RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 KANK1Q14678 1352 aa17.52■□□□□ 0.39
KCNMA1-289ENST00000640807 ESF1Q9H501 851 aaKnown RBP17.51■□□□□ 0.39
KCNMA1-289ENST00000640807 REREQ9P2R6 1566 aa17.49■□□□□ 0.39
KCNMA1-289ENST00000640807 SLC4A1APQ9BWU0 796 aaKnown RBP17.48■□□□□ 0.39
KCNMA1-289ENST00000640807 EIF2AK4Q9P2K8 1649 aaKnown RBP17.48■□□□□ 0.39
KCNMA1-289ENST00000640807 AGLP35573 1532 aa17.48■□□□□ 0.39
KCNMA1-289ENST00000640807 WASHC2CQ9Y4E1 1318 aa17.47■□□□□ 0.39
KCNMA1-289ENST00000640807 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
KCNMA1-289ENST00000640807 MPHOSPH9Q99550 1183 aa17.44■□□□□ 0.38
KCNMA1-289ENST00000640807 CCER1Q8TC90 406 aaPredicted RBP17.43■□□□□ 0.38
KCNMA1-289ENST00000640807 PKD2Q13563 968 aa17.4■□□□□ 0.38
KCNMA1-289ENST00000640807 UNC13BO14795 1591 aa17.4■□□□□ 0.38
KCNMA1-289ENST00000640807 RNF17Q9BXT8 1623 aaKnown RBP17.4■□□□□ 0.38
KCNMA1-289ENST00000640807 BCORL1Q5H9F3 1711 aa17.4■□□□□ 0.38
KCNMA1-289ENST00000640807 PRDM15P57071 1507 aaPredicted RBP17.38■□□□□ 0.37
KCNMA1-289ENST00000640807 DEPDC5O75140 1603 aa17.38■□□□□ 0.37
KCNMA1-289ENST00000640807 FAM135AQ9P2D6 1515 aa17.38■□□□□ 0.37
KCNMA1-289ENST00000640807 SIGLEC1Q9BZZ2 1709 aa17.38■□□□□ 0.37
KCNMA1-289ENST00000640807 DHX57Q6P158 1386 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-289ENST00000640807 PZPP20742 1482 aa17.36■□□□□ 0.37
KCNMA1-289ENST00000640807 KDM5DQ9BY66 1539 aa17.36■□□□□ 0.37
KCNMA1-289ENST00000640807 MROH1Q8NDA8 1641 aa17.36■□□□□ 0.37
KCNMA1-289ENST00000640807 FOXD1Q16676 465 aa17.36■□□□□ 0.37
KCNMA1-289ENST00000640807 IQGAP3Q86VI3 1631 aa17.34■□□□□ 0.37
KCNMA1-289ENST00000640807 CNTLNQ9NXG0 1405 aa17.33■□□□□ 0.37
KCNMA1-289ENST00000640807 PLPPR3Q6T4P5 718 aa17.33■□□□□ 0.37
KCNMA1-289ENST00000640807 ABCC3O15438 1527 aa17.33■□□□□ 0.36
KCNMA1-289ENST00000640807 VWDEQ8N2E2 1590 aa17.32■□□□□ 0.36
KCNMA1-289ENST00000640807 CEP152O94986 1710 aa17.3■□□□□ 0.36
KCNMA1-289ENST00000640807 LMTK2Q8IWU2 1503 aa17.3■□□□□ 0.36
KCNMA1-289ENST00000640807 ZMYM3Q14202 1370 aa17.3■□□□□ 0.36
KCNMA1-289ENST00000640807 TET3O43151 1660 aa17.29■□□□□ 0.36
KCNMA1-289ENST00000640807 ZC3H13Q5T200 1668 aaKnown RBP17.29■□□□□ 0.36
KCNMA1-289ENST00000640807 CLTCQ00610 1675 aaKnown RBP17.28■□□□□ 0.36
KCNMA1-289ENST00000640807 EFCAB6Q5THR3 1501 aa17.27■□□□□ 0.36
KCNMA1-289ENST00000640807 NPATQ14207 1427 aa17.27■□□□□ 0.36
KCNMA1-289ENST00000640807 ARHGAP31Q2M1Z3 1444 aa17.26■□□□□ 0.35
KCNMA1-289ENST00000640807 CEBPAP49715 358 aaPredicted RBP17.26■□□□□ 0.35
KCNMA1-289ENST00000640807 CLSPNQ9HAW4 1339 aa17.26■□□□□ 0.35
KCNMA1-289ENST00000640807 CFAP65Q6ZU64 1925 aaKnown RBP17.26■□□□□ 0.35
KCNMA1-289ENST00000640807 FBXO31Q5XUX0 539 aaPredicted RBP17.26■□□□□ 0.35
KCNMA1-289ENST00000640807 FER1L4A9Z1Z3 1794 aa17.26■□□□□ 0.35
KCNMA1-289ENST00000640807 RPRD2Q5VT52 1461 aaKnown RBP17.25■□□□□ 0.35
KCNMA1-289ENST00000640807 CAMSAP1Q5T5Y3 1602 aa17.25■□□□□ 0.35
KCNMA1-289ENST00000640807 NEUROD1Q13562 356 aa17.25■□□□□ 0.35
KCNMA1-289ENST00000640807 MADDQ8WXG6 1647 aa17.24■□□□□ 0.35
KCNMA1-289ENST00000640807 ANKRD30BQ9BXX2 1392 aa17.23■□□□□ 0.35
KCNMA1-289ENST00000640807 E9PCH4 1651 aa17.23■□□□□ 0.35
KCNMA1-289ENST00000640807 ADAMTSL3P82987 1691 aa17.22■□□□□ 0.35
KCNMA1-289ENST00000640807 SIN3AQ96ST3 1273 aa17.22■□□□□ 0.35
KCNMA1-289ENST00000640807 CCDC144AA2RUR9 1427 aa17.21■□□□□ 0.35
KCNMA1-289ENST00000640807 RIMS1Q86UR5 1692 aaKnown RBP17.21■□□□□ 0.35
KCNMA1-289ENST00000640807 CHGAP10645 457 aaKnown RBP17.19■□□□□ 0.34
KCNMA1-289ENST00000640807 SLC52A1Q9NWF4 448 aa17.19■□□□□ 0.34
KCNMA1-289ENST00000640807 MROH2AA6NES4 1674 aa17.19■□□□□ 0.34
KCNMA1-289ENST00000640807 KDM4FA0A1W2PPD8 638 aa17.19■□□□□ 0.34
KCNMA1-289ENST00000640807 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
KCNMA1-289ENST00000640807 PTPRTO14522 1441 aa17.18■□□□□ 0.34
KCNMA1-289ENST00000640807 ERVK-7P63135 1459 aa17.18■□□□□ 0.34
KCNMA1-289ENST00000640807 TNRQ92752 1358 aa17.17■□□□□ 0.34
KCNMA1-289ENST00000640807 NOS1P29475 1434 aa17.17■□□□□ 0.34
KCNMA1-289ENST00000640807 PLA2R1Q13018 1463 aa17.17■□□□□ 0.34
KCNMA1-289ENST00000640807 PTPRMP28827 1452 aa17.16■□□□□ 0.34
KCNMA1-289ENST00000640807 IDI1Q13907 227 aa17.15■□□□□ 0.34
KCNMA1-289ENST00000640807 SPHKAPQ2M3C7 1700 aa17.15■□□□□ 0.34
KCNMA1-289ENST00000640807 C3P01024 1663 aa17.14■□□□□ 0.33
KCNMA1-289ENST00000640807 PREX1Q8TCU6 1659 aa17.14■□□□□ 0.33
KCNMA1-289ENST00000640807 TRPM2O94759 1503 aa17.14■□□□□ 0.33
KCNMA1-289ENST00000640807 RGL3Q3MIN7 710 aa17.14■□□□□ 0.33
KCNMA1-289ENST00000640807 SPATA31D1Q6ZQQ2 1576 aa17.12■□□□□ 0.33
KCNMA1-289ENST00000640807 TONSLQ96HA7 1378 aa17.12■□□□□ 0.33
KCNMA1-289ENST00000640807 ZNF326Q5BKZ1 582 aaKnown RBP17.12■□□□□ 0.33
KCNMA1-289ENST00000640807 SETD1BQ9UPS6 1966 aaKnown RBP17.1■□□□□ 0.33
KCNMA1-289ENST00000640807 UGGT1Q9NYU2 1555 aa17.1■□□□□ 0.33
KCNMA1-289ENST00000640807 SYNMO15061 1565 aa17.09■□□□□ 0.33
KCNMA1-289ENST00000640807 ZEB1P37275 1124 aaPredicted RBP17.08■□□□□ 0.32
KCNMA1-289ENST00000640807 CLTCL1P53675 1640 aa17.07■□□□□ 0.32
KCNMA1-289ENST00000640807 TIMELESSQ9UNS1 1208 aa17.07■□□□□ 0.32
KCNMA1-289ENST00000640807 NLRP1Q9C000 1473 aa17.07■□□□□ 0.32
KCNMA1-289ENST00000640807 L3MBTL2Q969R5 705 aa17.05■□□□□ 0.32
KCNMA1-289ENST00000640807 DCAF11Q8TEB1 546 aa17.05■□□□□ 0.32
KCNMA1-289ENST00000640807 KDM2AQ9Y2K7 1162 aa17.05■□□□□ 0.32
KCNMA1-289ENST00000640807 THEMISQ8N1K5 641 aaPredicted RBP17.04■□□□□ 0.32
KCNMA1-289ENST00000640807 UHRF1BP1Q6BDS2 1440 aa17.04■□□□□ 0.32
KCNMA1-289ENST00000640807 KIF1BO60333 1816 aa17.03■□□□□ 0.32
KCNMA1-289ENST00000640807 PIK3C2BO00750 1634 aa17.02■□□□□ 0.32
KCNMA1-289ENST00000640807 HDGFP51858 240 aaKnown RBP17.02■□□□□ 0.32
KCNMA1-289ENST00000640807 SPATA31E1Q6ZUB1 1445 aa17.02■□□□□ 0.32
KCNMA1-289ENST00000640807 RPGRIP1LQ68CZ1 1315 aa17.01■□□□□ 0.31
KCNMA1-289ENST00000640807 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
KCNMA1-289ENST00000640807 A2ML1A8K2U0 1454 aa17■□□□□ 0.31
KCNMA1-289ENST00000640807 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
KCNMA1-289ENST00000640807 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
KCNMA1-289ENST00000640807 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
KCNMA1-289ENST00000640807 ADGRB3O60242 1522 aa16.98■□□□□ 0.31
KCNMA1-289ENST00000640807 VGFO15240 615 aaPredicted RBP16.98■□□□□ 0.31
KCNMA1-289ENST00000640807 MYO3AQ8NEV4 1616 aa16.98■□□□□ 0.31
KCNMA1-289ENST00000640807 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.98■□□□□ 0.31
KCNMA1-289ENST00000640807 CEP170BQ9Y4F5 1589 aaPredicted RBP16.97■□□□□ 0.31
KCNMA1-289ENST00000640807 TMEM131LA2VDJ0 1609 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms