RNA–Protein interactions for RNA: YCR096C

HMRA2, Transcript of Silenced copy of a2 at HMR, yeast

Gene HMRA2, Length 360 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HMRA2	YCR096C	VAC17	P25591	423 aa		6.16	□□□□□ -1.42
HMRA2	YCR096C	DLD1	P32891	587 aa		6.16	□□□□□ -1.42
HMRA2	YCR096C	YBL086C	P38177	466 aa		6.16	□□□□□ -1.42
HMRA2	YCR096C	ICP55	P40051	511 aa		6.16	□□□□□ -1.42
HMRA2	YCR096C	YJR098C	P47139	656 aa		6.16	□□□□□ -1.42
HMRA2	YCR096C	ITT1	Q04638	464 aa		6.15	□□□□□ -1.42
HMRA2	YCR096C	TCB1	Q12466	1186 aa		6.15	□□□□□ -1.42
HMRA2	YCR096C	YPR204W	Q08995	1032 aa		6.14	□□□□□ -1.43
HMRA2	YCR096C	MMP1	Q12372	583 aa		6.14	□□□□□ -1.43
HMRA2	YCR096C	ROG3	P43602	733 aa		6.13	□□□□□ -1.43
HMRA2	YCR096C	APP1	P53933	587 aa		6.13	□□□□□ -1.43
HMRA2	YCR096C	TY1A-MR1	Q04215	440 aa		6.13	□□□□□ -1.43
HMRA2	YCR096C	SAS10	Q12136	610 aa	Predicted RBP	6.13	□□□□□ -1.43
HMRA2	YCR096C	OSH7	P38755	437 aa		6.12	□□□□□ -1.43
HMRA2	YCR096C	CCP1	P00431	361 aa		6.11	□□□□□ -1.43
HMRA2	YCR096C	ESS1	P22696	170 aa		6.11	□□□□□ -1.43
HMRA2	YCR096C	SPB4	P25808	606 aa	Predicted RBP	6.11	□□□□□ -1.43
HMRA2	YCR096C	LSB3	P43603	459 aa	Known RBP	6.11	□□□□□ -1.43
HMRA2	YCR096C	PUS1	Q12211	544 aa	Known RBP	6.1	□□□□□ -1.43
HMRA2	YCR096C	DPH6	Q12429	685 aa		6.1	□□□□□ -1.43
HMRA2	YCR096C	YJU3	P28321	313 aa		6.08	□□□□□ -1.44
HMRA2	YCR096C	GLN1	P32288	370 aa	Known RBP	6.08	□□□□□ -1.44
HMRA2	YCR096C	MDJ1	P35191	511 aa		6.08	□□□□□ -1.44
HMRA2	YCR096C	EMW1	P42842	904 aa	Known RBP	6.08	□□□□□ -1.44
HMRA2	YCR096C	RSC30	P38781	883 aa		6.05	□□□□□ -1.44
HMRA2	YCR096C	LYS5	P50113	272 aa		6.05	□□□□□ -1.44
HMRA2	YCR096C	PHM7	Q12252	991 aa		6.04	□□□□□ -1.44
HMRA2	YCR096C	NAM8	Q00539	523 aa	Known RBP	6.03	□□□□□ -1.44
HMRA2	YCR096C	JJJ3	P47138	172 aa		6.02	□□□□□ -1.45
HMRA2	YCR096C	DFG5	Q05031	458 aa		6.01	□□□□□ -1.45
HMRA2	YCR096C	CDC19	P00549	500 aa	Known RBP	5.99	□□□□□ -1.45
HMRA2	YCR096C	MKS1	P34072	584 aa		5.99	□□□□□ -1.45
HMRA2	YCR096C	FIG4	P42837	879 aa		5.99	□□□□□ -1.45
HMRA2	YCR096C	ATF2	P53296	535 aa		5.99	□□□□□ -1.45
HMRA2	YCR096C	KTR1	P27810	393 aa	Known RBP	5.97	□□□□□ -1.45
HMRA2	YCR096C	NSG2	P53898	299 aa		5.97	□□□□□ -1.45
HMRA2	YCR096C	YFL066C	P43538	392 aa		5.96	□□□□□ -1.46
HMRA2	YCR096C	THI72	Q08579	599 aa		5.96	□□□□□ -1.46
HMRA2	YCR096C	PKH3	Q03306	898 aa	Predicted RBP	5.95	□□□□□ -1.46
HMRA2	YCR096C	ARG8	P18544	423 aa		5.94	□□□□□ -1.46
HMRA2	YCR096C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	not detected
HMRA2	YCR096C	BDS1	Q08347	646 aa		5.94	□□□□□ -1.46
HMRA2	YCR096C	STE6	P12866	1290 aa		5.92	□□□□□ -1.46
HMRA2	YCR096C	CCT8	P47079	568 aa	Known RBP	5.92	□□□□□ -1.46
HMRA2	YCR096C	CUZ1	P53899	274 aa		5.92	□□□□□ -1.46
HMRA2	YCR096C	AI1	P03875	834 aa		5.91	□□□□□ -1.46
HMRA2	YCR096C	FBP26	P32604	452 aa		5.91	□□□□□ -1.46
HMRA2	YCR096C	GLC3	P32775	704 aa		5.91	□□□□□ -1.46
HMRA2	YCR096C	DMA1	P38823	416 aa		5.89	□□□□□ -1.47
HMRA2	YCR096C	VTC4	P47075	721 aa		5.89	□□□□□ -1.47
HMRA2	YCR096C	YPR084W	Q06821	456 aa		5.89	□□□□□ -1.47
HMRA2	YCR096C	TEC1	P18412	486 aa		5.87	□□□□□ -1.47
HMRA2	YCR096C	CEM1	P39525	442 aa		5.87	□□□□□ -1.47
HMRA2	YCR096C	YNR021W	P53723	404 aa	Known RBP	5.87	□□□□□ -1.47
HMRA2	YCR096C	DAL1	P32375	460 aa		5.86	□□□□□ -1.47
HMRA2	YCR096C	ISU1	Q03020	165 aa		5.84	□□□□□ -1.47
HMRA2	YCR096C	RAD59	Q12223	238 aa		5.83	□□□□□ -1.48
HMRA2	YCR096C	YPR053C	Q6Q5F3	151 aa		5.83	□□□□□ -1.48
HMRA2	YCR096C	CSN12	P47130	423 aa		5.82	□□□□□ -1.48
HMRA2	YCR096C	SYT1	Q06836	1226 aa		5.82	□□□□□ -1.48
HMRA2	YCR096C	SBE2	P42223	864 aa	Known RBP	5.81	□□□□□ -1.48
HMRA2	YCR096C	YMR265C	Q03508	461 aa	Known RBP	5.8	□□□□□ -1.48
HMRA2	YCR096C	ATG20	Q07528	640 aa		5.8	□□□□□ -1.48
HMRA2	YCR096C	DIT1	P21623	536 aa		5.79	□□□□□ -1.48
HMRA2	YCR096C	SKN7	P38889	622 aa		5.79	□□□□□ -1.48
HMRA2	YCR096C	ADE12	P80210	433 aa	Known RBP	5.79	□□□□□ -1.48
HMRA2	YCR096C	TDA6	Q06466	467 aa		5.79	□□□□□ -1.48
HMRA2	YCR096C	SBP1	P10080	294 aa	Known RBP	5.78	□□□□□ -1.48
HMRA2	YCR096C	DLD3	P39976	496 aa	Known RBP	5.78	□□□□□ -1.48
HMRA2	YCR096C	GUT2	P32191	649 aa		5.77	□□□□□ -1.49
HMRA2	YCR096C	SLA1	P32790	1244 aa		5.77	□□□□□ -1.49
HMRA2	YCR096C	UBP15	P50101	1230 aa		5.77	□□□□□ -1.49
HMRA2	YCR096C	SSN3	P39073	555 aa		5.76	□□□□□ -1.49
HMRA2	YCR096C	KRE33	P53914	1056 aa	Known RBP	5.76	□□□□□ -1.49
HMRA2	YCR096C	YMR187C	Q03236	431 aa		5.76	□□□□□ -1.49
HMRA2	YCR096C	AIM7	Q12156	149 aa		5.76	□□□□□ -1.49
HMRA2	YCR096C	TY1A-DR3	Q12441	440 aa		5.76	□□□□□ -1.49
HMRA2	YCR096C	YDR461C-A	Q2V2P7	80 aa		5.75	□□□□□ -1.49
HMRA2	YCR096C	GLT1	Q12680	2145 aa	Known RBP	5.74	□□□□□ -1.49
HMRA2	YCR096C	MAK16	P10962	306 aa	Predicted RBP	5.74	□□□□□ -1.49
HMRA2	YCR096C	MSN5	P52918	1224 aa		5.74	□□□□□ -1.49
HMRA2	YCR096C	WTM2	Q12206	467 aa		5.73	□□□□□ -1.49
HMRA2	YCR096C	FRA1	Q07825	749 aa		5.72	□□□□□ -1.49
HMRA2	YCR096C	RPP2B	P02400	110 aa	Known RBP	5.71	□□□□□ -1.5
HMRA2	YCR096C	STE20	Q03497	939 aa	Known RBP	5.71	□□□□□ -1.5
HMRA2	YCR096C	YCK2	P23292	546 aa	Known RBP	5.7	□□□□□ -1.5
HMRA2	YCR096C	YNR014W	P53719	212 aa		5.7	□□□□□ -1.5
HMRA2	YCR096C	MCX1	P38323	520 aa	Predicted RBP	5.69	□□□□□ -1.5
HMRA2	YCR096C	NAF1	P53919	492 aa	Known RBP	5.68	□□□□□ -1.5
HMRA2	YCR096C	GPM1	P00950	247 aa	Known RBP	5.67	□□□□□ -1.5
HMRA2	YCR096C	SPT2	P06843	333 aa	Predicted RBP	5.67	□□□□□ -1.5
HMRA2	YCR096C	DAT1	P13483	248 aa	Known RBP	5.67	□□□□□ -1.5
HMRA2	YCR096C	AHP1	P38013	176 aa	Known RBP	5.67	□□□□□ -1.5
HMRA2	YCR096C	ISR1	Q06098	443 aa	Known RBP	5.67	□□□□□ -1.5
HMRA2	YCR096C	UTR2	P32623	467 aa		5.65	□□□□□ -1.5
HMRA2	YCR096C	SLN1	P39928	1220 aa	Predicted RBP	5.65	□□□□□ -1.5
HMRA2	YCR096C	UTP7	P40055	554 aa	Known RBP	5.65	□□□□□ -1.5
HMRA2	YCR096C	YDR215C	Q12240	137 aa		5.65	□□□□□ -1.5
HMRA2	YCR096C	BOI2	P39969	1040 aa		5.64	□□□□□ -1.51
HMRA2	YCR096C	APL6	P46682	809 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms