RNA–Protein interactions for RNA: YDL230W

PTP1, Transcript of Phosphotyrosine-specific protein phosphatase, yeastyeast

Gene PTP1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTP1YDL230W BMS1Q08965 1183 aaKnown RBP15.21■□□□□ 0.03
PTP1YDL230W TCB1Q12466 1186 aa15.2■□□□□ 0.02
PTP1YDL230W COQ4O13525 335 aa15.19■□□□□ 0.02
PTP1YDL230W ILV3P39522 585 aaKnown RBP15.17■□□□□ 0.02
PTP1YDL230W EDE1P34216 1381 aa15.16■□□□□ 0.02
PTP1YDL230W CTF4Q01454 927 aa15.16■□□□□ 0.02
PTP1YDL230W CSI1Q04368 295 aa15.16■□□□□ 0.02
PTP1YDL230W OPY1P38271 328 aa15.14■□□□□ 0.01
PTP1YDL230W YPP1P46951 817 aa15.14■□□□□ 0.01
PTP1YDL230W NUP145P49687 1317 aa15.13■□□□□ 0.01
PTP1YDL230W REB1P21538 810 aa15.11■□□□□ 0.01
PTP1YDL230W YFR016CP43597 1233 aaKnown RBP15.11■□□□□ 0.01
PTP1YDL230W INP54Q08227 384 aaKnown RBP15.11■□□□□ 0.01
PTP1YDL230W RSF2P46974 1380 aa15.11■□□□□ 0.01
PTP1YDL230W KCC4P25389 1037 aa15.1■□□□□ 0.01
PTP1YDL230W UGA3P26370 528 aa15.1■□□□□ 0.01
PTP1YDL230W YGR122WP53272 402 aa15.1■□□□□ 0.01
PTP1YDL230W NSE3Q05541 303 aa15.1■□□□□ 0.01
PTP1YDL230W ENT1Q12518 454 aa15.1■□□□□ 0.01
PTP1YDL230W YNG2P38806 282 aaKnown RBP15.09■□□□□ 0.01
PTP1YDL230W YRF1-3P0CX14 1859 aa15.09■□□□□ 0.01
PTP1YDL230W YRF1-7P0CX15 1859 aa15.09■□□□□ 0.01
PTP1YDL230W YRF1-6P53819 1859 aa15.09■□□□□ 0.01
PTP1YDL230W IME2P32581 645 aa15.08■□□□□ 0
PTP1YDL230W SPO1P53541 631 aa15.07■□□□□ 0
PTP1YDL230W RAD4P14736 754 aa15.06■□□□□ 0
PTP1YDL230W RAD24P32641 659 aa15.06■□□□□ 0
PTP1YDL230W YIR014WP40570 242 aa15.06■□□□□ 0
PTP1YDL230W YOL057WQ08225 711 aa15.05■□□□□ -0
PTP1YDL230W ALE1Q08548 619 aa15.05■□□□□ -0
PTP1YDL230W RPS19AP07280 144 aaKnown RBP15.03■□□□□ -0
PTP1YDL230W RPS19BP07281 144 aaPredicted RBP15.03■□□□□ -0
PTP1YDL230W IES2P40154 320 aa15.03■□□□□ -0
PTP1YDL230W ADE16P54113 591 aaKnown RBP15.03■□□□□ -0
PTP1YDL230W LYS2P07702 1392 aa15.02■□□□□ -0
PTP1YDL230W ZDS2P54786 942 aa15.02■□□□□ -0
PTP1YDL230W NOP8Q08287 484 aaPredicted RBP15.02■□□□□ -0
PTP1YDL230W ENV9Q08651 330 aa15.02■□□□□ -0
PTP1YDL230W MRP7P12687 371 aa15.01□□□□□ -0.01
PTP1YDL230W APP1P53933 587 aa15.01□□□□□ -0.01
PTP1YDL230W OSM1P21375 501 aaKnown RBP15□□□□□ -0.01
PTP1YDL230W SWC3P31376 625 aa14.99□□□□□ -0.01
PTP1YDL230W NMD2P38798 1089 aaKnown RBP14.98□□□□□ -0.01
PTP1YDL230W NKP2Q06162 153 aa14.98□□□□□ -0.01
PTP1YDL230W YDR306CQ06640 478 aa14.98□□□□□ -0.01
PTP1YDL230W FRK1Q03002 865 aaPredicted RBP14.97□□□□□ -0.01
PTP1YDL230W YKL133CP36066 463 aa14.96□□□□□ -0.01
PTP1YDL230W MEC3Q02574 474 aa14.96□□□□□ -0.01
PTP1YDL230W RFC1P38630 861 aaKnown RBP14.95□□□□□ -0.02
PTP1YDL230W ECM16Q04217 1267 aaKnown RBP14.94□□□□□ -0.02
PTP1YDL230W BOI2P39969 1040 aa14.93□□□□□ -0.02
PTP1YDL230W ATG13Q06628 738 aa14.92□□□□□ -0.02
PTP1YDL230W PCT1P13259 424 aa14.91□□□□□ -0.02
PTP1YDL230W NUP133P36161 1157 aa14.91□□□□□ -0.02
PTP1YDL230W RAD50P12753 1312 aa14.91□□□□□ -0.02
PTP1YDL230W GCD7P32502 381 aaPredicted RBP14.9□□□□□ -0.02
PTP1YDL230W YBP2P53169 641 aa14.89□□□□□ -0.03
PTP1YDL230W SWI1P09547 1314 aa14.89□□□□□ -0.03
PTP1YDL230W EAF7P53911 425 aaKnown RBP14.88□□□□□ -0.03
PTP1YDL230W DNM1P54861 757 aa14.88□□□□□ -0.03
PTP1YDL230W VPS64Q03944 604 aa14.88□□□□□ -0.03
PTP1YDL230W YAH1Q12184 172 aaKnown RBP14.88□□□□□ -0.03
PTP1YDL230W RLF2Q12495 606 aa14.88□□□□□ -0.03
PTP1YDL230W CST6P40535 587 aa14.87□□□□□ -0.03
PTP1YDL230W RMT2Q03305 412 aa14.87□□□□□ -0.03
PTP1YDL230W IMH1Q06704 911 aaKnown RBP14.87□□□□□ -0.03
PTP1YDL230W BDP1P46678 594 aa14.85□□□□□ -0.03
PTP1YDL230W DLD1P32891 587 aa14.84□□□□□ -0.03
PTP1YDL230W APL2P36000 726 aaPredicted RBP14.84□□□□□ -0.03
PTP1YDL230W BRN1P38170 754 aa14.84□□□□□ -0.03
PTP1YDL230W TUM1Q08686 304 aaKnown RBP14.84□□□□□ -0.03
PTP1YDL230W NOP53Q12080 455 aaKnown RBP14.83□□□□□ -0.04
PTP1YDL230W RIM15P43565 1770 aa14.83□□□□□ -0.04
PTP1YDL230W DJP1P40564 432 aa14.82□□□□□ -0.04
PTP1YDL230W GCR2Q01722 534 aa14.82□□□□□ -0.04
PTP1YDL230W COBP00163 385 aa14.81□□□□□ -0.04
PTP1YDL230W LPD1P09624 499 aaKnown RBP14.81□□□□□ -0.04
PTP1YDL230W CDC16P09798 840 aa14.81□□□□□ -0.04
PTP1YDL230W YJR008WP47085 338 aa14.81□□□□□ -0.04
PTP1YDL230W DOT5P40553 215 aa14.8□□□□□ -0.04
PTP1YDL230W HGH1P48362 394 aaKnown RBP14.8□□□□□ -0.04
PTP1YDL230W FOX2Q02207 900 aaKnown RBP14.8□□□□□ -0.04
PTP1YDL230W ROM2P51862 1356 aaKnown RBP14.8□□□□□ -0.04
PTP1YDL230W UBP12P39538 1254 aa14.79□□□□□ -0.04
PTP1YDL230W HXT13P39924 564 aa14.79□□□□□ -0.04
PTP1YDL230W CLC1P17891 233 aa14.78□□□□□ -0.04
PTP1YDL230W HXT17P53631 564 aa14.78□□□□□ -0.04
PTP1YDL230W HXT10P43581 546 aa14.77□□□□□ -0.05
PTP1YDL230W YPR204WQ08995 1032 aa14.77□□□□□ -0.05
PTP1YDL230W RMD1Q03441 430 aa14.76□□□□□ -0.05
PTP1YDL230W SSP2Q08646 371 aa14.76□□□□□ -0.05
PTP1YDL230W VAS1P07806 1104 aaKnown RBP14.75□□□□□ -0.05
PTP1YDL230W ARG8P18544 423 aa14.74□□□□□ -0.05
PTP1YDL230W YKR075CP36155 307 aa14.74□□□□□ -0.05
PTP1YDL230W SNF7P39929 240 aaKnown RBP14.74□□□□□ -0.05
PTP1YDL230W DCD1P06773 312 aa14.73□□□□□ -0.05
PTP1YDL230W VPS24P36095 224 aaKnown RBP14.73□□□□□ -0.05
PTP1YDL230W FCP1Q03254 732 aa14.72□□□□□ -0.05
PTP1YDL230W DUR1,2P32528 1835 aaKnown RBP14.71□□□□□ -0.05
PTP1YDL230W SRS2P12954 1174 aa14.71□□□□□ -0.05
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms