RNA–Protein interactions for RNA: YDL139C

SCM3, Transcript of Nonhistone component of centromeric chromatin, yeastyeast

Gene SCM3, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCM3YDL139C TY1A-DR4O74302 440 aa7.76□□□□□ -1.17
SCM3YDL139C RAS1P01119 309 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-HP0C2I4 478 aaKnown RBP7.76□□□□□ -1.17
SCM3YDL139C TY1A-AP0CX57 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-PR1P0CX58 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-ORP0CX59 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-PR2P0CX60 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-DR5P0CX65 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-ER2P0CX66 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-GR3P0CX67 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-LR1P0CX68 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-MR2P0CX69 440 aa7.76□□□□□ -1.17
SCM3YDL139C SDH2P21801 266 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-JR2P47099 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-DR1Q03856 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-ML1Q04706 440 aaKnown RBP7.76□□□□□ -1.17
SCM3YDL139C TY1A-BRQ12217 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-NL2Q12470 440 aa7.76□□□□□ -1.17
SCM3YDL139C TY1A-GR2Q12485 440 aa7.76□□□□□ -1.17
SCM3YDL139C SPO14P36126 1683 aa7.76□□□□□ -1.17
SCM3YDL139C KEX2P13134 814 aa7.75□□□□□ -1.17
SCM3YDL139C ERF2Q06551 359 aa7.75□□□□□ -1.17
SCM3YDL139C SEC2P17065 759 aa7.74□□□□□ -1.17
SCM3YDL139C NUP170P38181 1502 aa7.73□□□□□ -1.17
SCM3YDL139C GEA1P47102 1408 aaPredicted RBP7.72□□□□□ -1.17
SCM3YDL139C CLB5P30283 435 aa7.72□□□□□ -1.17
SCM3YDL139C TEA1P47988 759 aa7.72□□□□□ -1.17
SCM3YDL139C YNR021WP53723 404 aaKnown RBP7.71□□□□□ -1.18
SCM3YDL139C NUP159P40477 1460 aa7.7□□□□□ -1.18
SCM3YDL139C GDB1Q06625 1536 aa7.7□□□□□ -1.18
SCM3YDL139C AMS1P22855 1083 aa7.7□□□□□ -1.18
SCM3YDL139C MRF1P30775 413 aaPredicted RBP7.69□□□□□ -1.18
SCM3YDL139C SPT16P32558 1035 aaKnown RBP7.69□□□□□ -1.18
SCM3YDL139C GLC3P32775 704 aa7.69□□□□□ -1.18
SCM3YDL139C BUD3P25558 1636 aa7.69□□□□□ -1.18
SCM3YDL139C RRN7P40992 514 aa7.68□□□□□ -1.18
SCM3YDL139C DMA2P53924 522 aa7.67□□□□□ -1.18
SCM3YDL139C YEL077CQ3E7X8 1277 aa7.67□□□□□ -1.18
SCM3YDL139C SSM4P40318 1319 aa7.67□□□□□ -1.18
SCM3YDL139C NIS1P53939 407 aa7.66□□□□□ -1.18
SCM3YDL139C ERG12P07277 443 aa7.65□□□□□ -1.18
SCM3YDL139C KIN1P13185 1064 aa7.65□□□□□ -1.18
SCM3YDL139C ARO1P08566 1588 aaKnown RBP7.64□□□□□ -1.19
SCM3YDL139C ATF2P53296 535 aa7.64□□□□□ -1.19
SCM3YDL139C SRC1Q03707 834 aa7.64□□□□□ -1.19
SCM3YDL139C PAT1P25644 796 aaKnown RBP7.62□□□□□ -1.19
SCM3YDL139C YNL115CP53925 644 aa7.62□□□□□ -1.19
SCM3YDL139C GEA2P39993 1459 aaKnown RBP7.62□□□□□ -1.19
SCM3YDL139C SIT4P20604 311 aa7.61□□□□□ -1.19
SCM3YDL139C CST6P40535 587 aa7.61□□□□□ -1.19
SCM3YDL139C FPK1P53739 893 aa7.61□□□□□ -1.19
SCM3YDL139C AIM7Q12156 149 aa7.61□□□□□ -1.19
SCM3YDL139C PDR10P51533 1564 aa7.61□□□□□ -1.19
SCM3YDL139C VPS15P22219 1454 aa7.61□□□□□ -1.19
SCM3YDL139C YMR196WQ04336 1088 aa7.6□□□□□ -1.19
SCM3YDL139C PAC1P39946 494 aaKnown RBP7.59□□□□□ -1.19
SCM3YDL139C RTF1P53064 558 aa7.59□□□□□ -1.19
SCM3YDL139C TUB4P53378 473 aa7.59□□□□□ -1.19
SCM3YDL139C FRK1Q03002 865 aaPredicted RBP7.59□□□□□ -1.19
SCM3YDL139C PDR12Q02785 1511 aa7.58□□□□□ -1.2
SCM3YDL139C AGE1Q04412 482 aa7.58□□□□□ -1.2
SCM3YDL139C SCJ1P25303 377 aa7.57□□□□□ -1.2
SCM3YDL139C DOP1Q03921 1698 aa7.57□□□□□ -1.2
SCM3YDL139C SLY41P22215 453 aa7.56□□□□□ -1.2
SCM3YDL139C MET5P47169 1442 aa7.55□□□□□ -1.2
SCM3YDL139C BDP1P46678 594 aa7.55□□□□□ -1.2
SCM3YDL139C LAM6Q08001 693 aa7.55□□□□□ -1.2
SCM3YDL139C BNI1P41832 1953 aa7.55□□□□□ -1.2
SCM3YDL139C CLA4P48562 842 aa7.54□□□□□ -1.2
SCM3YDL139C IKI3Q06706 1349 aaKnown RBP7.53□□□□□ -1.2
SCM3YDL139C NUP157P40064 1391 aaKnown RBP7.51□□□□□ -1.21
SCM3YDL139C AIR1P40507 360 aaKnown RBP7.51□□□□□ -1.21
SCM3YDL139C HST2P53686 357 aa7.51□□□□□ -1.21
SCM3YDL139C TYW1Q08960 810 aaKnown RBP7.51□□□□□ -1.21
SCM3YDL139C MMP1Q12372 583 aa7.51□□□□□ -1.21
SCM3YDL139C TRK1P12685 1235 aa7.5□□□□□ -1.21
SCM3YDL139C GUA1P38625 525 aaKnown RBP7.5□□□□□ -1.21
SCM3YDL139C ESS1P22696 170 aa7.49□□□□□ -1.21
SCM3YDL139C GLN1P32288 370 aaKnown RBP7.48□□□□□ -1.21
SCM3YDL139C PUS5Q06244 254 aa7.48□□□□□ -1.21
SCM3YDL139C YSP2Q06681 1438 aa7.47□□□□□ -1.21
SCM3YDL139C MOD5P07884 428 aa7.47□□□□□ -1.21
SCM3YDL139C KXD1P53158 218 aa7.46□□□□□ -1.22
SCM3YDL139C CAT8P39113 1433 aa7.45□□□□□ -1.22
SCM3YDL139C CHC1P22137 1653 aaKnown RBP7.45□□□□□ -1.22
SCM3YDL139C PUS6P53294 404 aa7.45□□□□□ -1.22
SCM3YDL139C TBF1Q02457 562 aa7.45□□□□□ -1.22
SCM3YDL139C TRM1P15565 570 aaKnown RBP7.44□□□□□ -1.22
SCM3YDL139C KTR1P27810 393 aaKnown RBP7.44□□□□□ -1.22
SCM3YDL139C YJU3P28321 313 aa7.44□□□□□ -1.22
SCM3YDL139C VMR1P38735 1592 aa7.44□□□□□ -1.22
SCM3YDL139C PDC1P06169 563 aaKnown RBP7.43□□□□□ -1.22
SCM3YDL139C YDL206WQ12424 762 aa7.43□□□□□ -1.22
SCM3YDL139C RTT106P40161 455 aa7.42□□□□□ -1.22
SCM3YDL139C IQG1Q12280 1495 aa7.42□□□□□ -1.22
SCM3YDL139C HXT10P43581 546 aa7.41□□□□□ -1.22
SCM3YDL139C CSN12P47130 423 aa7.41□□□□□ -1.22
SCM3YDL139C PKH3Q03306 898 aaPredicted RBP7.41□□□□□ -1.22
SCM3YDL139C HED1Q03937 162 aa7.41□□□□□ -1.22
SCM3YDL139C YOR093CQ12275 1648 aa7.41□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 58 ms