RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C ALR1Q08269 859 aa6.82□□□□□ -1.32
SHU2YDR078C YDL206WQ12424 762 aa6.82□□□□□ -1.32
SHU2YDR078C IXR1P33417 597 aa6.81□□□□□ -1.32
SHU2YDR078C NUP85P46673 744 aa6.81□□□□□ -1.32
SHU2YDR078C YPR097WQ06839 1073 aa6.81□□□□□ -1.32
SHU2YDR078C TYW1Q08960 810 aaKnown RBP6.8□□□□□ -1.32
SHU2YDR078C PUS6P53294 404 aa6.79□□□□□ -1.32
SHU2YDR078C YMR196WQ04336 1088 aa6.79□□□□□ -1.32
SHU2YDR078C HPF1Q05164 967 aa6.79□□□□□ -1.32
SHU2YDR078C PKC1P24583 1151 aa6.78□□□□□ -1.32
SHU2YDR078C SCW11P53189 542 aa6.78□□□□□ -1.32
SHU2YDR078C TBF1Q02457 562 aa6.78□□□□□ -1.32
SHU2YDR078C TY1A-BLQ12266 440 aa6.78□□□□□ -1.32
SHU2YDR078C MIP1P15801 1254 aa6.76□□□□□ -1.33
SHU2YDR078C SCJ1P25303 377 aa6.76□□□□□ -1.33
SHU2YDR078C KTR1P27810 393 aaKnown RBP6.76□□□□□ -1.33
SHU2YDR078C TRM1P15565 570 aaKnown RBP6.75□□□□□ -1.33
SHU2YDR078C RTT106P40161 455 aa6.72□□□□□ -1.33
SHU2YDR078C BIM1P40013 344 aa6.71□□□□□ -1.34
SHU2YDR078C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
SHU2YDR078C GLN1P32288 370 aaKnown RBP6.7□□□□□ -1.34
SHU2YDR078C AAD14P42884 376 aa6.7□□□□□ -1.34
SHU2YDR078C YJL007CP47080 104 aa6.7□□□□□ -1.34
SHU2YDR078C HST2P53686 357 aa6.7□□□□□ -1.34
SHU2YDR078C ATG32P40458 529 aa6.69□□□□□ -1.34
SHU2YDR078C LSC2P53312 427 aa6.69□□□□□ -1.34
SHU2YDR078C ARG82P07250 355 aa6.68□□□□□ -1.34
SHU2YDR078C VAC17P25591 423 aa6.67□□□□□ -1.34
SHU2YDR078C YBL086CP38177 466 aa6.67□□□□□ -1.34
SHU2YDR078C YBL036CP38197 257 aa6.67□□□□□ -1.34
SHU2YDR078C UBP2Q01476 1272 aa6.67□□□□□ -1.34
SHU2YDR078C MMP1Q12372 583 aa6.67□□□□□ -1.34
SHU2YDR078C DLD1P32891 587 aa6.66□□□□□ -1.34
SHU2YDR078C YJR098CP47139 656 aa6.66□□□□□ -1.34
SHU2YDR078C RPL34BP40525 121 aaKnown RBP6.65□□□□□ -1.34
SHU2YDR078C ITT1Q04638 464 aa6.65□□□□□ -1.34
SHU2YDR078C PKH3Q03306 898 aaPredicted RBP6.64□□□□□ -1.35
SHU2YDR078C SUB2Q07478 446 aaKnown RBP6.64□□□□□ -1.35
SHU2YDR078C RAD59Q12223 238 aa6.64□□□□□ -1.35
SHU2YDR078C TCB1Q12466 1186 aa6.64□□□□□ -1.35
SHU2YDR078C TIF1P10081 395 aaKnown RBP6.63□□□□□ -1.35
SHU2YDR078C SSA1P10591 642 aaKnown RBP6.63□□□□□ -1.35
SHU2YDR078C ESS1P22696 170 aa6.63□□□□□ -1.35
SHU2YDR078C BIO2P32451 375 aa6.63□□□□□ -1.35
SHU2YDR078C CSE4P36012 229 aa6.63□□□□□ -1.35
SHU2YDR078C ROG3P43602 733 aa6.63□□□□□ -1.35
SHU2YDR078C ICP55P40051 511 aa6.62□□□□□ -1.35
SHU2YDR078C APP1P53933 587 aa6.62□□□□□ -1.35
SHU2YDR078C YPR204WQ08995 1032 aa6.62□□□□□ -1.35
SHU2YDR078C TY1A-MR1Q04215 440 aa6.61□□□□□ -1.35
SHU2YDR078C CCP1P00431 361 aa6.6□□□□□ -1.35
SHU2YDR078C SSA4P22202 642 aaKnown RBP6.6□□□□□ -1.35
SHU2YDR078C YJU3P28321 313 aa6.6□□□□□ -1.35
SHU2YDR078C GEF1P37020 779 aa6.6□□□□□ -1.35
SHU2YDR078C OSH7P38755 437 aa6.6□□□□□ -1.35
SHU2YDR078C EMW1P42842 904 aaKnown RBP6.59□□□□□ -1.35
SHU2YDR078C ARG8P18544 423 aa6.58□□□□□ -1.36
SHU2YDR078C DPH6Q12429 685 aa6.58□□□□□ -1.36
SHU2YDR078C RSC30P38781 883 aa6.57□□□□□ -1.36
SHU2YDR078C LSB3P43603 459 aaKnown RBP6.57□□□□□ -1.36
SHU2YDR078C PUS1Q12211 544 aaKnown RBP6.57□□□□□ -1.36
SHU2YDR078C RTG2P32608 588 aaKnown RBP6.56□□□□□ -1.36
SHU2YDR078C YNL108CP53929 270 aa6.56□□□□□ -1.36
SHU2YDR078C SUP45P12385 437 aaKnown RBP6.55□□□□□ -1.36
SHU2YDR078C SPT5P27692 1063 aaKnown RBP6.55□□□□□ -1.36
SHU2YDR078C MDJ1P35191 511 aa6.55□□□□□ -1.36
SHU2YDR078C TTI1P36097 1038 aa6.55□□□□□ -1.36
SHU2YDR078C CPS1P27614 576 aa6.54□□□□□ -1.36
SHU2YDR078C MAK16P10962 306 aaPredicted RBP6.53□□□□□ -1.36
SHU2YDR078C YML020WQ03722 664 aa6.53□□□□□ -1.36
SHU2YDR078C LYS5P50113 272 aa6.52□□□□□ -1.37
SHU2YDR078C DFG5Q05031 458 aa6.52□□□□□ -1.37
SHU2YDR078C PHM7Q12252 991 aa6.52□□□□□ -1.37
SHU2YDR078C ENO2P00925 437 aaKnown RBP6.51□□□□□ -1.37
SHU2YDR078C MKS1P34072 584 aa6.51□□□□□ -1.37
SHU2YDR078C FIG4P42837 879 aa6.51□□□□□ -1.37
SHU2YDR078C JJJ3P47138 172 aa6.51□□□□□ -1.37
SHU2YDR078C NOP8Q08287 484 aaPredicted RBP6.51□□□□□ -1.37
SHU2YDR078C YDJ1P25491 409 aaKnown RBP6.5□□□□□ -1.37
SHU2YDR078C SLX8P40072 274 aa6.5□□□□□ -1.37
SHU2YDR078C NAM8Q00539 523 aaKnown RBP6.5□□□□□ -1.37
SHU2YDR078C ENO1P00924 437 aaKnown RBP6.49□□□□□ -1.37
SHU2YDR078C SIS2P36024 562 aa6.49□□□□□ -1.37
SHU2YDR078C CDC19P00549 500 aaKnown RBP6.48□□□□□ -1.37
SHU2YDR078C RIM21P48565 533 aa6.48□□□□□ -1.37
SHU2YDR078C MRX10Q05648 414 aa6.48□□□□□ -1.37
SHU2YDR078C NOB1Q08444 459 aaKnown RBP6.48□□□□□ -1.37
SHU2YDR078C NAF1P53919 492 aaKnown RBP6.47□□□□□ -1.37
SHU2YDR078C YPP1P46951 817 aa6.45□□□□□ -1.38
SHU2YDR078C NSG2P53898 299 aa6.45□□□□□ -1.38
SHU2YDR078C RPL34AP87262 121 aaPredicted RBP6.44□□□□□ -1.38
SHU2YDR078C BDS1Q08347 646 aa6.44□□□□□ -1.38
SHU2YDR078C PUP1P25043 261 aa6.43□□□□□ -1.38
SHU2YDR078C YFL066CP43538 392 aa6.43□□□□□ -1.38
SHU2YDR078C MCM16Q12262 181 aa6.43□□□□□ -1.38
SHU2YDR078C FBP26P32604 452 aa6.42□□□□□ -1.38
SHU2YDR078C STE6P12866 1290 aa6.41□□□□□ -1.38
SHU2YDR078C CDC3P32457 520 aaKnown RBP6.41□□□□□ -1.38
SHU2YDR078C YML083CQ04526 418 aa6.41□□□□□ -1.38
SHU2YDR078C YPR084WQ06821 456 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms