RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR034C-DYDR034C-D YPP1P46951 817 aa3.91□□□□□ -1.78
YDR034C-DYDR034C-D TFB4Q12004 338 aa3.91□□□□□ -1.78
YDR034C-DYDR034C-D PHO4P07270 312 aaKnown RBP3.91□□□□□ -1.78
YDR034C-DYDR034C-D RTF1P53064 558 aa3.91□□□□□ -1.78
YDR034C-DYDR034C-D SPR28Q04921 423 aa3.91□□□□□ -1.78
YDR034C-DYDR034C-D FRA1Q07825 749 aa3.91□□□□□ -1.78
YDR034C-DYDR034C-D GRX4P32642 244 aa3.91□□□□□ -1.78
YDR034C-DYDR034C-D MTO1P53070 669 aa3.91□□□□□ -1.78
YDR034C-DYDR034C-D ALD6P54115 500 aaKnown RBP3.91□□□□□ -1.78
YDR034C-DYDR034C-D RRP14P36080 434 aaKnown RBP3.9□□□□□ -1.78
YDR034C-DYDR034C-D TOS4Q06266 489 aa3.9□□□□□ -1.78
YDR034C-DYDR034C-D ERF2Q06551 359 aa3.9□□□□□ -1.78
YDR034C-DYDR034C-D MST1P07236 462 aa3.9□□□□□ -1.79
YDR034C-DYDR034C-D SLY41P22215 453 aa3.9□□□□□ -1.79
YDR034C-DYDR034C-D TOM20P35180 183 aa3.9□□□□□ -1.79
YDR034C-DYDR034C-D QDR1P40475 563 aa3.9□□□□□ -1.79
YDR034C-DYDR034C-D EMP47P43555 445 aa3.9□□□□□ -1.79
YDR034C-DYDR034C-D AGE1Q04412 482 aa3.9□□□□□ -1.79
YDR034C-DYDR034C-D DAN4P47179 1161 aa3.9□□□□□ -1.79
YDR034C-DYDR034C-D NSE3Q05541 303 aa3.9□□□□□ -1.79
YDR034C-DYDR034C-D PHO87P25360 923 aa3.9□□□□□ -1.79
YDR034C-DYDR034C-D YNL115CP53925 644 aa3.9□□□□□ -1.79
YDR034C-DYDR034C-D LSO1Q3E827 93 aa3.9□□□□□ -1.79
YDR034C-DYDR034C-D OSW7P43611 510 aa3.89□□□□□ -1.79
YDR034C-DYDR034C-D TUM1Q08686 304 aaKnown RBP3.89□□□□□ -1.79
YDR034C-DYDR034C-D SRS2P12954 1174 aa3.89□□□□□ -1.79
YDR034C-DYDR034C-D TUB4P53378 473 aa3.89□□□□□ -1.79
YDR034C-DYDR034C-D MCM2P29469 868 aa3.88□□□□□ -1.79
YDR034C-DYDR034C-D DAK2P43550 591 aa3.88□□□□□ -1.79
YDR034C-DYDR034C-D BDF2Q07442 638 aa3.88□□□□□ -1.79
YDR034C-DYDR034C-D PDR1P12383 1068 aa3.88□□□□□ -1.79
YDR034C-DYDR034C-D MIP1P15801 1254 aa3.88□□□□□ -1.79
YDR034C-DYDR034C-D PMC1P38929 1173 aaPredicted RBP3.88□□□□□ -1.79
YDR034C-DYDR034C-D BUD21Q08492 214 aaPredicted RBP3.88□□□□□ -1.79
YDR034C-DYDR034C-D PBP2P38151 413 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
YDR034C-DYDR034C-D FPR3P38911 411 aaKnown RBP3.87□□□□□ -1.79
YDR034C-DYDR034C-D APC11Q12157 165 aa3.87□□□□□ -1.79
YDR034C-DYDR034C-D DCW1P36091 449 aa3.86□□□□□ -1.79
YDR034C-DYDR034C-D FIG4P42837 879 aa3.86□□□□□ -1.79
YDR034C-DYDR034C-D GLO3P38682 493 aaKnown RBP3.86□□□□□ -1.79
YDR034C-DYDR034C-D HAL5P38970 855 aaKnown RBP3.86□□□□□ -1.79
YDR034C-DYDR034C-D YOL036WQ08206 761 aa3.86□□□□□ -1.79
YDR034C-DYDR034C-D YRB30P53107 440 aaPredicted RBP3.86□□□□□ -1.79
YDR034C-DYDR034C-D TSR4P25040 408 aa3.86□□□□□ -1.79
YDR034C-DYDR034C-D THI12P42883 340 aa3.86□□□□□ -1.79
YDR034C-DYDR034C-D THI5P43534 340 aa3.86□□□□□ -1.79
YDR034C-DYDR034C-D THI11P47183 340 aa3.86□□□□□ -1.79
YDR034C-DYDR034C-D PUS6P53294 404 aa3.86□□□□□ -1.79
YDR034C-DYDR034C-D THI13Q07748 340 aa3.86□□□□□ -1.79
YDR034C-DYDR034C-D UTP13Q05946 817 aaKnown RBP3.85□□□□□ -1.79
YDR034C-DYDR034C-D TSC13Q99190 310 aa3.85□□□□□ -1.79
YDR034C-DYDR034C-D HAP4P14064 554 aa3.85□□□□□ -1.79
YDR034C-DYDR034C-D MGE1P38523 228 aa3.85□□□□□ -1.79
YDR034C-DYDR034C-D TRS120Q04183 1289 aa3.85□□□□□ -1.79
YDR034C-DYDR034C-D GAS4Q08271 471 aa3.85□□□□□ -1.79
YDR034C-DYDR034C-D YHR020WP38708 688 aaKnown RBP3.85□□□□□ -1.79
YDR034C-DYDR034C-D SRP40P32583 406 aaPredicted RBP3.85□□□□□ -1.79
YDR034C-DYDR034C-D YJR142WP47173 342 aa3.85□□□□□ -1.79
YDR034C-DYDR034C-D SSB1P11484 613 aaKnown RBP3.84□□□□□ -1.79
YDR034C-DYDR034C-D PPG1P32838 368 aa3.84□□□□□ -1.79
YDR034C-DYDR034C-D YKL091CP33324 310 aaKnown RBP3.84□□□□□ -1.79
YDR034C-DYDR034C-D SSB2P40150 613 aaKnown RBP3.84□□□□□ -1.79
YDR034C-DYDR034C-D YJL049WP47048 450 aa3.84□□□□□ -1.79
YDR034C-DYDR034C-D KEX2P13134 814 aa3.84□□□□□ -1.79
YDR034C-DYDR034C-D UBP12P39538 1254 aa3.84□□□□□ -1.79
YDR034C-DYDR034C-D UBP1P25037 809 aa3.84□□□□□ -1.8
YDR034C-DYDR034C-D RPT1P33299 467 aaKnown RBP3.84□□□□□ -1.8
YDR034C-DYDR034C-D UBP3Q01477 912 aaKnown RBP RIP-Chip data3.84□□□□□ -1.8not detected
YDR034C-DYDR034C-D GIN4Q12263 1142 aa3.84□□□□□ -1.8
YDR034C-DYDR034C-D FUR4P05316 633 aaKnown RBP3.84□□□□□ -1.8
YDR034C-DYDR034C-D STI1P15705 589 aaKnown RBP RIP-Chip data3.84□□□□□ -1.8not detected
YDR034C-DYDR034C-D TPM2P40414 161 aa3.84□□□□□ -1.8
YDR034C-DYDR034C-D SVL3Q03088 825 aaKnown RBP3.84□□□□□ -1.8
YDR034C-DYDR034C-D CYC8P14922 966 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D SEC2P17065 759 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D YEL023CP39992 682 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D PUN1Q06991 263 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D RMD1Q03441 430 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D YOL057WQ08225 711 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-DR4O74302 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-HP0C2I4 478 aaKnown RBP3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-AP0CX57 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-PR1P0CX58 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-ORP0CX59 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-PR2P0CX60 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-DR5P0CX65 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-ER2P0CX66 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-GR3P0CX67 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-LR1P0CX68 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-MR2P0CX69 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D SSD1P24276 1250 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
YDR034C-DYDR034C-D DUT1P33317 147 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TFG1P41895 735 aaPredicted RBP3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-JR2P47099 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-DR1Q03856 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-ML1Q04706 440 aaKnown RBP3.83□□□□□ -1.8
YDR034C-DYDR034C-D ENV9Q08651 330 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-BRQ12217 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-NL2Q12470 440 aa3.83□□□□□ -1.8
YDR034C-DYDR034C-D TY1A-GR2Q12485 440 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 64.7 ms