RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C SCJ1P25303 377 aa6.42□□□□□ -1.38
CDC40YDR364C MMP1Q12372 583 aa6.39□□□□□ -1.39
CDC40YDR364C ARG82P07250 355 aa6.38□□□□□ -1.39
CDC40YDR364C VAC17P25591 423 aa6.38□□□□□ -1.39
CDC40YDR364C NRD1P53617 575 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
CDC40YDR364C LSC2P53312 427 aa6.37□□□□□ -1.39
CDC40YDR364C UBP2Q01476 1272 aa6.37□□□□□ -1.39
CDC40YDR364C YBL086CP38177 466 aa6.36□□□□□ -1.39
CDC40YDR364C AAD14P42884 376 aa6.36□□□□□ -1.39
CDC40YDR364C PUS1Q12211 544 aaKnown RBP6.36□□□□□ -1.39
CDC40YDR364C GLN1P32288 370 aaKnown RBP6.35□□□□□ -1.39
CDC40YDR364C YPR204WQ08995 1032 aa6.34□□□□□ -1.39
CDC40YDR364C MDJ1P35191 511 aa6.32□□□□□ -1.4
CDC40YDR364C YJR098CP47139 656 aa6.32□□□□□ -1.4
CDC40YDR364C ESS1P22696 170 aa6.31□□□□□ -1.4
CDC40YDR364C RSC30P38781 883 aa6.31□□□□□ -1.4
CDC40YDR364C EMW1P42842 904 aaKnown RBP6.31□□□□□ -1.4
CDC40YDR364C ATF2P53296 535 aa6.31□□□□□ -1.4
CDC40YDR364C OSH7P38755 437 aa6.3□□□□□ -1.4
CDC40YDR364C PHM7Q12252 991 aa6.3□□□□□ -1.4
CDC40YDR364C YJU3P28321 313 aa6.29□□□□□ -1.4
CDC40YDR364C DPH6Q12429 685 aa6.29□□□□□ -1.4
CDC40YDR364C TCB1Q12466 1186 aa6.29□□□□□ -1.4
CDC40YDR364C CCP1P00431 361 aa6.28□□□□□ -1.4
CDC40YDR364C DMA1P38823 416 aa6.28□□□□□ -1.4
CDC40YDR364C ROG3P43602 733 aa6.28□□□□□ -1.4
CDC40YDR364C TY1A-MR1Q04215 440 aa6.28□□□□□ -1.4
CDC40YDR364C DLD1P32891 587 aa6.27□□□□□ -1.41
CDC40YDR364C APP1P53933 587 aa6.27□□□□□ -1.41
CDC40YDR364C LYS5P50113 272 aa6.24□□□□□ -1.41
CDC40YDR364C ITT1Q04638 464 aa6.24□□□□□ -1.41
CDC40YDR364C YNR021WP53723 404 aaKnown RBP6.23□□□□□ -1.41
CDC40YDR364C CCT8P47079 568 aaKnown RBP6.22□□□□□ -1.41
CDC40YDR364C FIG4P42837 879 aa6.21□□□□□ -1.41
CDC40YDR364C YFL066CP43538 392 aa6.21□□□□□ -1.41
CDC40YDR364C KTR1P27810 393 aaKnown RBP6.2□□□□□ -1.42
CDC40YDR364C MKS1P34072 584 aa6.2□□□□□ -1.42
CDC40YDR364C DFG5Q05031 458 aa6.19□□□□□ -1.42
CDC40YDR364C JJJ3P47138 172 aa6.18□□□□□ -1.42
CDC40YDR364C PKH3Q03306 898 aaPredicted RBP6.18□□□□□ -1.42
CDC40YDR364C ARG8P18544 423 aa6.18□□□□□ -1.42
CDC40YDR364C GLC3P32775 704 aa6.17□□□□□ -1.42
CDC40YDR364C BDS1Q08347 646 aa6.17□□□□□ -1.42
CDC40YDR364C CDC19P00549 500 aaKnown RBP6.16□□□□□ -1.42
CDC40YDR364C NAM8Q00539 523 aaKnown RBP6.16□□□□□ -1.42
CDC40YDR364C STE6P12866 1290 aa6.15□□□□□ -1.43
CDC40YDR364C VTC4P47075 721 aa6.15□□□□□ -1.43
CDC40YDR364C NSG2P53898 299 aa6.15□□□□□ -1.43
CDC40YDR364C FBP26P32604 452 aa6.14□□□□□ -1.43
CDC40YDR364C TAF7Q05021 590 aa6.14□□□□□ -1.43
CDC40YDR364C CSN12P47130 423 aa6.13□□□□□ -1.43
CDC40YDR364C YPR084WQ06821 456 aa6.13□□□□□ -1.43
CDC40YDR364C AIM7Q12156 149 aa6.13□□□□□ -1.43
CDC40YDR364C TEC1P18412 486 aa6.12□□□□□ -1.43
CDC40YDR364C DAL1P32375 460 aa6.1□□□□□ -1.43
CDC40YDR364C RAD59Q12223 238 aa6.09□□□□□ -1.43
CDC40YDR364C AI1P03875 834 aa6.07□□□□□ -1.44
CDC40YDR364C CUZ1P53899 274 aa6.07□□□□□ -1.44
CDC40YDR364C THI72Q08579 599 aa6.07□□□□□ -1.44
CDC40YDR364C ISU1Q03020 165 aa6.06□□□□□ -1.44
CDC40YDR364C GUT2P32191 649 aa6.06□□□□□ -1.44
CDC40YDR364C CEM1P39525 442 aa6.04□□□□□ -1.44
CDC40YDR364C ATG20Q07528 640 aa6.04□□□□□ -1.44
CDC40YDR364C RPP2BP02400 110 aaKnown RBP6.03□□□□□ -1.44
CDC40YDR364C MAK16P10962 306 aaPredicted RBP6.02□□□□□ -1.45
CDC40YDR364C DLD3P39976 496 aaKnown RBP6.01□□□□□ -1.45
CDC40YDR364C NAF1P53919 492 aaKnown RBP6.01□□□□□ -1.45
CDC40YDR364C SKN7P38889 622 aa6□□□□□ -1.45
CDC40YDR364C UBP15P50101 1230 aa6□□□□□ -1.45
CDC40YDR364C SYT1Q06836 1226 aa6□□□□□ -1.45
CDC40YDR364C FRA1Q07825 749 aa6□□□□□ -1.45
CDC40YDR364C DIT1P21623 536 aa5.99□□□□□ -1.45
CDC40YDR364C STE20Q03497 939 aaKnown RBP5.99□□□□□ -1.45
CDC40YDR364C MSN5P52918 1224 aa5.98□□□□□ -1.45
CDC40YDR364C ADE12P80210 433 aaKnown RBP5.98□□□□□ -1.45
CDC40YDR364C YMR265CQ03508 461 aaKnown RBP5.98□□□□□ -1.45
CDC40YDR364C YPR053CQ6Q5F3 151 aa5.98□□□□□ -1.45
CDC40YDR364C SLA1P32790 1244 aa5.97□□□□□ -1.45
CDC40YDR364C SSN3P39073 555 aa5.97□□□□□ -1.45
CDC40YDR364C YDR461C-AQ2V2P7 80 aa5.97□□□□□ -1.45
CDC40YDR364C SSA2P10592 639 aaKnown RBP5.96□□□□□ -1.45
CDC40YDR364C WTM2Q12206 467 aa5.95□□□□□ -1.46
CDC40YDR364C SPT2P06843 333 aaPredicted RBP5.94□□□□□ -1.46
CDC40YDR364C SBP1P10080 294 aaKnown RBP5.94□□□□□ -1.46
CDC40YDR364C KRE33P53914 1056 aaKnown RBP5.94□□□□□ -1.46
CDC40YDR364C MRX12P47084 519 aa5.93□□□□□ -1.46
CDC40YDR364C TY1A-DR3Q12441 440 aa5.93□□□□□ -1.46
CDC40YDR364C SBE2P42223 864 aaKnown RBP5.92□□□□□ -1.46
CDC40YDR364C YMR187CQ03236 431 aa5.92□□□□□ -1.46
CDC40YDR364C TDA6Q06466 467 aa5.92□□□□□ -1.46
CDC40YDR364C APL6P46682 809 aa5.91□□□□□ -1.46
CDC40YDR364C DAT1P13483 248 aaKnown RBP5.9□□□□□ -1.47
CDC40YDR364C CSE4P36012 229 aa5.9□□□□□ -1.47
CDC40YDR364C ISR1Q06098 443 aaKnown RBP5.9□□□□□ -1.47
CDC40YDR364C GLT1Q12680 2145 aaKnown RBP5.9□□□□□ -1.47
CDC40YDR364C MCX1P38323 520 aaPredicted RBP5.89□□□□□ -1.47
CDC40YDR364C UTR2P32623 467 aa5.88□□□□□ -1.47
CDC40YDR364C AHP1P38013 176 aaKnown RBP5.88□□□□□ -1.47
CDC40YDR364C EMP47P43555 445 aa5.87□□□□□ -1.47
CDC40YDR364C TBS1P38114 1094 aa5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms