RNA–Protein interactions for RNA: YBL054W

TOD6, Transcript of PAC motif binding protein involved in rRNA and ribosome biogenesis, yeastyeast

Gene TOD6, Length 1,578 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOD6YBL054W CIR1P42940 261 aa8.51□□□□□ -1.05
TOD6YBL054W YGL081WP53156 320 aa8.51□□□□□ -1.05
TOD6YBL054W GCR2Q01722 534 aa8.51□□□□□ -1.05
TOD6YBL054W AVT3P36062 692 aa8.5□□□□□ -1.05
TOD6YBL054W MIC60P36112 540 aa8.5□□□□□ -1.05
TOD6YBL054W PRY3P47033 881 aa8.5□□□□□ -1.05
TOD6YBL054W HST1P53685 503 aa8.5□□□□□ -1.05
TOD6YBL054W SPT21P35209 758 aa8.49□□□□□ -1.05
TOD6YBL054W BRN1P38170 754 aa8.49□□□□□ -1.05
TOD6YBL054W IPL1P38991 367 aa8.49□□□□□ -1.05
TOD6YBL054W RAD26P40352 1085 aa8.49□□□□□ -1.05
TOD6YBL054W HOS3Q02959 697 aaKnown RBP8.49□□□□□ -1.05
TOD6YBL054W SMC3P47037 1230 aa8.48□□□□□ -1.05
TOD6YBL054W VPS20Q04272 221 aa8.48□□□□□ -1.05
TOD6YBL054W TCD1P38756 429 aa8.48□□□□□ -1.05
TOD6YBL054W KEX1P09620 729 aa8.47□□□□□ -1.05
TOD6YBL054W RFC1P38630 861 aaKnown RBP8.47□□□□□ -1.05
TOD6YBL054W RSM25P40496 264 aa8.47□□□□□ -1.05
TOD6YBL054W URN1Q06525 465 aaKnown RBP8.47□□□□□ -1.05
TOD6YBL054W TY1B-NL2Q99337 1749 aaKnown RBP8.47□□□□□ -1.05
TOD6YBL054W RNR2P09938 399 aaKnown RBP8.46□□□□□ -1.06
TOD6YBL054W GRX4P32642 244 aa8.46□□□□□ -1.06
TOD6YBL054W NMD2P38798 1089 aaKnown RBP8.46□□□□□ -1.06
TOD6YBL054W HXT13P39924 564 aa8.46□□□□□ -1.06
TOD6YBL054W SPO1P53541 631 aa8.46□□□□□ -1.06
TOD6YBL054W KRE33P53914 1056 aaKnown RBP8.46□□□□□ -1.06
TOD6YBL054W LYS2P07702 1392 aa8.45□□□□□ -1.06
TOD6YBL054W BIK1P11709 440 aa8.45□□□□□ -1.06
TOD6YBL054W YNG2P38806 282 aaKnown RBP8.45□□□□□ -1.06
TOD6YBL054W RTF1P53064 558 aa8.45□□□□□ -1.06
TOD6YBL054W HRQ1Q05549 1077 aa8.45□□□□□ -1.06
TOD6YBL054W STU2P46675 888 aa8.44□□□□□ -1.06
TOD6YBL054W RCM1P53972 490 aa8.44□□□□□ -1.06
TOD6YBL054W RPO41P13433 1351 aaKnown RBP8.44□□□□□ -1.06
TOD6YBL054W LTV1P34078 463 aa8.44□□□□□ -1.06
TOD6YBL054W KRI1P42846 591 aaKnown RBP8.44□□□□□ -1.06
TOD6YBL054W CYC8P14922 966 aa8.43□□□□□ -1.06
TOD6YBL054W HYR1P40581 163 aaKnown RBP8.43□□□□□ -1.06
TOD6YBL054W NOP53Q12080 455 aaKnown RBP8.43□□□□□ -1.06
TOD6YBL054W PPH3P32345 308 aa8.42□□□□□ -1.06
TOD6YBL054W GYP7P48365 746 aa8.42□□□□□ -1.06
TOD6YBL054W HXT17P53631 564 aa8.42□□□□□ -1.06
TOD6YBL054W CSI1Q04368 295 aa8.42□□□□□ -1.06
TOD6YBL054W APC1P53886 1748 aa8.41□□□□□ -1.06
TOD6YBL054W PBY1P38254 753 aa8.41□□□□□ -1.06
TOD6YBL054W CWH41P53008 833 aa8.41□□□□□ -1.06
TOD6YBL054W APC11Q12157 165 aa8.41□□□□□ -1.06
TOD6YBL054W SFI1Q12369 946 aa8.41□□□□□ -1.06
TOD6YBL054W DUR1,2P32528 1835 aaKnown RBP8.4□□□□□ -1.06
TOD6YBL054W LEU2P04173 364 aaPredicted RBP8.4□□□□□ -1.06
TOD6YBL054W DID4P36108 232 aa8.4□□□□□ -1.06
TOD6YBL054W MRPL10P36520 322 aa8.4□□□□□ -1.06
TOD6YBL054W CIN4P39110 191 aa8.4□□□□□ -1.06
TOD6YBL054W DSD1P53095 428 aa8.4□□□□□ -1.06
TOD6YBL054W SRT1Q03175 343 aa8.4□□□□□ -1.06
TOD6YBL054W MPE1P35728 441 aaKnown RBP8.39□□□□□ -1.07
TOD6YBL054W VPS60Q03390 229 aa8.39□□□□□ -1.07
TOD6YBL054W TRL1P09880 827 aaKnown RBP8.39□□□□□ -1.07
TOD6YBL054W RNA1P11745 407 aaKnown RBP8.39□□□□□ -1.07
TOD6YBL054W VAS1P07806 1104 aaKnown RBP8.38□□□□□ -1.07
TOD6YBL054W MFT1P33441 392 aaKnown RBP8.38□□□□□ -1.07
TOD6YBL054W MTR4P47047 1073 aaKnown RBP8.38□□□□□ -1.07
TOD6YBL054W TIM50Q02776 476 aa8.38□□□□□ -1.07
TOD6YBL054W PEX19Q07418 342 aa8.38□□□□□ -1.07
TOD6YBL054W RPS19AP07280 144 aaKnown RBP8.37□□□□□ -1.07
TOD6YBL054W RPS19BP07281 144 aaPredicted RBP8.37□□□□□ -1.07
TOD6YBL054W CDC16P09798 840 aa8.37□□□□□ -1.07
TOD6YBL054W AKL1P38080 1108 aaKnown RBP8.37□□□□□ -1.07
TOD6YBL054W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
TOD6YBL054W CLB5P30283 435 aa8.36□□□□□ -1.07
TOD6YBL054W YBR287WP38355 427 aa8.36□□□□□ -1.07
TOD6YBL054W RIX1P38883 763 aaPredicted RBP8.36□□□□□ -1.07
TOD6YBL054W CEP3P40969 608 aa8.36□□□□□ -1.07
TOD6YBL054W MRX12P47084 519 aa8.36□□□□□ -1.07
TOD6YBL054W ZDS1P50111 915 aaKnown RBP8.36□□□□□ -1.07
TOD6YBL054W YNL050CP53952 270 aa8.36□□□□□ -1.07
TOD6YBL054W TAF13P11747 167 aa8.35□□□□□ -1.07
TOD6YBL054W MAM1P40065 302 aa8.35□□□□□ -1.07
TOD6YBL054W SSL2Q00578 843 aa8.35□□□□□ -1.07
TOD6YBL054W SPB4P25808 606 aaPredicted RBP8.35□□□□□ -1.07
TOD6YBL054W MNR2P35724 969 aa8.35□□□□□ -1.07
TOD6YBL054W GAS4Q08271 471 aa8.35□□□□□ -1.07
TOD6YBL054W NOP14Q99207 810 aaKnown RBP8.35□□□□□ -1.07
TOD6YBL054W SES1P07284 462 aaKnown RBP8.34□□□□□ -1.07
TOD6YBL054W FPR4Q06205 392 aaPredicted RBP8.34□□□□□ -1.07
TOD6YBL054W CLB1P24868 471 aa8.33□□□□□ -1.08
TOD6YBL054W DEP1P31385 405 aa8.33□□□□□ -1.08
TOD6YBL054W UTP13Q05946 817 aaKnown RBP8.33□□□□□ -1.08
TOD6YBL054W NPR3P38742 1146 aa8.32□□□□□ -1.08
TOD6YBL054W CCT5P40413 562 aaKnown RBP8.32□□□□□ -1.08
TOD6YBL054W BDP1P46678 594 aa8.32□□□□□ -1.08
TOD6YBL054W DPS1P04802 557 aaKnown RBP8.31□□□□□ -1.08
TOD6YBL054W CWC22P53333 577 aaKnown RBP8.31□□□□□ -1.08
TOD6YBL054W RNT1Q02555 471 aa8.31□□□□□ -1.08
TOD6YBL054W RPL19AP0CX82 189 aaKnown RBP8.31□□□□□ -1.08
TOD6YBL054W RPL19BP0CX83 189 aaPredicted RBP8.31□□□□□ -1.08
TOD6YBL054W GCD7P32502 381 aaPredicted RBP8.31□□□□□ -1.08
TOD6YBL054W RAD24P32641 659 aa8.31□□□□□ -1.08
TOD6YBL054W ELM1P32801 640 aa8.31□□□□□ -1.08
TOD6YBL054W PEX14P53112 341 aa8.31□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms