	TGL4	P36165	910 aa		11.06	□□□□□ -0.64
URH1	YDR400W	RRD1	P40454	393 aa	Known RBP	11.06	□□□□□ -0.64
URH1	YDR400W	STE20	Q03497	939 aa	Known RBP	11.06	□□□□□ -0.64
URH1	YDR400W	FRA1	Q07825	749 aa		11.06	□□□□□ -0.64
URH1	YDR400W	KTR7	P40504	517 aa		11.05	□□□□□ -0.64
URH1	YDR400W	TPD3	P31383	635 aa		11.04	□□□□□ -0.64
URH1	YDR400W	ENV9	Q08651	330 aa		11.03	□□□□□ -0.64
URH1	YDR400W	VAC17	P25591	423 aa		11.02	□□□□□ -0.65
URH1	YDR400W	VRP1	P37370	817 aa		11.01	□□□□□ -0.65
URH1	YDR400W	XRN1	P22147	1528 aa	Known RBP	11	□□□□□ -0.65
URH1	YDR400W	MRX12	P47084	519 aa		11	□□□□□ -0.65
URH1	YDR400W	RPL34A	P87262	121 aa	Predicted RBP	10.99	□□□□□ -0.65
URH1	YDR400W	SDH2	P21801	266 aa		10.98	□□□□□ -0.65
URH1	YDR400W	ITT1	Q04638	464 aa		10.98	□□□□□ -0.65
URH1	YDR400W	APL6	P46682	809 aa		10.97	□□□□□ -0.65
URH1	YDR400W	ECM23	Q02710	187 aa		10.97	□□□□□ -0.65
URH1	YDR400W	SOH1	P38633	127 aa		10.96	□□□□□ -0.65
URH1	YDR400W	MRF1	P30775	413 aa	Predicted RBP	10.95	□□□□□ -0.66
URH1	YDR400W	SLX8	P40072	274 aa		10.95	□□□□□ -0.66
URH1	YDR400W	ATG3	P40344	310 aa		10.95	□□□□□ -0.66
URH1	YDR400W	YML020W	Q03722	664 aa		10.94	□□□□□ -0.66
URH1	YDR400W	PUS5	Q06244	254 aa		10.93	□□□□□ -0.66
URH1	YDR400W	GAL2	P13181	574 aa		10.92	□□□□□ -0.66
URH1	YDR400W	BDP1	P46678	594 aa		10.92	□□□□□ -0.66
URH1	YDR400W	IXR1	P33417	597 aa		10.9	□□□□□ -0.66
URH1	YDR400W	UTP13	Q05946	817 aa	Known RBP	10.9	□□□□□ -0.66
URH1	YDR400W	KIP2	P28743	706 aa		10.89	□□□□□ -0.67
URH1	YDR400W	CST6	P40535	587 aa		10.89	□□□□□ -0.67
URH1	YDR400W	FRK1	Q03002	865 aa	Predicted RBP	10.89	□□□□□ -0.67
URH1	YDR400W	DNA2	P38859	1522 aa		10.89	□□□□□ -0.67
URH1	YDR400W	UBX7	P38349	436 aa		10.88	□□□□□ -0.67
URH1	YDR400W	CDC3	P32457	520 aa	Known RBP	10.87	□□□□□ -0.67
URH1	YDR400W	BCK2	P33306	851 aa		10.86	□□□□□ -0.67
URH1	YDR400W	HAL5	P38970	855 aa	Known RBP	10.86	□□□□□ -0.67
URH1	YDR400W	REV3	P14284	1504 aa		10.85	□□□□□ -0.67
URH1	YDR400W	ISR1	Q06098	443 aa	Known RBP	10.85	□□□□□ -0.67
URH1	YDR400W	PHO87	P25360	923 aa		10.84	□□□□□ -0.67
URH1	YDR400W	ACS2	P52910	683 aa	Known RBP	10.83	□□□□□ -0.68
URH1	YDR400W	APP1	P53933	587 aa		10.83	□□□□□ -0.68
URH1	YDR400W	SYH1	Q02875	849 aa	Known RBP	10.83	□□□□□ -0.68
URH1	YDR400W	NOP8	Q08287	484 aa	Predicted RBP	10.83	□□□□□ -0.68
URH1	YDR400W	ATG20	Q07528	640 aa		10.82	□□□□□ -0.68
URH1	YDR400W	SIN3	P22579	1536 aa		10.81	□□□□□ -0.68
URH1	YDR400W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	10.81	□□□□□ -0.68	not detected
URH1	YDR400W	YEL077C	Q3E7X8	1277 aa		10.81	□□□□□ -0.68
URH1	YDR400W	KOG1	P38873	1557 aa		10.81	□□□□□ -0.68
URH1	YDR400W	MIP1	P15801	1254 aa		10.8	□□□□□ -0.68
URH1	YDR400W	HAP4	P14064	554 aa		10.79	□□□□□ -0.68
URH1	YDR400W	PDI1	P17967	522 aa	Known RBP	10.79	□□□□□ -0.68
URH1	YDR400W	EMW1	P42842	904 aa	Known RBP	10.79	□□□□□ -0.68
URH1	YDR400W	ROM1	P53046	1155 aa		10.78	□□□□□ -0.68
URH1	YDR400W	TSC13	Q99190	310 aa		10.78	□□□□□ -0.68
URH1	YDR400W	HDA3	Q06623	655 aa		10.76	□□□□□ -0.69
URH1	YDR400W	TPS3	P38426	1054 aa	Known RBP	10.75	□□□□□ -0.69
URH1	YDR400W	XDJ1	P39102	459 aa		10.75	□□□□□ -0.69
URH1	YDR400W	HAT1	Q12341	374 aa		10.75	□□□□□ -0.69
URH1	YDR400W	AIM9	P40053	627 aa	Known RBP	10.74	□□□□□ -0.69
URH1	YDR400W	GAS4	Q08271	471 aa		10.74	□□□□□ -0.69
URH1	YDR400W	THO2	P53552	1597 aa	Known RBP	10.73	□□□□□ -0.69
URH1	YDR400W	SSK2	P53599	1579 aa		10.73	□□□□□ -0.69
URH1	YDR400W	SSF1	P38789	453 aa	Predicted RBP	10.72	□□□□□ -0.69
URH1	YDR400W	AMS1	P22855	1083 aa		10.71	□□□□□ -0.69
URH1	YDR400W	CWC15	Q03772	175 aa	Known RBP	10.71	□□□□□ -0.69
URH1	YDR400W	MKS1	P34072	584 aa		10.7	□□□□□ -0.7
URH1	YDR400W	YFL034W	P43564	1073 aa		10.7	□□□□□ -0.7
URH1	YDR400W	PUF6	Q04373	656 aa	Known RBP	10.7	□□□□□ -0.7
URH1	YDR400W	FBP26	P32604	452 aa		10.69	□□□□□ -0.7
URH1	YDR400W	MRT4	P33201	236 aa	Known RBP	10.69	□□□□□ -0.7
URH1	YDR400W	ISU1	Q03020	165 aa		10.69	□□□□□ -0.7
URH1	YDR400W	TAF2	P23255	1407 aa		10.68	□□□□□ -0.7
URH1	YDR400W	NTH2	P35172	780 aa		10.68	□□□□□ -0.7
URH1	YDR400W	CLA4	P48562	842 aa		10.67	□□□□□ -0.7
URH1	YDR400W	BUD4	P47136	1447 aa		10.67	□□□□□ -0.7
URH1	YDR400W	ECM5	Q03214	1411 aa		10.67	□□□□□ -0.7
URH1	YDR400W	UTR2	P32623	467 aa		10.66	□□□□□ -0.7
URH1	YDR400W	HED1	Q03937	162 aa		10.66	□□□□□ -0.7
URH1	YDR400W	SPT2	P06843	333 aa	Predicted RBP	10.65	□□□□□ -0.7
URH1	YDR400W	VAN1	P23642	535 aa		10.65	□□□□□ -0.7
URH1	YDR400W	PUN1	Q06991	263 aa		10.65	□□□□□ -0.7
URH1	YDR400W	RAS1	P01119	309 aa		10.64	□□□□□ -0.71
URH1	YDR400W	RPS6A	P0CX37	236 aa	Known RBP	10.64	□□□□□ -0.71
URH1	YDR400W	RPS6B	P0CX38	236 aa	Predicted RBP	10.64	□□□□□ -0.71

Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms