RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W CIR1P42940 261 aa8.51□□□□□ -1.05
TOD6YBL054W YGL081WP53156 320 aa8.51□□□□□ -1.05
TOD6YBL054W GCR2Q01722 534 aa8.51□□□□□ -1.05
TOD6YBL054W AVT3P36062 692 aa8.5□□□□□ -1.05
TOD6YBL054W MIC60P36112 540 aa8.5□□□□□ -1.05
TOD6YBL054W PRY3P47033 881 aa8.5□□□□□ -1.05
TOD6YBL054W HST1P53685 503 aa8.5□□□□□ -1.05
TOD6YBL054W SPT21P35209 758 aa8.49□□□□□ -1.05
TOD6YBL054W BRN1P38170 754 aa8.49□□□□□ -1.05
TOD6YBL054W IPL1P38991 367 aa8.49□□□□□ -1.05
TOD6YBL054W RAD26P40352 1085 aa8.49□□□□□ -1.05
TOD6YBL054W HOS3Q02959 697 aaKnown RBP8.49□□□□□ -1.05
TOD6YBL054W SMC3P47037 1230 aa8.48□□□□□ -1.05
TOD6YBL054W VPS20Q04272 221 aa8.48□□□□□ -1.05
TOD6YBL054W TCD1P38756 429 aa8.48□□□□□ -1.05
TOD6YBL054W KEX1P09620 729 aa8.47□□□□□ -1.05
TOD6YBL054W RFC1P38630 861 aaKnown RBP8.47□□□□□ -1.05
TOD6YBL054W RSM25P40496 264 aa8.47□□□□□ -1.05
TOD6YBL054W URN1Q06525 465 aaKnown RBP8.47□□□□□ -1.05
TOD6YBL054W TY1B-NL2Q99337 1749 aaKnown RBP8.47□□□□□ -1.05
TOD6YBL054W RNR2P09938 399 aaKnown RBP8.46□□□□□ -1.06
TOD6YBL054W GRX4P32642 244 aa8.46□□□□□ -1.06
TOD6YBL054W NMD2P38798 1089 aaKnown RBP8.46□□□□□ -1.06
TOD6YBL054W HXT13P39924 564 aa8.46□□□□□ -1.06
TOD6YBL054W SPO1P53541 631 aa8.46□□□□□ -1.06
TOD6YBL054W KRE33P53914 1056 aaKnown RBP8.46□□□□□ -1.06
TOD6YBL054W LYS2P07702 1392 aa8.45□□□□□ -1.06
TOD6YBL054W BIK1P11709 440 aa8.45□□□□□ -1.06
TOD6YBL054W YNG2P38806 282 aaKnown RBP8.45□□□□□ -1.06
TOD6YBL054W RTF1P53064 558 aa8.45□□□□□ -1.06
TOD6YBL054W HRQ1Q05549 1077 aa8.45□□□□□ -1.06
TOD6YBL054W STU2P46675 888 aa8.44□□□□□ -1.06
TOD6YBL054W RCM1P53972 490 aa8.44□□□□□ -1.06
TOD6YBL054W RPO41P13433 1351 aaKnown RBP8.44□□□□□ -1.06
TOD6YBL054W LTV1P34078 463 aa8.44□□□□□ -1.06
TOD6YBL054W KRI1P42846 591 aaKnown RBP8.44□□□□□ -1.06
TOD6YBL054W CYC8P14922 966 aa8.43□□□□□ -1.06
TOD6YBL054W HYR1P40581 163 aaKnown RBP8.43□□□□□ -1.06
TOD6YBL054W NOP53Q12080 455 aaKnown RBP8.43□□□□□ -1.06
TOD6YBL054W PPH3P32345 308 aa8.42□□□□□ -1.06
TOD6YBL054W GYP7P48365 746 aa8.42□□□□□ -1.06
TOD6YBL054W HXT17P53631 564 aa8.42□□□□□ -1.06
TOD6YBL054W CSI1Q04368 295 aa8.42□□□□□ -1.06
TOD6YBL054W APC1P53886 1748 aa8.41□□□□□ -1.06
TOD6YBL054W PBY1P38254 753 aa8.41□□□□□ -1.06
TOD6YBL054W CWH41P53008 833 aa8.41□□□□□ -1.06
TOD6YBL054W APC11Q12157 165 aa8.41□□□□□ -1.06
TOD6YBL054W SFI1Q12369 946 aa8.41□□□□□ -1.06
TOD6YBL054W DUR1,2P32528 1835 aaKnown RBP8.4□□□□□ -1.06
TOD6YBL054W LEU2P04173 364 aaPredicted RBP8.4□□□□□ -1.06
TOD6YBL054W DID4P36108 232 aa8.4□□□□□ -1.06
TOD6YBL054W MRPL10P36520 322 aa8.4□□□□□ -1.06
TOD6YBL054W CIN4P39110 191 aa8.4□□□□□ -1.06
TOD6YBL054W DSD1P53095 428 aa8.4□□□□□ -1.06
TOD6YBL054W SRT1Q03175 343 aa8.4□□□□□ -1.06
TOD6YBL054W MPE1P35728 441 aaKnown RBP8.39□□□□□ -1.07
TOD6YBL054W VPS60Q03390 229 aa8.39□□□□□ -1.07
TOD6YBL054W TRL1P09880 827 aaKnown RBP8.39□□□□□ -1.07
TOD6YBL054W RNA1P11745 407 aaKnown RBP8.39□□□□□ -1.07
TOD6YBL054W VAS1P07806 1104 aaKnown RBP8.38□□□□□ -1.07
TOD6YBL054W MFT1P33441 392 aaKnown RBP8.38□□□□□ -1.07
TOD6YBL054W MTR4P47047 1073 aaKnown RBP8.38□□□□□ -1.07
TOD6YBL054W TIM50Q02776 476 aa8.38□□□□□ -1.07
TOD6YBL054W PEX19Q07418 342 aa8.38□□□□□ -1.07
TOD6YBL054W RPS19AP07280 144 aaKnown RBP8.37□□□□□ -1.07
TOD6YBL054W RPS19BP07281 144 aaPredicted RBP8.37□□□□□ -1.07
TOD6YBL054W CDC16P09798 840 aa8.37□□□□□ -1.07
TOD6YBL054W AKL1P38080 1108 aaKnown RBP8.37□□□□□ -1.07
TOD6YBL054W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
TOD6YBL054W CLB5P30283 435 aa8.36□□□□□ -1.07
TOD6YBL054W YBR287WP38355 427 aa8.36□□□□□ -1.07
TOD6YBL054W RIX1P38883 763 aaPredicted RBP8.36□□□□□ -1.07
TOD6YBL054W CEP3P40969 608 aa8.36□□□□□ -1.07
TOD6YBL054W MRX12P47084 519 aa8.36□□□□□ -1.07
TOD6YBL054W ZDS1P50111 915 aaKnown RBP8.36□□□□□ -1.07
TOD6YBL054W YNL050CP53952 270 aa8.36□□□□□ -1.07
TOD6YBL054W TAF13P11747 167 aa8.35□□□□□ -1.07
TOD6YBL054W MAM1P40065 302 aa8.35□□□□□ -1.07
TOD6YBL054W SSL2Q00578 843 aa8.35□□□□□ -1.07
TOD6YBL054W SPB4P25808 606 aaPredicted RBP8.35□□□□□ -1.07
TOD6YBL054W MNR2P35724 969 aa8.35□□□□□ -1.07
TOD6YBL054W GAS4Q08271 471 aa8.35□□□□□ -1.07
TOD6YBL054W NOP14Q99207 810 aaKnown RBP8.35□□□□□ -1.07
TOD6YBL054W SES1P07284 462 aaKnown RBP8.34□□□□□ -1.07
TOD6YBL054W FPR4Q06205 392 aaPredicted RBP8.34□□□□□ -1.07
TOD6YBL054W CLB1P24868 471 aa8.33□□□□□ -1.08
TOD6YBL054W DEP1P31385 405 aa8.33□□□□□ -1.08
TOD6YBL054W UTP13Q05946 817 aaKnown RBP8.33□□□□□ -1.08
TOD6YBL054W NPR3P38742 1146 aa8.32□□□□□ -1.08
TOD6YBL054W CCT5P40413 562 aaKnown RBP8.32□□□□□ -1.08
TOD6YBL054W BDP1P46678 594 aa8.32□□□□□ -1.08
TOD6YBL054W DPS1P04802 557 aaKnown RBP8.31□□□□□ -1.08
TOD6YBL054W CWC22P53333 577 aaKnown RBP8.31□□□□□ -1.08
TOD6YBL054W RNT1Q02555 471 aa8.31□□□□□ -1.08
TOD6YBL054W RPL19AP0CX82 189 aaKnown RBP8.31□□□□□ -1.08
TOD6YBL054W RPL19BP0CX83 189 aaPredicted RBP8.31□□□□□ -1.08
TOD6YBL054W GCD7P32502 381 aaPredicted RBP8.31□□□□□ -1.08
TOD6YBL054W RAD24P32641 659 aa8.31□□□□□ -1.08
TOD6YBL054W ELM1P32801 640 aa8.31□□□□□ -1.08
TOD6YBL054W PEX14P53112 341 aa8.31□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms