RNA–Protein interactions for RNA: YBR186W

PCH2, Transcript of Hexameric ring ATPase that remodels chromosome axis protein Hop1p, yeast

Gene PCH2, Length 1,695 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCH2	YBR186W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	13.99	□□□□□ -0.17	not detected
PCH2	YBR186W	NOP58	Q12499	511 aa	Known RBP	13.99	□□□□□ -0.17
PCH2	YBR186W	RSC1	P53236	928 aa		13.98	□□□□□ -0.17
PCH2	YBR186W	SPO1	P53541	631 aa		13.97	□□□□□ -0.17
PCH2	YBR186W	YNL050C	P53952	270 aa		13.97	□□□□□ -0.17
PCH2	YBR186W	SRT1	Q03175	343 aa		13.97	□□□□□ -0.17
PCH2	YBR186W	BRN1	P38170	754 aa		13.96	□□□□□ -0.17
PCH2	YBR186W	NMD2	P38798	1089 aa	Known RBP	13.96	□□□□□ -0.17
PCH2	YBR186W	ZDS1	P50111	915 aa	Known RBP	13.96	□□□□□ -0.17
PCH2	YBR186W	PIL1	P53252	339 aa	Known RBP	13.96	□□□□□ -0.17
PCH2	YBR186W	CSI1	Q04368	295 aa		13.96	□□□□□ -0.17
PCH2	YBR186W	RPS24A	P0CX31	135 aa	Known RBP	13.95	□□□□□ -0.18
PCH2	YBR186W	RPS24B	P0CX32	135 aa	Known RBP	13.95	□□□□□ -0.18
PCH2	YBR186W	MAM1	P40065	302 aa		13.95	□□□□□ -0.18
PCH2	YBR186W	ITT1	Q04638	464 aa		13.95	□□□□□ -0.18
PCH2	YBR186W	QCR6	P00127	147 aa		13.94	□□□□□ -0.18
PCH2	YBR186W	BDH2	P39713	417 aa		13.94	□□□□□ -0.18
PCH2	YBR186W	DPS1	P04802	557 aa	Known RBP	13.93	□□□□□ -0.18
PCH2	YBR186W	NPA3	P47122	385 aa		13.92	□□□□□ -0.18
PCH2	YBR186W	APC1	P53886	1748 aa		13.91	□□□□□ -0.18
PCH2	YBR186W	TY1B-NL2	Q99337	1749 aa	Known RBP	13.91	□□□□□ -0.18
PCH2	YBR186W	RKM3	P38222	552 aa		13.91	□□□□□ -0.18
PCH2	YBR186W	YBR287W	P38355	427 aa		13.91	□□□□□ -0.18
PCH2	YBR186W	HXT13	P39924	564 aa		13.9	□□□□□ -0.18
PCH2	YBR186W	MDG1	P53885	366 aa		13.9	□□□□□ -0.18
PCH2	YBR186W	ROM2	P51862	1356 aa	Known RBP	13.9	□□□□□ -0.18
PCH2	YBR186W	RPS19A	P07280	144 aa	Known RBP	13.89	□□□□□ -0.19
PCH2	YBR186W	RPS19B	P07281	144 aa	Predicted RBP	13.89	□□□□□ -0.19
PCH2	YBR186W	CIR1	P42940	261 aa		13.89	□□□□□ -0.19
PCH2	YBR186W	YGL081W	P53156	320 aa		13.89	□□□□□ -0.19
PCH2	YBR186W	HST1	P53685	503 aa		13.89	□□□□□ -0.19
PCH2	YBR186W	VPS20	Q04272	221 aa		13.89	□□□□□ -0.19
PCH2	YBR186W	PRP43	P53131	767 aa	Known RBP	13.88	□□□□□ -0.19
PCH2	YBR186W	NTH2	P35172	780 aa		13.88	□□□□□ -0.19
PCH2	YBR186W	RNR2	P09938	399 aa	Known RBP	13.87	□□□□□ -0.19
PCH2	YBR186W	RPN12	P32496	274 aa		13.87	□□□□□ -0.19
PCH2	YBR186W	RVS167	P39743	482 aa	Known RBP	13.87	□□□□□ -0.19
PCH2	YBR186W	HXT17	P53631	564 aa		13.85	□□□□□ -0.19
PCH2	YBR186W	BNI1	P41832	1953 aa		13.85	□□□□□ -0.19
PCH2	YBR186W	BMS1	Q08965	1183 aa	Known RBP	13.85	□□□□□ -0.19
PCH2	YBR186W	BIK1	P11709	440 aa		13.84	□□□□□ -0.19
PCH2	YBR186W	MCM2	P29469	868 aa		13.84	□□□□□ -0.19
PCH2	YBR186W	YNR029C	P53729	429 aa	Known RBP	13.84	□□□□□ -0.19
PCH2	YBR186W	HRQ1	Q05549	1077 aa		13.84	□□□□□ -0.19
PCH2	YBR186W	ESC2	Q06340	456 aa		13.84	□□□□□ -0.19
PCH2	YBR186W	ADE6	P38972	1358 aa	Known RBP	13.83	□□□□□ -0.19
PCH2	YBR186W	CDC16	P09798	840 aa		13.83	□□□□□ -0.2
PCH2	YBR186W	MIC60	P36112	540 aa		13.83	□□□□□ -0.2
PCH2	YBR186W	RSM25	P40496	264 aa		13.83	□□□□□ -0.2
PCH2	YBR186W	KEX1	P09620	729 aa		13.82	□□□□□ -0.2
PCH2	YBR186W	AIM44	Q99299	758 aa		13.82	□□□□□ -0.2
PCH2	YBR186W	VAS1	P07806	1104 aa	Known RBP	13.82	□□□□□ -0.2
PCH2	YBR186W	TPM2	P40414	161 aa		13.8	□□□□□ -0.2
PCH2	YBR186W	HYR1	P40581	163 aa	Known RBP	13.8	□□□□□ -0.2
PCH2	YBR186W	KRE33	P53914	1056 aa	Known RBP	13.8	□□□□□ -0.2
PCH2	YBR186W	NOP8	Q08287	484 aa	Predicted RBP	13.8	□□□□□ -0.2
PCH2	YBR186W	COQ4	O13525	335 aa		13.79	□□□□□ -0.2
PCH2	YBR186W	LYS2	P07702	1392 aa		13.79	□□□□□ -0.2
PCH2	YBR186W	TRL1	P09880	827 aa	Known RBP	13.79	□□□□□ -0.2
PCH2	YBR186W	GCD7	P32502	381 aa	Predicted RBP	13.78	□□□□□ -0.2
PCH2	YBR186W	RAD24	P32641	659 aa		13.78	□□□□□ -0.2
PCH2	YBR186W	APC11	Q12157	165 aa		13.76	□□□□□ -0.21
PCH2	YBR186W	HSP104	P31539	908 aa	Known RBP	13.75	□□□□□ -0.21
PCH2	YBR186W	BDP1	P46678	594 aa		13.75	□□□□□ -0.21
PCH2	YBR186W	YGR122W	P53272	402 aa		13.75	□□□□□ -0.21
PCH2	YBR186W	AOS1	Q06624	347 aa		13.75	□□□□□ -0.21
PCH2	YBR186W	RPN1	P38764	993 aa	Known RBP	13.73	□□□□□ -0.21
PCH2	YBR186W	CWH41	P53008	833 aa		13.73	□□□□□ -0.21
PCH2	YBR186W	DID4	P36108	232 aa		13.72	□□□□□ -0.21
PCH2	YBR186W	KRI1	P42846	591 aa	Known RBP	13.72	□□□□□ -0.21
PCH2	YBR186W	YRF1-2	P40105	1681 aa		13.71	□□□□□ -0.21
PCH2	YBR186W	HGH1	P48362	394 aa	Known RBP	13.71	□□□□□ -0.21
PCH2	YBR186W	HOS3	Q02959	697 aa	Known RBP	13.71	□□□□□ -0.21
PCH2	YBR186W	NSE3	Q05541	303 aa		13.7	□□□□□ -0.22
PCH2	YBR186W	PEX19	Q07418	342 aa		13.7	□□□□□ -0.22
PCH2	YBR186W	RRP5	Q05022	1729 aa	Known RBP	13.69	□□□□□ -0.22
PCH2	YBR186W	CYC8	P14922	966 aa		13.69	□□□□□ -0.22
PCH2	YBR186W	SIS2	P36024	562 aa		13.69	□□□□□ -0.22
PCH2	YBR186W	MRPL10	P36520	322 aa		13.69	□□□□□ -0.22
PCH2	YBR186W	BOI2	P39969	1040 aa		13.69	□□□□□ -0.22
PCH2	YBR186W	STU2	P46675	888 aa		13.69	□□□□□ -0.22
PCH2	YBR186W	YOL057W	Q08225	711 aa		13.68	□□□□□ -0.22
PCH2	YBR186W	MRP7	P12687	371 aa		13.67	□□□□□ -0.22
PCH2	YBR186W	UGA3	P26370	528 aa		13.67	□□□□□ -0.22
PCH2	YBR186W	FAP1	P53971	965 aa		13.67	□□□□□ -0.22
PCH2	YBR186W	CTF4	Q01454	927 aa		13.67	□□□□□ -0.22
PCH2	YBR186W	FPR4	Q06205	392 aa	Predicted RBP	13.67	□□□□□ -0.22
PCH2	YBR186W	DUR1,2	P32528	1835 aa	Known RBP	13.67	□□□□□ -0.22
PCH2	YBR186W	TAF13	P11747	167 aa		13.66	□□□□□ -0.22
PCH2	YBR186W	MPE1	P35728	441 aa	Known RBP	13.66	□□□□□ -0.22
PCH2	YBR186W	TCD1	P38756	429 aa		13.66	□□□□□ -0.22
PCH2	YBR186W	MAK10	Q02197	733 aa		13.66	□□□□□ -0.22
PCH2	YBR186W	RPL19A	P0CX82	189 aa	Known RBP	13.66	□□□□□ -0.22
PCH2	YBR186W	RPL19B	P0CX83	189 aa	Predicted RBP	13.66	□□□□□ -0.22
PCH2	YBR186W	SWC3	P31376	625 aa		13.66	□□□□□ -0.22
PCH2	YBR186W	CCT5	P40413	562 aa	Known RBP	13.65	□□□□□ -0.22
PCH2	YBR186W	ELM1	P32801	640 aa		13.64	□□□□□ -0.23
PCH2	YBR186W	PBY1	P38254	753 aa		13.64	□□□□□ -0.23
PCH2	YBR186W	YGR130C	P53278	816 aa		13.63	□□□□□ -0.23
PCH2	YBR186W	TIM50	Q02776	476 aa		13.63	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 110.4 ms