RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W YMR1P47147 688 aaKnown RBP RIP-Chip data7.02□□□□□ -1.29not detected
VMS1YDR049W ALD3P54114 506 aa7.02□□□□□ -1.29
VMS1YDR049W YOL036WQ08206 761 aa7.02□□□□□ -1.29
VMS1YDR049W ERP4Q12450 207 aa7.02□□□□□ -1.29
VMS1YDR049W BLI1P35727 113 aa7.01□□□□□ -1.29
VMS1YDR049W FUI1P38196 639 aa7.01□□□□□ -1.29
VMS1YDR049W PPX1P38698 397 aa7.01□□□□□ -1.29
VMS1YDR049W MEH1Q02205 184 aa7.01□□□□□ -1.29
VMS1YDR049W SVL3Q03088 825 aaKnown RBP7.01□□□□□ -1.29
VMS1YDR049W NFU1P32860 256 aa7□□□□□ -1.29
VMS1YDR049W TGL4P36165 910 aa7□□□□□ -1.29
VMS1YDR049W BUD6P41697 788 aa7□□□□□ -1.29
VMS1YDR049W TRX2P22803 104 aaKnown RBP7□□□□□ -1.29
VMS1YDR049W RTG3P38165 486 aa7□□□□□ -1.29
VMS1YDR049W YJR142WP47173 342 aa7□□□□□ -1.29
VMS1YDR049W YMR196WQ04336 1088 aa7□□□□□ -1.29
VMS1YDR049W NCR1Q12200 1170 aa7□□□□□ -1.29
VMS1YDR049W TRP5P00931 707 aaKnown RBP6.99□□□□□ -1.29
VMS1YDR049W THS1P04801 734 aaKnown RBP6.99□□□□□ -1.29
VMS1YDR049W RPN12P32496 274 aa6.99□□□□□ -1.29
VMS1YDR049W TRL1P09880 827 aaKnown RBP6.98□□□□□ -1.29
VMS1YDR049W DBP1P24784 617 aaKnown RBP6.98□□□□□ -1.29
VMS1YDR049W MNN1P39106 762 aa6.98□□□□□ -1.29
VMS1YDR049W UBP12P39538 1254 aa6.98□□□□□ -1.29
VMS1YDR049W ENO1P00924 437 aaKnown RBP6.98□□□□□ -1.29
VMS1YDR049W SUP45P12385 437 aaKnown RBP6.98□□□□□ -1.29
VMS1YDR049W MET1P36150 593 aa6.98□□□□□ -1.29
VMS1YDR049W YJL049WP47048 450 aa6.98□□□□□ -1.29
VMS1YDR049W YJR107WP47145 328 aa6.98□□□□□ -1.29
VMS1YDR049W ALD6P54115 500 aaKnown RBP6.98□□□□□ -1.29
VMS1YDR049W PSK2Q08217 1101 aa6.98□□□□□ -1.29
VMS1YDR049W DPB3P27344 201 aa6.97□□□□□ -1.29
VMS1YDR049W THI12P42883 340 aa6.97□□□□□ -1.29
VMS1YDR049W THI5P43534 340 aa6.97□□□□□ -1.29
VMS1YDR049W THI11P47183 340 aa6.97□□□□□ -1.29
VMS1YDR049W THI13Q07748 340 aa6.97□□□□□ -1.29
VMS1YDR049W STI1P15705 589 aaKnown RBP RIP-Chip data6.96□□□□□ -1.29not detected
VMS1YDR049W OPI1P21957 404 aa6.96□□□□□ -1.29
VMS1YDR049W CSE4P36012 229 aa6.96□□□□□ -1.29
VMS1YDR049W PBP2P38151 413 aaKnown RBP RIP-Chip data6.96□□□□□ -1.29not detected
VMS1YDR049W MGE1P38523 228 aa6.96□□□□□ -1.29
VMS1YDR049W RTT106P40161 455 aa6.96□□□□□ -1.29
VMS1YDR049W MDJ2P42834 146 aa6.96□□□□□ -1.29
VMS1YDR049W ITC1P53125 1264 aa6.96□□□□□ -1.29
VMS1YDR049W YNL035CP53962 389 aaKnown RBP6.96□□□□□ -1.29
VMS1YDR049W SEC61P32915 480 aa6.96□□□□□ -1.3
VMS1YDR049W VPS29P38759 282 aa6.96□□□□□ -1.3
VMS1YDR049W MRX10Q05648 414 aa6.96□□□□□ -1.3
VMS1YDR049W TYW1Q08960 810 aaKnown RBP6.96□□□□□ -1.3
VMS1YDR049W GLO3P38682 493 aaKnown RBP6.94□□□□□ -1.3
VMS1YDR049W YEN1P40028 759 aa6.94□□□□□ -1.3
VMS1YDR049W YFR006WP43590 535 aa6.94□□□□□ -1.3
VMS1YDR049W UTP14Q04500 899 aaKnown RBP6.94□□□□□ -1.3
VMS1YDR049W KAR5Q04746 504 aa6.94□□□□□ -1.3
VMS1YDR049W MNL2Q12205 849 aa6.94□□□□□ -1.3
VMS1YDR049W PSE1P32337 1089 aaKnown RBP6.94□□□□□ -1.3
VMS1YDR049W GRS1P38088 690 aaKnown RBP6.94□□□□□ -1.3
VMS1YDR049W MAL31P38156 614 aa6.94□□□□□ -1.3
VMS1YDR049W CDC53Q12018 815 aaKnown RBP6.94□□□□□ -1.3
VMS1YDR049W SNU66Q12420 587 aaPredicted RBP6.94□□□□□ -1.3
VMS1YDR049W ATG1P53104 897 aa6.93□□□□□ -1.3
VMS1YDR049W ENO2P00925 437 aaKnown RBP6.92□□□□□ -1.3
VMS1YDR049W MET6P05694 767 aaKnown RBP6.92□□□□□ -1.3
VMS1YDR049W VMA1P17255 1071 aaKnown RBP6.92□□□□□ -1.3
VMS1YDR049W MSH4P40965 878 aaPredicted RBP6.92□□□□□ -1.3
VMS1YDR049W VPS16Q03308 798 aa6.92□□□□□ -1.3
VMS1YDR049W TLG1Q03322 224 aa6.92□□□□□ -1.3
VMS1YDR049W VMS1Q04311 632 aaKnown RBP6.92□□□□□ -1.3
VMS1YDR049W YOR131CQ12486 218 aa6.92□□□□□ -1.3
VMS1YDR049W TY4B-PA0A0B7P3V8 1104 aa6.91□□□□□ -1.3
VMS1YDR049W SAM3Q08986 587 aa6.91□□□□□ -1.3
VMS1YDR049W WRS1Q12109 432 aaKnown RBP6.91□□□□□ -1.3
VMS1YDR049W TY4A-HQ6Q5P6 413 aa6.91□□□□□ -1.3
VMS1YDR049W DEF1P35732 738 aaKnown RBP6.9□□□□□ -1.3
VMS1YDR049W FAF1P40546 346 aaPredicted RBP6.9□□□□□ -1.3
VMS1YDR049W YDR090CQ03193 310 aa6.9□□□□□ -1.3
VMS1YDR049W BDF2Q07442 638 aa6.9□□□□□ -1.3
VMS1YDR049W PIN2Q12057 282 aa6.9□□□□□ -1.3
VMS1YDR049W DPS1P04802 557 aaKnown RBP6.9□□□□□ -1.31
VMS1YDR049W NMD3P38861 518 aaKnown RBP6.9□□□□□ -1.31
VMS1YDR049W MAD1P40957 749 aa6.9□□□□□ -1.31
VMS1YDR049W RIM21P48565 533 aa6.9□□□□□ -1.31
VMS1YDR049W ECM23Q02710 187 aa6.9□□□□□ -1.31
VMS1YDR049W CAB3P36076 571 aa6.89□□□□□ -1.31
VMS1YDR049W TPS3P38426 1054 aaKnown RBP6.89□□□□□ -1.31
VMS1YDR049W STS1P38637 319 aa6.89□□□□□ -1.31
VMS1YDR049W DAK2P43550 591 aa6.89□□□□□ -1.31
VMS1YDR049W EMP47P43555 445 aa6.89□□□□□ -1.31
VMS1YDR049W FOL1P53848 824 aa6.89□□□□□ -1.31
VMS1YDR049W MTC5Q03897 1148 aa6.89□□□□□ -1.31
VMS1YDR049W YDJ1P25491 409 aaKnown RBP6.88□□□□□ -1.31
VMS1YDR049W MRC1P25588 1096 aa6.88□□□□□ -1.31
VMS1YDR049W BDP1P46678 594 aa6.88□□□□□ -1.31
VMS1YDR049W MDM1Q01846 1127 aa6.88□□□□□ -1.31
VMS1YDR049W RAD59Q12223 238 aa6.88□□□□□ -1.31
VMS1YDR049W RAD27P26793 382 aa6.87□□□□□ -1.31
VMS1YDR049W EDS1P38073 919 aa6.87□□□□□ -1.31
VMS1YDR049W PAF1P38351 445 aa6.87□□□□□ -1.31
VMS1YDR049W FYV10P40492 516 aa6.87□□□□□ -1.31
VMS1YDR049W TEA1P47988 759 aa6.87□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms