RNA–Protein interactions for RNA: YDR163W

CWC15, Transcript of Non-essential protein involved in pre-mRNA splicing, yeastyeast

Gene CWC15, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CWC15YDR163W CSE4P36012 229 aa11.39□□□□□ -0.59
CWC15YDR163W MST1P07236 462 aa11.38□□□□□ -0.59
CWC15YDR163W RPS24AP0CX31 135 aaKnown RBP11.38□□□□□ -0.59
CWC15YDR163W RPS24BP0CX32 135 aaKnown RBP11.38□□□□□ -0.59
CWC15YDR163W OPY1P38271 328 aa11.38□□□□□ -0.59
CWC15YDR163W YFR016CP43597 1233 aaKnown RBP11.38□□□□□ -0.59
CWC15YDR163W YMR196WQ04336 1088 aa11.38□□□□□ -0.59
CWC15YDR163W YOR238WQ08634 303 aa11.37□□□□□ -0.59
CWC15YDR163W YRF1-2P40105 1681 aa11.36□□□□□ -0.59
CWC15YDR163W DAL5P15365 543 aa11.36□□□□□ -0.59
CWC15YDR163W AKL1P38080 1108 aaKnown RBP11.36□□□□□ -0.59
CWC15YDR163W POL32P47110 350 aa11.36□□□□□ -0.59
CWC15YDR163W DPS1P04802 557 aaKnown RBP11.35□□□□□ -0.59
CWC15YDR163W GAS4Q08271 471 aa11.35□□□□□ -0.59
CWC15YDR163W YNL050CP53952 270 aa11.34□□□□□ -0.59
CWC15YDR163W EDE1P34216 1381 aa11.32□□□□□ -0.6
CWC15YDR163W MAM1P40065 302 aa11.32□□□□□ -0.6
CWC15YDR163W GYP7P48365 746 aa11.31□□□□□ -0.6
CWC15YDR163W TY4B-HP0C2J7 1802 aa11.3□□□□□ -0.6
CWC15YDR163W TY4B-JP47024 1803 aa11.3□□□□□ -0.6
CWC15YDR163W YLR271WQ06152 274 aa11.3□□□□□ -0.6
CWC15YDR163W YBL029C-AQ3E756 94 aa11.3□□□□□ -0.6
CWC15YDR163W DSD1P53095 428 aa11.29□□□□□ -0.6
CWC15YDR163W EAF7P53911 425 aaKnown RBP11.29□□□□□ -0.6
CWC15YDR163W BUB1P41695 1021 aaKnown RBP RIP-Chip data11.28□□□□□ -0.6not detected
CWC15YDR163W ZDS1P50111 915 aaKnown RBP11.28□□□□□ -0.6
CWC15YDR163W ECM16Q04217 1267 aaKnown RBP11.28□□□□□ -0.6
CWC15YDR163W NTH2P35172 780 aa11.27□□□□□ -0.61
CWC15YDR163W PUF6Q04373 656 aaKnown RBP11.27□□□□□ -0.61
CWC15YDR163W CTF4Q01454 927 aa11.26□□□□□ -0.61
CWC15YDR163W RRP5Q05022 1729 aaKnown RBP11.26□□□□□ -0.61
CWC15YDR163W YAP5P40574 245 aa11.25□□□□□ -0.61
CWC15YDR163W CLC1P17891 233 aa11.23□□□□□ -0.61
CWC15YDR163W RRT14P40470 206 aa11.23□□□□□ -0.61
CWC15YDR163W YIL177CP40434 1758 aa11.23□□□□□ -0.61
CWC15YDR163W YJL225CP40889 1758 aa11.23□□□□□ -0.61
CWC15YDR163W TRP5P00931 707 aaKnown RBP11.22□□□□□ -0.61
CWC15YDR163W SRT1Q03175 343 aa11.22□□□□□ -0.61
CWC15YDR163W LYS2P07702 1392 aa11.21□□□□□ -0.61
CWC15YDR163W YPP1P46951 817 aa11.21□□□□□ -0.61
CWC15YDR163W AOS1Q06624 347 aa11.21□□□□□ -0.61
CWC15YDR163W FKS3Q04952 1785 aa11.21□□□□□ -0.62
CWC15YDR163W RPS19AP07280 144 aaKnown RBP11.19□□□□□ -0.62
CWC15YDR163W RPS19BP07281 144 aaPredicted RBP11.19□□□□□ -0.62
CWC15YDR163W SNF7P39929 240 aaKnown RBP11.19□□□□□ -0.62
CWC15YDR163W THI12P42883 340 aa11.19□□□□□ -0.62
CWC15YDR163W THI5P43534 340 aa11.19□□□□□ -0.62
CWC15YDR163W THI11P47183 340 aa11.19□□□□□ -0.62
CWC15YDR163W THI13Q07748 340 aa11.19□□□□□ -0.62
CWC15YDR163W PCT1P13259 424 aa11.18□□□□□ -0.62
CWC15YDR163W UGA3P26370 528 aa11.18□□□□□ -0.62
CWC15YDR163W HSP104P31539 908 aaKnown RBP11.18□□□□□ -0.62
CWC15YDR163W URB1P34241 1764 aaKnown RBP11.18□□□□□ -0.62
CWC15YDR163W SLM3Q12093 417 aa11.17□□□□□ -0.62
CWC15YDR163W PRP5P21372 849 aaPredicted RBP11.16□□□□□ -0.62
CWC15YDR163W NSE3Q05541 303 aa11.16□□□□□ -0.62
CWC15YDR163W BMS1Q08965 1183 aaKnown RBP11.16□□□□□ -0.62
CWC15YDR163W VNX1P42839 908 aa11.15□□□□□ -0.62
CWC15YDR163W YNG2P38806 282 aaKnown RBP11.14□□□□□ -0.63
CWC15YDR163W CSI1Q04368 295 aa11.14□□□□□ -0.63
CWC15YDR163W LSP1Q12230 341 aaKnown RBP11.14□□□□□ -0.63
CWC15YDR163W RAD50P12753 1312 aa11.13□□□□□ -0.63
CWC15YDR163W VPS24P36095 224 aaKnown RBP11.13□□□□□ -0.63
CWC15YDR163W COQ4O13525 335 aa11.12□□□□□ -0.63
CWC15YDR163W ROX1P25042 368 aa11.12□□□□□ -0.63
CWC15YDR163W HGH1P48362 394 aaKnown RBP11.12□□□□□ -0.63
CWC15YDR163W KCC4P25389 1037 aa11.11□□□□□ -0.63
CWC15YDR163W SPO1P53541 631 aa11.11□□□□□ -0.63
CWC15YDR163W WSC3Q12215 556 aa11.11□□□□□ -0.63
CWC15YDR163W ILV3P39522 585 aaKnown RBP11.1□□□□□ -0.63
CWC15YDR163W YOL057WQ08225 711 aa11.1□□□□□ -0.63
CWC15YDR163W PRP45P28004 379 aaPredicted RBP11.09□□□□□ -0.63
CWC15YDR163W NKP2Q06162 153 aa11.09□□□□□ -0.63
CWC15YDR163W GCD7P32502 381 aaPredicted RBP11.08□□□□□ -0.64
CWC15YDR163W SSP1P38871 571 aa11.08□□□□□ -0.64
CWC15YDR163W MSB3P48566 633 aaPredicted RBP11.08□□□□□ -0.64
CWC15YDR163W YBR287WP38355 427 aa11.07□□□□□ -0.64
CWC15YDR163W NMD2P38798 1089 aaKnown RBP11.07□□□□□ -0.64
CWC15YDR163W NOP8Q08287 484 aaPredicted RBP11.07□□□□□ -0.64
CWC15YDR163W TCB1Q12466 1186 aa11.07□□□□□ -0.64
CWC15YDR163W ROM2P51862 1356 aaKnown RBP11.06□□□□□ -0.64
CWC15YDR163W CDC16P09798 840 aa11.06□□□□□ -0.64
CWC15YDR163W XKS1P42826 600 aa11.06□□□□□ -0.64
CWC15YDR163W SPP1Q03012 353 aa11.06□□□□□ -0.64
CWC15YDR163W NUP145P49687 1317 aa11.06□□□□□ -0.64
CWC15YDR163W RSF2P46974 1380 aa11.05□□□□□ -0.64
CWC15YDR163W MRM1P25270 412 aa11.05□□□□□ -0.64
CWC15YDR163W RCR1P38212 213 aa11.05□□□□□ -0.64
CWC15YDR163W GCR2Q01722 534 aa11.05□□□□□ -0.64
CWC15YDR163W YDR306CQ06640 478 aa11.05□□□□□ -0.64
CWC15YDR163W RFC1P38630 861 aaKnown RBP11.04□□□□□ -0.64
CWC15YDR163W INP54Q08227 384 aaKnown RBP11.04□□□□□ -0.64
CWC15YDR163W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.04□□□□□ -0.64not detected
CWC15YDR163W MRP7P12687 371 aa11.03□□□□□ -0.64
CWC15YDR163W MSP1P28737 362 aa11.03□□□□□ -0.64
CWC15YDR163W RAD24P32641 659 aa11.03□□□□□ -0.64
CWC15YDR163W GTT3P39996 337 aa11.03□□□□□ -0.64
CWC15YDR163W RLF2Q12495 606 aa11.03□□□□□ -0.64
CWC15YDR163W DLD1P32891 587 aa11.02□□□□□ -0.65
CWC15YDR163W BOI2P39969 1040 aa11.02□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 42.2 ms