RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C SVF1Q05515 481 aa7.02□□□□□ -1.29
PDB1YBR221C SSA2P10592 639 aaKnown RBP7.01□□□□□ -1.29
PDB1YBR221C TYS1P36421 394 aaKnown RBP7.01□□□□□ -1.29
PDB1YBR221C AIM21P40563 679 aa7.01□□□□□ -1.29
PDB1YBR221C NOB1Q08444 459 aaKnown RBP7.01□□□□□ -1.29
PDB1YBR221C USO1P25386 1790 aa7□□□□□ -1.29
PDB1YBR221C MAK16P10962 306 aaPredicted RBP7□□□□□ -1.29
PDB1YBR221C PPG1P32838 368 aa7□□□□□ -1.29
PDB1YBR221C ISW1P38144 1129 aa7□□□□□ -1.29
PDB1YBR221C STM1P39015 273 aaKnown RBP7□□□□□ -1.29
PDB1YBR221C TFG1P41895 735 aaPredicted RBP7□□□□□ -1.29
PDB1YBR221C PSD2P53037 1138 aaKnown RBP7□□□□□ -1.29
PDB1YBR221C RLP24Q07915 199 aaKnown RBP7□□□□□ -1.29
PDB1YBR221C YOL098CQ12496 1037 aa7□□□□□ -1.29
PDB1YBR221C TY1B-NL2Q99337 1749 aaKnown RBP6.99□□□□□ -1.29
PDB1YBR221C RAD2P07276 1031 aa6.99□□□□□ -1.29
PDB1YBR221C SEC20P28791 383 aa6.99□□□□□ -1.29
PDB1YBR221C TTI1P36097 1038 aa6.99□□□□□ -1.29
PDB1YBR221C ALD2P47771 506 aa6.99□□□□□ -1.29
PDB1YBR221C APP1P53933 587 aa6.99□□□□□ -1.29
PDB1YBR221C SSB1P11484 613 aaKnown RBP6.98□□□□□ -1.29
PDB1YBR221C SSB2P40150 613 aaKnown RBP6.98□□□□□ -1.29
PDB1YBR221C GIR2Q03768 265 aaPredicted RBP6.98□□□□□ -1.29
PDB1YBR221C TMA64Q04600 565 aaKnown RBP6.98□□□□□ -1.29
PDB1YBR221C YDL121CQ07541 149 aa6.98□□□□□ -1.29
PDB1YBR221C TIF1P10081 395 aaKnown RBP6.97□□□□□ -1.29
PDB1YBR221C REF2P42073 533 aaPredicted RBP6.97□□□□□ -1.29
PDB1YBR221C BOI2P39969 1040 aa6.96□□□□□ -1.3
PDB1YBR221C NOP53Q12080 455 aaKnown RBP6.96□□□□□ -1.3
PDB1YBR221C VMR1P38735 1592 aa6.95□□□□□ -1.3
PDB1YBR221C ERG12P07277 443 aa6.95□□□□□ -1.3
PDB1YBR221C VMA4P22203 233 aaKnown RBP6.95□□□□□ -1.3
PDB1YBR221C MFT1P33441 392 aaKnown RBP6.95□□□□□ -1.3
PDB1YBR221C ERP2P39704 215 aa6.95□□□□□ -1.3
PDB1YBR221C RPA135P22138 1203 aaKnown RBP6.94□□□□□ -1.3
PDB1YBR221C NOC2P39744 710 aaKnown RBP6.94□□□□□ -1.3
PDB1YBR221C MPP10P47083 593 aaKnown RBP6.94□□□□□ -1.3
PDB1YBR221C YOL057WQ08225 711 aa6.94□□□□□ -1.3
PDB1YBR221C IML1P47170 1584 aa6.94□□□□□ -1.3
PDB1YBR221C SRB8P25648 1427 aa6.93□□□□□ -1.3
PDB1YBR221C MPE1P35728 441 aaKnown RBP6.93□□□□□ -1.3
PDB1YBR221C VPS27P40343 622 aaKnown RBP6.93□□□□□ -1.3
PDB1YBR221C YMR074CQ04773 145 aa6.93□□□□□ -1.3
PDB1YBR221C YPR204WQ08995 1032 aa6.93□□□□□ -1.3
PDB1YBR221C ECM16Q04217 1267 aaKnown RBP6.92□□□□□ -1.3
PDB1YBR221C RRP15Q06511 250 aaPredicted RBP6.92□□□□□ -1.3
PDB1YBR221C YBT1P32386 1661 aa6.91□□□□□ -1.3
PDB1YBR221C CSN12P47130 423 aa6.91□□□□□ -1.3
PDB1YBR221C ALG12P53730 551 aa6.91□□□□□ -1.3
PDB1YBR221C NUP188P52593 1655 aaKnown RBP6.9□□□□□ -1.3
PDB1YBR221C SRP40P32583 406 aaPredicted RBP6.9□□□□□ -1.3
PDB1YBR221C POL5P39985 1022 aaKnown RBP6.9□□□□□ -1.3
PDB1YBR221C POB3Q04636 552 aaKnown RBP6.9□□□□□ -1.3
PDB1YBR221C KAR1P11927 433 aa6.89□□□□□ -1.31
PDB1YBR221C MAK11P20484 414 aaKnown RBP6.89□□□□□ -1.31
PDB1YBR221C RTG2P32608 588 aaKnown RBP6.89□□□□□ -1.31
PDB1YBR221C MSC6Q08818 692 aaKnown RBP6.89□□□□□ -1.31
PDB1YBR221C IES1P43579 692 aa6.88□□□□□ -1.31
PDB1YBR221C POL32P47110 350 aa6.88□□□□□ -1.31
PDB1YBR221C YGL081WP53156 320 aa6.88□□□□□ -1.31
PDB1YBR221C CEF1Q03654 590 aaPredicted RBP6.88□□□□□ -1.31
PDB1YBR221C YML083CQ04526 418 aa6.88□□□□□ -1.31
PDB1YBR221C COX6P00427 148 aa6.87□□□□□ -1.31
PDB1YBR221C AI2P03876 854 aa6.87□□□□□ -1.31
PDB1YBR221C CIT2P08679 460 aa6.87□□□□□ -1.31
PDB1YBR221C PUP1P25043 261 aa6.87□□□□□ -1.31
PDB1YBR221C BIO2P32451 375 aa6.87□□□□□ -1.31
PDB1YBR221C ESF2P53743 316 aaKnown RBP6.87□□□□□ -1.31
PDB1YBR221C OYE2Q03558 400 aaKnown RBP6.87□□□□□ -1.31
PDB1YBR221C JIP5Q06214 492 aaPredicted RBP6.87□□□□□ -1.31
PDB1YBR221C NHA1Q99271 985 aa6.87□□□□□ -1.31
PDB1YBR221C GRX4P32642 244 aa6.86□□□□□ -1.31
PDB1YBR221C YKL091CP33324 310 aaKnown RBP6.86□□□□□ -1.31
PDB1YBR221C COG4Q06096 861 aa6.86□□□□□ -1.31
PDB1YBR221C NKP1Q12493 238 aa6.86□□□□□ -1.31
PDB1YBR221C YBL113CQ7M4S9 792 aa6.86□□□□□ -1.31
PDB1YBR221C SPT16P32558 1035 aaKnown RBP6.85□□□□□ -1.31
PDB1YBR221C YBL036CP38197 257 aa6.85□□□□□ -1.31
PDB1YBR221C DNM1P54861 757 aa6.85□□□□□ -1.31
PDB1YBR221C MAG2Q06436 670 aaKnown RBP6.85□□□□□ -1.31
PDB1YBR221C PDR11P40550 1411 aa6.84□□□□□ -1.31
PDB1YBR221C ATE1P16639 503 aa6.84□□□□□ -1.31
PDB1YBR221C HOS4P40480 1083 aa6.84□□□□□ -1.31
PDB1YBR221C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
PDB1YBR221C ENT1Q12518 454 aa6.84□□□□□ -1.31
PDB1YBR221C BCK1Q01389 1478 aa6.84□□□□□ -1.31
PDB1YBR221C PDR5P33302 1511 aaKnown RBP6.83□□□□□ -1.32
PDB1YBR221C BLI1P35727 113 aa6.83□□□□□ -1.32
PDB1YBR221C GRX7P38068 203 aa6.83□□□□□ -1.32
PDB1YBR221C PSH1Q12161 406 aa6.83□□□□□ -1.32
PDB1YBR221C YNR029CP53729 429 aaKnown RBP6.82□□□□□ -1.32
PDB1YBR221C NSE3Q05541 303 aa6.82□□□□□ -1.32
PDB1YBR221C ENT2Q05785 613 aa6.82□□□□□ -1.32
PDB1YBR221C ENV9Q08651 330 aa6.82□□□□□ -1.32
PDB1YBR221C CFT1Q06632 1357 aaKnown RBP6.82□□□□□ -1.32
PDB1YBR221C PWP2P25635 923 aaKnown RBP6.81□□□□□ -1.32
PDB1YBR221C DPB3P27344 201 aa6.81□□□□□ -1.32
PDB1YBR221C SEC8P32855 1065 aa6.81□□□□□ -1.32
PDB1YBR221C CDC27P38042 758 aa6.81□□□□□ -1.32
PDB1YBR221C RCR1P38212 213 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms