RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C MRX10Q05648 414 aa7.3□□□□□ -1.24
NUP42YDR192C YPR015CQ12531 247 aa7.3□□□□□ -1.24
NUP42YDR192C TEC1P18412 486 aa7.29□□□□□ -1.24
NUP42YDR192C TPD3P31383 635 aa7.28□□□□□ -1.24
NUP42YDR192C GUT2P32191 649 aa7.28□□□□□ -1.24
NUP42YDR192C PAC1P39946 494 aaKnown RBP7.28□□□□□ -1.24
NUP42YDR192C GYP1Q08484 637 aa7.28□□□□□ -1.24
NUP42YDR192C PDC1P06169 563 aaKnown RBP7.27□□□□□ -1.25
NUP42YDR192C HXT10P43581 546 aa7.27□□□□□ -1.25
NUP42YDR192C MRF1P30775 413 aaPredicted RBP7.26□□□□□ -1.25
NUP42YDR192C RPL34AP87262 121 aaPredicted RBP7.26□□□□□ -1.25
NUP42YDR192C STE20Q03497 939 aaKnown RBP7.26□□□□□ -1.25
NUP42YDR192C FRA1Q07825 749 aa7.26□□□□□ -1.25
NUP42YDR192C ENV9Q08651 330 aa7.25□□□□□ -1.25
NUP42YDR192C RRD1P40454 393 aaKnown RBP7.24□□□□□ -1.25
NUP42YDR192C FIG4P42837 879 aa7.23□□□□□ -1.25
NUP42YDR192C EMP47P43555 445 aa7.23□□□□□ -1.25
NUP42YDR192C UTP13Q05946 817 aaKnown RBP7.23□□□□□ -1.25
NUP42YDR192C ECM5Q03214 1411 aa7.23□□□□□ -1.25
NUP42YDR192C PEP12P32854 288 aa7.21□□□□□ -1.26
NUP42YDR192C TGL4P36165 910 aa7.21□□□□□ -1.26
NUP42YDR192C SPT6P23615 1451 aaKnown RBP7.2□□□□□ -1.26
NUP42YDR192C VAC17P25591 423 aa7.2□□□□□ -1.26
NUP42YDR192C NOB1Q08444 459 aaKnown RBP7.2□□□□□ -1.26
NUP42YDR192C HSL1P34244 1518 aa7.2□□□□□ -1.26
NUP42YDR192C MOD5P07884 428 aa7.19□□□□□ -1.26
NUP42YDR192C RDS2P19541 446 aaKnown RBP7.19□□□□□ -1.26
NUP42YDR192C PUP1P25043 261 aa7.19□□□□□ -1.26
NUP42YDR192C ISF1P32488 338 aa7.19□□□□□ -1.26
NUP42YDR192C YPR084WQ06821 456 aa7.19□□□□□ -1.26
NUP42YDR192C SLX8P40072 274 aa7.18□□□□□ -1.26
NUP42YDR192C CDC3P32457 520 aaKnown RBP7.17□□□□□ -1.26
NUP42YDR192C APL6P46682 809 aa7.16□□□□□ -1.26
NUP42YDR192C GAL2P13181 574 aa7.15□□□□□ -1.26
NUP42YDR192C VRP1P37370 817 aa7.15□□□□□ -1.26
NUP42YDR192C KIP2P28743 706 aa7.14□□□□□ -1.27
NUP42YDR192C YEL077CQ3E7X8 1277 aa7.14□□□□□ -1.27
NUP42YDR192C HAP4P14064 554 aa7.13□□□□□ -1.27
NUP42YDR192C PHO87P25360 923 aa7.13□□□□□ -1.27
NUP42YDR192C KTR7P40504 517 aa7.13□□□□□ -1.27
NUP42YDR192C SYH1Q02875 849 aaKnown RBP7.13□□□□□ -1.27
NUP42YDR192C YML020WQ03722 664 aa7.13□□□□□ -1.27
NUP42YDR192C BCK2P33306 851 aa7.12□□□□□ -1.27
NUP42YDR192C IXR1P33417 597 aa7.12□□□□□ -1.27
NUP42YDR192C SOH1P38633 127 aa7.12□□□□□ -1.27
NUP42YDR192C YFL034WP43564 1073 aa7.12□□□□□ -1.27
NUP42YDR192C ECM23Q02710 187 aa7.12□□□□□ -1.27
NUP42YDR192C YML083CQ04526 418 aa7.11□□□□□ -1.27
NUP42YDR192C MDS3P53094 1487 aa7.11□□□□□ -1.27
NUP42YDR192C NOP8Q08287 484 aaPredicted RBP7.1□□□□□ -1.27
NUP42YDR192C BUD4P47136 1447 aa7.1□□□□□ -1.27
NUP42YDR192C SLD2P34252 453 aa7.09□□□□□ -1.27
NUP42YDR192C BDP1P46678 594 aa7.09□□□□□ -1.27
NUP42YDR192C PUF6Q04373 656 aaKnown RBP7.09□□□□□ -1.27
NUP42YDR192C ATG20Q07528 640 aa7.09□□□□□ -1.27
NUP42YDR192C GAS4Q08271 471 aa7.09□□□□□ -1.27
NUP42YDR192C TSC13Q99190 310 aa7.09□□□□□ -1.27
NUP42YDR192C THO2P53552 1597 aaKnown RBP7.08□□□□□ -1.28
NUP42YDR192C UBX7P38349 436 aa7.08□□□□□ -1.28
NUP42YDR192C RPP2BP02400 110 aaKnown RBP7.07□□□□□ -1.28
NUP42YDR192C ISR1Q06098 443 aaKnown RBP7.07□□□□□ -1.28
NUP42YDR192C EMW1P42842 904 aaKnown RBP7.06□□□□□ -1.28
NUP42YDR192C SSN2P38931 1420 aa7.06□□□□□ -1.28
NUP42YDR192C REV3P14284 1504 aa7.06□□□□□ -1.28
NUP42YDR192C XDJ1P39102 459 aa7.05□□□□□ -1.28
NUP42YDR192C RTT106P40161 455 aa7.05□□□□□ -1.28
NUP42YDR192C FRK1Q03002 865 aaPredicted RBP7.05□□□□□ -1.28
NUP42YDR192C AIM9P40053 627 aaKnown RBP7.04□□□□□ -1.28
NUP42YDR192C ACS2P52910 683 aaKnown RBP7.04□□□□□ -1.28
NUP42YDR192C HIR3P47171 1648 aa7.03□□□□□ -1.28
NUP42YDR192C SDH2P21801 266 aa7.03□□□□□ -1.28
NUP42YDR192C SSF1P38789 453 aaPredicted RBP7.03□□□□□ -1.28
NUP42YDR192C PUS5Q06244 254 aa7.03□□□□□ -1.28
NUP42YDR192C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.03□□□□□ -1.28not detected
NUP42YDR192C MIP1P15801 1254 aa7.02□□□□□ -1.29
NUP42YDR192C VAN1P23642 535 aa7.02□□□□□ -1.29
NUP42YDR192C FBP26P32604 452 aa7.02□□□□□ -1.29
NUP42YDR192C CST6P40535 587 aa7.02□□□□□ -1.29
NUP42YDR192C HED1Q03937 162 aa7.02□□□□□ -1.29
NUP42YDR192C TRS33Q99394 268 aa7.02□□□□□ -1.29
NUP42YDR192C PDI1P17967 522 aaKnown RBP7.01□□□□□ -1.29
NUP42YDR192C MRT4P33201 236 aaKnown RBP7.01□□□□□ -1.29
NUP42YDR192C MKS1P34072 584 aa7.01□□□□□ -1.29
NUP42YDR192C HAL5P38970 855 aaKnown RBP7.01□□□□□ -1.29
NUP42YDR192C ROM1P53046 1155 aa7.01□□□□□ -1.29
NUP42YDR192C HDA3Q06623 655 aa7.01□□□□□ -1.29
NUP42YDR192C HAT1Q12341 374 aa7.01□□□□□ -1.29
NUP42YDR192C SPT2P06843 333 aaPredicted RBP7□□□□□ -1.29
NUP42YDR192C AMS1P22855 1083 aa7□□□□□ -1.29
NUP42YDR192C TBS1P38114 1094 aa7□□□□□ -1.29
NUP42YDR192C APP1P53933 587 aa7□□□□□ -1.29
NUP42YDR192C ISU1Q03020 165 aa7□□□□□ -1.29
NUP42YDR192C CWC15Q03772 175 aaKnown RBP7□□□□□ -1.29
NUP42YDR192C SRS2P12954 1174 aa6.99□□□□□ -1.29
NUP42YDR192C UTR2P32623 467 aa6.99□□□□□ -1.29
NUP42YDR192C UBP1P25037 809 aa6.98□□□□□ -1.29
NUP42YDR192C CWH41P53008 833 aa6.98□□□□□ -1.29
NUP42YDR192C BPT1P14772 1559 aa6.98□□□□□ -1.29
NUP42YDR192C STM1P39015 273 aaKnown RBP6.97□□□□□ -1.29
NUP42YDR192C ITT1Q04638 464 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms